Re: [COOT] Coot-0.8-pre???

2014-02-11 Thread Joseph Noel
If this helps this is what appears at the bottom of the terminal window: sys:1: GtkWarning: Unable to find default local directory monitor type sys:1: GtkWarning: Could not find the icon 'application-x-shellscript'. The 'hicolor' theme was not found either, perhaps you need to install it. You can

[COOT] Coot-0.8-pre???

2014-02-11 Thread Joseph Noel
I've started installing the latest nightly builds of Coot that Bill Scott maintains. They go into /usr/local/bin/coot. It will open but the screen is white, if you move the window around on the Mac it seems to duplicate and worse, if you load coordinates or a map, nothing appears. I must have mi

Re: [COOT] symmetry operator style in new coot

2014-02-11 Thread Yong Wang
Hi Paul, Thanks for the explanation. Yes, it would be great if Coot can write out the operator in matrices when one writes out a symmetry-related molecule as the matrix form is easier to pass between different programs. Yong -Original Message- From: Paul Emsley [mailto:pems...@mrc-lmb

Re: [COOT] symmetry operator style in new coot

2014-02-11 Thread Paul Emsley
On 10/02/14 21:46, Yong Wang wrote: Dear Coot users, The symmetry operator in the new Coot (0.7.2) has a different style from that in the older version. For example, the current symmetry operator (based on the label) would have something like -X+Y,-X,Z+(1 1 0)&{0 1 0} and the saved coordinate