Howdy, I seem to be running into the same problem reported by other people with Coot showing a blank clashes window.
I'm using the official Coot 0.5.2 python-gtk2 binary on Fedora 10 with probe 2.12 and reduce 3.13. Probe/reduce seem to run correctly; I get a coot-molprobity output directory with files and their exit status is 0, but the dots are never drawn and the Molprobity Probe Clash Gaps window is blank with just a single OK button. An email in a similar thread from Bernhard Lohkamp on 11/18 suggested that if the window was blank, the version of probe was too old, but I don't see a more recent version. Any clues on what I'm doing wrong would be much appreciated. -ben -- Ben Eisenbraun Structural Biology Grid Harvard Medical School http://sbgrid.org http://hms.harvard.edu
