http://git-wip-us.apache.org/repos/asf/hbase-site/blob/d851cda6/devapidocs/src-html/org/apache/hadoop/hbase/regionserver/HStore.html
----------------------------------------------------------------------
diff --git 
a/devapidocs/src-html/org/apache/hadoop/hbase/regionserver/HStore.html 
b/devapidocs/src-html/org/apache/hadoop/hbase/regionserver/HStore.html
index c82bf55..172b7a3 100644
--- a/devapidocs/src-html/org/apache/hadoop/hbase/regionserver/HStore.html
+++ b/devapidocs/src-html/org/apache/hadoop/hbase/regionserver/HStore.html
@@ -1718,1082 +1718,1081 @@
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 <span class="sourceLineNo">1711</span>  @Override<a name="line.1711"></a>
 <span class="sourceLineNo">1712</span>  public boolean hasReferences() {<a 
name="line.1712"></a>
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reloadedStoreFiles = null;<a name="line.1713"></a>
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we need to ensure that: only when the atomic<a name="line.1714"></a>
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we can get all the complete store file list.<a name="line.1715"></a>
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name="line.1716"></a>
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-<span class="sourceLineNo">1718</span>      // Merge the current store files 
with compacted files here due to HBASE-20940.<a name="line.1718"></a>
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allStoreFiles = new ArrayList&lt;&gt;(getStorefiles());<a name="line.1719"></a>
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allStoreFiles.addAll(getCompactedFiles());<a name="line.1720"></a>
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-<span class="sourceLineNo">1727</span>  /**<a name="line.1727"></a>
-<span class="sourceLineNo">1728</span>   * getter for CompactionProgress 
object<a name="line.1728"></a>
-<span class="sourceLineNo">1729</span>   * @return CompactionProgress object; 
can be null<a name="line.1729"></a>
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getCompactionProgress() {<a name="line.1731"></a>
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this.storeEngine.getCompactor().getProgress();<a name="line.1732"></a>
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shouldPerformMajorCompaction() throws IOException {<a name="line.1736"></a>
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this.storeEngine.getStoreFileManager().getStorefiles()) {<a 
name="line.1737"></a>
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checks all over the place?<a name="line.1738"></a>
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name="line.1739"></a>
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Reader", sf);<a name="line.1740"></a>
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storeEngine.getCompactionPolicy().shouldPerformMajorCompaction(<a 
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this.storeEngine.getStoreFileManager().getStorefiles());<a name="line.1745"></a>
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Optional&lt;CompactionContext&gt; requestCompaction() throws IOException {<a 
name="line.1748"></a>
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requestCompaction(NO_PRIORITY, CompactionLifeCycleTracker.DUMMY, null);<a 
name="line.1749"></a>
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Optional&lt;CompactionContext&gt; requestCompaction(int priority,<a 
name="line.1752"></a>
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tracker, User user) throws IOException {<a name="line.1753"></a>
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if writes are disabled<a name="line.1754"></a>
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name="line.1755"></a>
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name="line.1756"></a>
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-<span class="sourceLineNo">1758</span>    // Before we do compaction, try to 
get rid of unneeded files to simplify things.<a name="line.1758"></a>
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name="line.1759"></a>
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storeEngine.createCompaction();<a name="line.1761"></a>
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null;<a name="line.1762"></a>
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name="line.1763"></a>
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name="line.1765"></a>
-<span class="sourceLineNo">1766</span>        // First, see if coprocessor 
would want to override selection.<a name="line.1766"></a>
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null) {<a name="line.1767"></a>
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candidatesForCoproc = compaction.preSelect(this.filesCompacting);<a 
name="line.1768"></a>
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getCoprocessorHost().preCompactSelection(this,<a name="line.1769"></a>
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tracker, user);<a name="line.1770"></a>
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name="line.1771"></a>
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normal file selection.<a name="line.1772"></a>
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CompactionRequestImpl(candidatesForCoproc));<a name="line.1773"></a>
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-<span class="sourceLineNo">1777</span>        // Normal case - coprocessor is 
not overriding file selection.<a name="line.1777"></a>
