Re: [COOT] Making bond

2022-08-08 Thread Paul Emsley
On 09/08/2022 02:40, Cryo EM wrote: Hi everyone, In one my PDBs, I see that there is a linkage break in ribonucleotides. Specifically one of the phospodiester bond seems to be broken and thus O3' needs to be bonded to P atom of next nucleotide. What is the easiest way to do this in coot ? Or

[COOT] Making bond

2022-08-08 Thread Cryo EM
Hi everyone, In one my PDBs, I see that there is a linkage break in ribonucleotides. Specifically one of the phospodiester bond seems to be broken and thus O3' needs to be bonded to P atom of next nucleotide. What is the easiest way to do this in coot ? Or any other software? I tried "make link" o