PISA does just this - download pdb to ebi server; let iyt cluster molecules
and read back the assembled fcoordinates - plus lots gf useful info..
Eleanor
On Feb 24 2012, David Shin wrote:
Hi Gloria,
It depends on if you mean hard as in thinking up a slick trick, or hard as
in maybe 20-30
Hello Gloria,
I usually let Coot display the nearest symmetry molecules (as CA) and save
those that fit: Option Save Symmetry Coordinates... and pick the
molecule to save.
Best regards, Daniel
--
Daniel Schlieper email: daniel.schlie...@tuxomania.net
Biochemische
Hello all,
We are solving a superstructure of a protein complex with 2 parts.
Built 6 of the first part and they are all sensibly stacked next to each other.
Then we read this into molrep as the fixed model and solved for the
second part.
The solution was found but the 6 for the second model are
Hi Gloria,
It depends on if you mean hard as in thinking up a slick trick, or hard as
in maybe 20-30 mins of tedious work. I had the same problem with 18 in the
ASM, where the solution had scattered models, but didn't want to think
about it, so just used pymol.
1) open the first model with the
Hi,
There is an option in the molrep interface (in the search parameters
tab) to output all models closest to the input coordinate file With a
bit of luck, that should do it.
Johan
On 24 February 2012 00:07, Gloria Borgstahl gborgst...@gmail.com wrote:
Hello all,
We are solving a
