Re: [ccp4bb] mtz/cif file for depostion

2024-02-12 Thread Marcin Wojdyr
Dear Gottfried, is there any error message when uploading I+/I- fails? Many entries in the PDB have only intensities (for example, 7bb9 has only I+/I-), so it must be possible unless something has changed recently. Best, Marcin On Mon, Feb 12, 2024 at 11:54 AM Palm, Gottfried < b793af054fc6-

Re: [ccp4bb] mtz/cif file for depostion

2024-02-12 Thread Palm, Gottfried
Dear all,   thanks to all who answered. Gemmi and uniqueify did not help, "Export MTZ" from the toolbar did. "Merge experimental data objects to MTZ" from "Export and Deposition" did not help me. I think, it's not the programs, though. The problem now seems to me the missing Fs. "Export MTZ" see

Re: [ccp4bb] mtz/cif file for depostion

2024-02-11 Thread Kay Diederichs
Dear Gottfried, after cad, you need to uniqueify -f FREER Hope this helps! Best wishes, Kay On Fri, 9 Feb 2024 18:54:25 +0100, Palm, Gottfried wrote: >Dear all, >  I have problems preparing my experimental data (XRD) for >deposition. I have two mtz files, which work well for refmac5, wit

Re: [ccp4bb] mtz/cif file for depostion

2024-02-10 Thread Boaz Shaanan
84105 Israel E-mail: bshaa...@bgu.ac.il From: CCP4 bulletin board on behalf of Palm, Gottfried <b793af054fc6-dmarc-requ...@jiscmail.ac.uk> Sent: Friday, February 9, 2024 7:54 PM To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] mtz/cif file for depostion De

Re: [ccp4bb] mtz/cif file for depostion

2024-02-09 Thread Jon Cooper
From your refmac refinement job in i2, this should give you the combined mtz? [test.jpg] Best wishes, Jon Cooper. jon.b.coo...@protonmail.com Sent with [Proton Mail](https://proton.me/) secure email. On Friday, 9 February 2024 at 17:54, Palm, Gottfried

Re: [ccp4bb] mtz/cif file for depostion

2024-02-09 Thread Jon Cooper
Hello, there's a way to export all the columns in one file, rather than trying to deposit two mini-mtz's. The problem is remembering how when I'm away from the computer. It's one of the export options that you find when digging around a bit. Maybe it needs a right-click on one of the icons - bit

[ccp4bb] mtz/cif file for depostion

2024-02-09 Thread Palm, Gottfried
Dear all,   I have problems preparing my experimental data (XRD) for deposition. I have two mtz files, which work well for refmac5, with an FREER column in one file and Iplus, SIGIplus, Iminus, SIGIminus columns in the second file. I merged them into one mtz file with cad (in ccp4i). The validati