Re: [COOT] N-terminal acetylation

2017-06-08 Thread Paul Emsley
On 08/06/2017 03:26, Becker, Stefan wrote: Hi all, in the coot mail archive I found an instruction from 2013 for N-terminal acetylation: build ala, replace by ACE, edit restraints for ACE to group L-peptide and apply. The last step does not work, changing to L-peptide cannot be applied. Could

Re: [COOT] N-terminal acetylation

2017-06-08 Thread Jared Sampson
Hi Stefan - There's probably an all-Coot way to do this, but you might also want to check out PyTMs (https://pymolwiki.org/index.php/Pytms ), a PyMOL plugin that does PTMs. You can generate it there, then fit it to the density in Coot. Hope that helps.

[COOT] jLigand

2017-06-08 Thread Becker, Stefan
Hi all, I installed the newest version of ccp4 package using the setup manager. When I want to launch then jLigand I get the error message "Cannot parse the standard monomer library". We checked if all paths are correctly set and couldnĀ“t find any mistake. Also repeating the installation did no