Dear Clemens,
The AME component is ‘non-polymer’. Therefore, you need to create a link
between your residue and AME. For example, if your residue type is ALA, the
instruction file for generating the link in AceDRG will be:
LINK: RES-NAME-1 ALA ATOM-NAME-1 C RES-NAME-2 AME ATOM-NAME-2 N BOND-TYPE
Dear All,
Coot has an entry in its ligand dictionary for AME (N-acetyl methionine). For a
N-acetylated protein, I want Coot to treat AME as "polypetide".
How is this done?
Thanks,
Clemens
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