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{<a name="line.1778"></a>
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priority == Store.PRIORITY_USER;<a name="line.1779"></a>
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offPeakHours.isOffPeakHour() &amp;&amp;<a name="line.1780"></a>
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offPeakCompactionTracker.compareAndSet(false, true);<a name="line.1781"></a>
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compaction.select(this.filesCompacting, isUserCompaction,<a 
name="line.1783"></a>
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&amp;&amp; filesCompacting.isEmpty());<a name="line.1784"></a>
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name="line.1785"></a>
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name="line.1786"></a>
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offPeakCompactionTracker.set(false);<a name="line.1787"></a>
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name="line.1789"></a>
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compaction.hasSelection();<a name="line.1791"></a>
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!compaction.getRequest().isOffPeak()) {<a name="line.1792"></a>
-<span class="sourceLineNo">1793</span>            // Compaction policy doesn't 
want to take advantage of off-peak.<a name="line.1793"></a>
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offPeakCompactionTracker.set(false);<a name="line.1794"></a>
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null) {<a name="line.1797"></a>
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this.getCoprocessorHost().postCompactSelection(<a name="line.1798"></a>
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ImmutableList.copyOf(compaction.getRequest().getFiles()), tracker,<a 
name="line.1799"></a>
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user);<a name="line.1800"></a>
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-<span class="sourceLineNo">1802</span>        // Finally, we have the 
resulting files list. Check if we have any files at all.<a name="line.1802"></a>
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compaction.getRequest();<a name="line.1803"></a>
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selectedFiles = request.getFiles();<a name="line.1804"></a>
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name="line.1805"></a>
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name="line.1806"></a>
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addToCompactingFiles(selectedFiles);<a name="line.1809"></a>
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-<span class="sourceLineNo">1811</span>        // If we're enqueuing a major, 
clear the force flag.<a name="line.1811"></a>
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this.forceMajor &amp;&amp; !request.isMajor();<a name="line.1812"></a>
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-<span class="sourceLineNo">1814</span>        // Set common request 
properties.<a name="line.1814"></a>
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value supplied by caller or from store.<a name="line.1815"></a>
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Store.NO_PRIORITY) ? priority : getCompactPriority());<a name="line.1816"></a>
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request.setDescription(getRegionInfo().getRegionNameAsString(), 
getColumnFamilyName());<a name="line.1817"></a>
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name="line.1818"></a>
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name="line.1821"></a>
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name="line.1824"></a>
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LOG.debug(getRegionInfo().getEncodedName() + " - " + getColumnFamilyName()<a 
name="line.1825"></a>
-<span class="sourceLineNo">1826</span>          + ": Initiating " + 
(request.isMajor() ? "major" : "minor") + " compaction"<a name="line.1826"></a>
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(all files)" : ""));<a name="line.1827"></a>
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this.region.reportCompactionRequestStart(request.isMajor());<a 
name="line.1829"></a>
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name="line.1830"></a>
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-<span class="sourceLineNo">1832</span><a name="line.1832"></a>
-<span class="sourceLineNo">1833</span>  /** Adds the files to compacting 
files. filesCompacting must be locked. */<a name="line.1833"></a>
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addToCompactingFiles(Collection&lt;HStoreFile&gt; filesToAdd) {<a 
name="line.1834"></a>
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(CollectionUtils.isEmpty(filesToAdd)) {<a name="line.1835"></a>
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-<span class="sourceLineNo">1837</span>    }<a name="line.1837"></a>
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compact the same StoreFile twice.<a name="line.1838"></a>
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(!Collections.disjoint(filesCompacting, filesToAdd)) {<a name="line.1839"></a>
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"%s overlaps with %s", filesToAdd, filesCompacting);<a name="line.1840"></a>
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filesCompacting.addAll(filesToAdd);<a name="line.1842"></a>
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storeEngine.getStoreFileManager().getStoreFileComparator());<a 
