[COOT] Coot warning: export coords

2016-11-15 Thread zhujun
To whom it may concern, I'm using ccp4-7.0 package on an iMac to solve a crystal structure. Today I encountered a problem with coot. After I did some model fitting manually in coot and wanted to save the coordinates, coot showed the warning message "WARNING:: export coords: There was an error

Re: [COOT] WARNING:: Failed to find restraints for :CL:

2015-01-30 Thread Murpholino Peligro
Output from "coot --version-full" 0.8.1 (revision 5478) [with guile 1.8.8 embedded] [with python 2.7.8 embedded] Binary type: Linux-x86_64-ubuntu-14.04-python-gtk2 Builder_info: build-host: ubuntu1404 on: Mon 05 Jan 1248.39 GMT 2015 Mr. Emsley and Mr. Caldwell have the dictionaries from ccp4i. I d

Re: [COOT] WARNING:: Failed to find restraints for :CL:

2015-01-30 Thread Paul Emsley
On 30/01/15 18:14, Murpholino Peligro wrote: hello everybody! Hello Murpholino Peligro, I was just getting a better structure from the 193L.pdb with coot (Fetch PDB and map using EDS) Everything was ok,...but the last residue (129) could not be refined ...The warning that appeared was somet

Re: [COOT] WARNING:: Failed to find restraints for :CL:

2015-01-30 Thread Shane Caldwell
Hi, I'm running the same system as you, and took a look. I think it comes from where you're launching coot from, and whether or not coot can access the ccp4 library from that location. I usually launch coot from the terminal, but when I boot from the desktop icon and then fetch the EDS coords, I g

[COOT] WARNING:: Failed to find restraints for :CL:

2015-01-30 Thread Murpholino Peligro
hello everybody! I was just getting a better structure from the 193L.pdb with coot (Fetch PDB and map using EDS) Everything was ok,...but the last residue (129) could not be refined ...The warning that appeared was something like -> INFO:: check_dictionary_for_residues - problem... WARNING:: Fail

Re: [COOT] Warning

2013-04-30 Thread Paul Emsley
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[COOT] Warning

2013-04-30 Thread Webmaster
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