GitHub user mhsaul opened a pull request: https://github.com/apache/beam/pull/4157
[BEAM-2774] Added loose failure mode to allow individual VCF record reads to fail Added configuration parameter `allow_malformed_records` that allows reads for records to be logged and returned as `MalformedVcfRecord` objects so that the pipeline can continue if some records are malformed. @chamikaramj, @jkff can you please take a look? You can merge this pull request into a Git repository by running: $ git pull https://github.com/mhsaul/beam vcf-record-loose-mode Alternatively you can review and apply these changes as the patch at: https://github.com/apache/beam/pull/4157.patch To close this pull request, make a commit to your master/trunk branch with (at least) the following in the commit message: This closes #4157 ---- commit b46a3e7e83af5e45d1dd520f22db5bb155f760b3 Author: Miles Saul <ms...@google.com> Date: 2017-11-21T19:30:16Z Added loose failure mode to allow individual VCF record reads to fail ---- ---