Re: [COOT] COOT on Ubunut / Intel HD graphis solved?

2014-09-23 Thread Marcin Wojdyr
And with Mesa 10.1.5 on Fedora. Anyone tested yet the workaround Paul just added, i.e. (set-use-stroke-characters 1) ? If it works for everyone I think in the CCP4 suite coot will have this option on by default on Linux. Marcin On 23 September 2014 13:02, Florian Sauer wrote: > Hallo Jan, > > y

Re: [COOT] COOT on Ubunut / Intel HD graphis solved?

2014-09-23 Thread Florian Sauer
Hallo Jan, yes the problem still exists with MESA 10.0.0 (on Ubuntu 13.10 / Intel HD 4000). OpenGL vendor string: Intel Open Source Technology Center OpenGL renderer string: Mesa DRI Intel(R) Ivybridge Mobile OpenGL core profile version string: 3.3 (Core Profile) Mesa 10.0.0 OpenGL core profile s

Re: [COOT] COOT on Ubunut / Intel HD graphis solved?

2014-09-23 Thread Jan Gebauer
Hi Marcin, is your COOT only slow when (atom) labels are shown or always? All the others: Has anyone tried a more recent MESA (10.x)? Regards, Jan Am 23.09.2014 um 12:59 schrieb Marcin Wojdyr: > Yes, the log says Ironlake (Arrandale), it's seems to be a bit older, > from 2010, according to > ht

Re: [COOT] COOT on Ubunut / Intel HD graphis solved?

2014-09-23 Thread Marcin Wojdyr
Yes, the log says Ironlake (Arrandale), it's seems to be a bit older, from 2010, according to http://en.wikipedia.org/wiki/List_of_Intel_graphics_processing_units In Diamond we also have RedHat 6 with the same Mesa. Computers with Intel HD4000 and HD4600 run coot very slowly. No idea why exactly a

Re: [COOT] COOT on Ubunut / Intel HD graphis solved?

2014-09-23 Thread Kay Diederichs
after posting, I additionally found out that the graphics are just called Intel HD Graphics but not HD3000 or HD4000. Kay

Re: [COOT] COOT on Ubunut / Intel HD graphis solved?

2014-09-23 Thread Kay Diederichs
On 09/20/2014 01:00 AM, COOT automatic digest system wrote: It may all depend on the version of Mesa. As for not affected RHEL, what's the output of glxinfo | grep OpenGL ? Marcin, I can confirm that coot runs without problems when labels are on the screen (no noticeable difference in the spe

Re: [COOT] COOT on Ubunut / Intel HD graphis solved?

2014-09-22 Thread Oliver Clarke
Hi, A temporary fix is to turn atom labelling upon recentering off (set_label_on_recentre_flag(0) in python) - all the atom info is shown in the bar below the graphics display anyway. Unfortunately there is no similar flag that I am aware of to turn off atom labels after refinement or other mod

Re: [COOT] COOT on Ubunut / Intel HD graphis solved?

2014-09-22 Thread Miguel Ortiz Lombardia
Le 19/09/14 17:40, Marcin Wojdyr a écrit : > It's affected. I don't think it's a distro-specific problem. Yep, same problem under Debian 8 (jessie) Sigh... Miguel

Re: [COOT] COOT on Ubunut / Intel HD graphis solved?

2014-09-19 Thread Kay Diederichs
I think coot on RHEL6 was running well with HD 3000 (not 4000 !) graphics - a Toshiba Portege 13" notebook - will check/report next week. Kay Am 20.09.14 um 01:00 schrieb COOT automatic digest system: >> Is this really the same problem (only slow with labels on)? Kay once >> > reported that RHEL

Re: [COOT] COOT on Ubunut / Intel HD graphis solved?

2014-09-19 Thread Marcin Wojdyr
On 18 September 2014 08:04, Jan Gebauer wrote: > Am 17.09.2014 um 17:59 schrieb Marcin Wojdyr: >> Some computers in Diamond running RHEL6 also have the slow-coot >> problem. Our IT even informed RedHat about it: >> Marcin >> > > Is this really the same problem (only slow with labels on)? Kay once

Re: [COOT] COOT on Ubunut / Intel HD graphis solved?

2014-09-17 Thread Ethan A Merritt
On Wednesday, 17 September, 2014 16:59:31 Marcin Wojdyr wrote: > On 17 September 2014 13:11, Paul Emsley wrote: > > On 17/09/14 10:01, Jan Gebauer wrote: > >> > >> Hi, > >> > >> regarding the problem COOT has with Intel HD cards on Ubuntu > >> (https://www.mail-archive.com/coot@jiscmail.ac.uk/msg0

Re: [COOT] COOT on Ubunut / Intel HD graphis solved?

2014-09-17 Thread Marcin Wojdyr
On 17 September 2014 13:11, Paul Emsley wrote: > On 17/09/14 10:01, Jan Gebauer wrote: >> >> Hi, >> >> regarding the problem COOT has with Intel HD cards on Ubuntu >> (https://www.mail-archive.com/coot@jiscmail.ac.uk/msg03454.html) , I >> wonder if there is a fix in the meantime. >> > > Me too. Ha

Re: [COOT] COOT on Ubunut / Intel HD graphis solved?

2014-09-17 Thread Sabuj Pattanayek
have you guys tried compiling the latest mesa from source and installing it into your system? I had to just do that for a bug I hit recently : wget ftp://ftp.freedesktop.org/pub/mesa/10.2.7/MesaLib-10.2.7.tar.bz2 tar jxvf MesaLib cd MesaLib sudo apt-get install build-essential sudo apt-get build-d

Re: [COOT] COOT on Ubunut / Intel HD graphis solved?

2014-09-17 Thread Paul Emsley
On 17/09/14 10:01, Jan Gebauer wrote: Hi, regarding the problem COOT has with Intel HD cards on Ubuntu (https://www.mail-archive.com/coot@jiscmail.ac.uk/msg03454.html) , I wonder if there is a fix in the meantime. Me too. Has anyone with service contract with Canonical and reported this prob

[COOT] COOT on Ubunut / Intel HD graphis solved?

2014-09-17 Thread Jan Gebauer
Hi, regarding the problem COOT has with Intel HD cards on Ubuntu (https://www.mail-archive.com/coot@jiscmail.ac.uk/msg03454.html) , I wonder if there is a fix in the meantime. Last year my students struggled with the "solution" of removing the labels every time they clicked somewhere. Even with t