name="line.1843"></a>
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throws IOException {<a name="line.1846"></a>
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(!conf.getBoolean("hbase.store.delete.expired.storefile", true)) return;<a 
name="line.1847"></a>
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(getColumnFamilyDescriptor().getMinVersions() &gt; 0) {<a name="line.1848"></a>
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file removal due to min version being {}",<a name="line.1849"></a>
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getColumnFamilyDescriptor().getMinVersions());<a name="line.1850"></a>
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getStoreFileTtl();<a name="line.1857"></a>
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storeEngine.getStoreFileManager().getUnneededFiles(<a name="line.1859"></a>
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EnvironmentEdgeManager.currentTime() - cfTtl, filesCompacting);<a 
name="line.1860"></a>
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addToCompactingFiles(delSfs);<a name="line.1861"></a>
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newFiles = Collections.emptyList(); // No new files.<a name="line.1872"></a>
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newFiles);<a name="line.1873"></a>
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newFiles);<a name="line.1874"></a>
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name="line.1875"></a>
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delSfs.size() + " unnecessary (expired) file(s) in "<a name="line.1876"></a>
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this.getRegionInfo().getRegionNameAsString()<a name="line.1877"></a>
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TraditionalBinaryPrefix.long2String(storeSize.get(), "", 1));<a 
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finishCompactionRequest(compaction.getRequest());<a name="line.1883"></a>
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this.region.reportCompactionRequestEnd(cr.isMajor(), cr.getFiles().size(), 
cr.getSize());<a name="line.1887"></a>
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offPeakCompactionTracker.set(false);<a name="line.1889"></a>
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filesCompacting.removeAll(cr.getFiles());<a name="line.1893"></a>
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storeFile.closeStoreFile(false);<a name="line.1911"></a>
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filesToReopen.add(name2File.get(kvs.getFilePath().getName()));<a 
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-<span class="sourceLineNo">2593</span>      } finally {<a name="line.2593"></a>
-<span class="sourceLineNo">2594</span>        lock.readLock().unlock();<a 
name="line.2594"></a>
-<span class="sourceLineNo">2595</span>      }<a name="line.2595"></a>
-<span class="sourceLineNo">2596</span>      if 
(CollectionUtils.isNotEmpty(copyCompactedfiles)) {<a name="line.2596"></a>
-<span class="sourceLineNo">2597</span>        
removeCompactedfiles(copyCompactedfiles, storeClosing);<a name="line.2597"></a>
-<span class="sourceLineNo">2598</span>      }<a name="line.2598"></a>
-<span class="sourceLineNo">2599</span>    } finally {<a name="line.2599"></a>
-<span class="sourceLineNo">2600</span>      archiveLock.unlock();<a 
name="line.2600"></a>
-<span class="sourceLineNo">2601</span>    }<a name="line.2601"></a>
-<span class="sourceLineNo">2602</span>  }<a name="line.2602"></a>
-<span class="sourceLineNo">2603</span><a name="line.2603"></a>
-<span class="sourceLineNo">2604</span>  /**<a name="line.2604"></a>
-<span class="sourceLineNo">2605</span>   * Archives and removes the compacted 
files<a name="line.2605"></a>
-<span class="sourceLineNo">2606</span>   * @param compactedfiles The compacted 
files in this store that are not active in reads<a name="line.2606"></a>
-<span class="sourceLineNo">2607</span>   */<a name="line.2607"></a>
-<span class="sourceLineNo">2608</span>  private void 
removeCompactedfiles(Collection&lt;HStoreFile&gt; compactedfiles, boolean 
storeClosing)<a name="line.2608"></a>
-<span class="sourceLineNo">2609</span>      throws IOException {<a 
name="line.2609"></a>
-<span class="sourceLineNo">2610</span>    final List&lt;HStoreFile&gt; 
filesToRemove = new ArrayList&lt;&gt;(compactedfiles.size());<a 
name="line.2610"></a>
-<span class="sourceLineNo">2611</span>    final List&lt;Long&gt; 
storeFileSizes = new ArrayList&lt;&gt;(compactedfiles.size());<a 
name="line.2611"></a>
-<span class="sourceLineNo">2612</span>    for (final HStoreFile file : 
compactedfiles) {<a name="line.2612"></a>
-<span class="sourceLineNo">2613</span>      synchronized (file) {<a 
name="line.2613"></a>
-<span class="sourceLineNo">2614</span>        try {<a name="line.2614"></a>
-<span class="sourceLineNo">2615</span>          StoreFileReader r = 
file.getReader();<a name="line.2615"></a>
-<span class="sourceLineNo">2616</span>          if (r == null) {<a 
name="line.2616"></a>
-<span class="sourceLineNo">2617</span>            LOG.debug("The file {} was 
closed but still not archived", file);<a name="line.2617"></a>
-<span class="sourceLineNo">2618</span>            // HACK: Temporarily re-open 
the reader so we can get the size of the file. Ideally,<a name="line.2618"></a>
-<span class="sourceLineNo">2619</span>            // we should know the size of

<TRUNCATED>

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