Re: [ccp4bb] which software can calculate binding energy

2010-07-23 Thread Dirk Kostrewa
, July 22, 2010 1:51 PM *To:* CCP4BB@JISCMAIL.AC.UK *Subject:* [ccp4bb] which software can calculate binding energy Dear All I have been using the Autodock software for docking the drug candidate compounds into the receptor structures. I would like to calculate accurately the binding energy. Would

Re: [ccp4bb] which software can calculate binding energy

2010-07-23 Thread Eugene Krissinel
In addition to what was rightly said, the problem is actually on both, theoretical and experimental, ends. What is taken as experimental value is not very well defined, and figures may vary quite significantly, simply because enthalpy change depends on the precise chemical environment your protein

[ccp4bb] which software can calculate binding energy

2010-07-22 Thread WEI MIN
Dear All I have been using the Autodock software for docking the drug candidate compounds into the receptor structures. I would like to calculate accurately the binding energy. Would anyone introduce me a software? Any help would be greatly appreciated. Best Min

Re: [ccp4bb] which software can calculate binding energy

2010-07-22 Thread Greg Warren
Subject: [ccp4bb] which software can calculate binding energy Dear All I have been using the Autodock software for docking the drug candidate compounds into the receptor structures. I would like to calculate accurately the binding energy. Would anyone introduce me a software? Any help would