[COOT] Strange coot crash on MacOS Ventura 13.1

2023-02-03 Thread vincent Chaptal
s version but I forgot the number, perhaps 0.9.8.4 (?) Any idea of what's going on? Thanks Vincent -- Vincent Chaptal, PhD Director of GdR APPICOM Drug Resistance and Membrane Proteins Lab MMSB -UMR5086 7 passage du Vercors 69007 LYON FRANCE +33 4 37 65 29 01 http://www.a

[COOT] add alternate residue range ?

2022-01-10 Thread vincent Chaptal
Hi, is it possible to add alternate conformation to a residue range, not just one residue? I have a loop that has 2 main conformations and I would like to model both as alt res for a 20 residues stretch. What would be the best way to do this? Thank you Vincent -- Vincent Chaptal, PhD

[COOT] Bug report - change chain ID crashes when model =2

2021-05-03 Thread vincent Chaptal
1 MODEL    1 ATOM  1  N   GLY 0  17.960  63.850  79.550  1.00  0.00 ATOM  2  H1  GLY 0  18.590  64.360  80.130  1.00  0.00 we are using coot 0.9.4, under wincoot standalone, or macOS downloaded via CCP4. Both build create the same problem. HTH Vincent -- Vincent Chap

Re: [COOT] Release 0.9.4.1 -> MacOSX 10.15?

2021-03-02 Thread vincent Chaptal
s & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/ -- Vincent Chaptal, PhD Director of GdR APPICOM Drug Resistance and Membrane Proteins Lab MMSB -UMR5086 7 passage du Vercors 69007 LYON FRANCE +33 4

[COOT] question/suggestion low resolution refinement

2009-09-28 Thread vincent Chaptal
Hi, we are refining a low resolution (3A) membrane protein using coot 0.6_pre2228. In alpha helical regions, coot in doing a very good job but we have more trouble in loops or kinks in helices. Typically, in those regions, we just have density for the main chain carbonyls and the CB of the side c