Re: [ccp4bb] To solve the problem of an extremely asymmetric

2020-12-09 Thread Rezaul Karim
Exactly. Without a picture of SEC profile it's even difficult to decipher the meaning of "extremely asymmetric peak shape". Beside that, one domain or multi-domain protein, extended N-term or C-term loops containing constructs, column, load (weight & vol) and flow rate - any one of these could

Re: [ccp4bb] To solve the problem of an extremely asymmetric peak shape obtained from gel filtration chromatography

2020-12-09 Thread Artem Evdokimov
Probably a good idea to share an image :) worth many words... Artem On Wed, Dec 9, 2020, 9:17 AM wrote: > Dear All > There is a 43kd protein purified via Ni-chelating affinity > chromatography, anion exchange chromatography and gel filtration > chromatography in sequence. However the

Re: [ccp4bb] To solve the problem of an extremely asymmetric peak shape obtained from gel filtration chromatography

2020-12-09 Thread Ross Robinson
It would be sensible to analyse the state of your purified protein further. * (SEC in reasonable salt conc containing buffer – this is standard practice) * Analytical ion exchange of purified protein - are there different states? * SEC (in reasonable buffer) in line with MALS – is

Re: [ccp4bb] To solve the problem of an extremely asymmetric peak shape obtained from gel filtration chromatography

2020-12-09 Thread Javier Gonzalez
Hello, I agree with Roger, you should definitely try to increase the salt concentration to get rid of non specific binding impurities. And if that doesn't work, you can try purifying your protein under denaturing conditions by adding one refolding step in the column. Good luck, Javier On Wed, Dec

Re: [ccp4bb] To solve the problem of an extremely asymmetric peak shape obtained from gel filtration chromatography

2020-12-09 Thread Roger Rowlett
Salt concentrations less than 100 mM can lead to nonspecific adsorption to the gel exclusion media, potentially leading to band broadening, and delayed elution. Overloading gel exclusion columns (more than 2-4% Vt) can also lead to elution band artifacts. Check these issues first. Roger Rowlett