Re: [COOT] Map rotation and translation

2022-01-26 Thread Paul Emsley
On 27/01/2022 01:13, Paul Emsley wrote: I would like to draw your attention to the following paper and the EMDA project by my colleagues, it is a cryo-EM map and model manipulation toolbox, maybe that has what you need: https://www.biorxiv.org/content/10.1101/2021.07.26.453750v2 This has

Re: [COOT] Map rotation and translation

2022-01-26 Thread Paul Emsley
On 26/01/2022 22:18, Helge Paternoga wrote: Dear all, Continuing from this topic over at the ChimeraX user list: http://plato.cgl.ucsf.edu/pipermail/chimerax-users/2022-January/003177.html I would like to ask if it is possible currently (or to introduce) the ability in Coot to rotate and tra

[COOT] Map rotation and translation

2022-01-26 Thread Helge Paternoga
Dear all, Continuing from this topic over at the ChimeraX user list: http://plato.cgl.ucsf.edu/pipermail/chimerax-users/2022-January/003177.html I would like to ask if it is possible currently (or to introduce) the ability in Coot to rotate and translate a cryo-EM map according to the output

Re: [COOT] refinement weight key binding

2022-01-26 Thread Philip Kiser
Thank you Paul for the clarification and for the key binding script! Best, Philip On Wed, Jan 26, 2022 at 10:20 AM Paul Emsley wrote: > > On 26/01/2022 13:20, Philip Kiser wrote: > > Hi Paul, > Thank you for the guidance. Usually, the auto weight feature works fine > for our projects, so it woul

Re: [COOT] refinement weight key binding

2022-01-26 Thread Paul Emsley
On 26/01/2022 13:20, Philip Kiser wrote: Hi Paul, Thank you for the guidance. Usually, the auto weight feature works fine for our projects, so it would be nice to be able to set the weight with the push of a button as opposed to always having to click in the Refine/Regularize control box. Hav

Re: [COOT] scripting with hot keys

2022-01-26 Thread Paul Emsley
On 26/01/2022 15:20, Lijun Liu wrote: Hi: Within coot interface, hitting "space" for next residue is handy. I would like to know if there is a way I can take this advantage to do something like go-to-next-Nth-residue by a customized Button or Hot-Key, since I am doing coot residue-by-residue

[COOT] scripting with hot keys

2022-01-26 Thread Lijun Liu
Hi: Within coot interface, hitting "space" for next residue is handy. I would like to know if there is a way I can take this advantage to do something like go-to-next-Nth-residue by a customized Button or Hot-Key, since I am doing coot residue-by-residue tracing a lot; for a good map and well-

Re: [COOT] refinement weight key binding

2022-01-26 Thread Philip Kiser
Hi Paul, Thank you for the guidance. Usually, the auto weight feature works fine for our projects, so it would be nice to be able to set the weight with the push of a button as opposed to always having to click in the Refine/Regularize control box. Having the command set up as a key binding would m