[cytoscape/cytoscape.js] 193c43: 3.17.1

2020-12-15 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: 193c4330f1bc895de4c5aa043428c0cd1986bf2c https://github.com/cytoscape/cytoscape.js/commit/193c4330f1bc895de4c5aa043428c0cd1986bf2c Author: Max Franz Date: 2020-12-15 (Tue, 15 Dec 2020

[cytoscape/cytoscape.js] b9e215: Build 3.17.1

2020-12-15 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: b9e215d81a4d64ee968bee912be07ed22acde284 https://github.com/cytoscape/cytoscape.js/commit/b9e215d81a4d64ee968bee912be07ed22acde284 Author: Max Franz Date: 2020-12-15 (Tue, 15 Dec 2020

[cytoscape/cytoscape.js]

2020-12-15 Thread 'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] 1cb7cd: Build 3.16.5

2020-12-15 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/3.16.x Home: https://github.com/cytoscape/cytoscape.js Commit: 1cb7cdea1506864c205021183c61913e845a2c7a https://github.com/cytoscape/cytoscape.js/commit/1cb7cdea1506864c205021183c61913e845a2c7a Author: Max Franz Date: 2020-12-15 (Tue, 15 Dec 2020

[cytoscape/cytoscape.js] ac42ec: Add 3.17.1 & 3.16.5 to the list of releases in the...

2020-12-15 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: ac42ec04cd348a0ce13e29699db66775de50b334 https://github.com/cytoscape/cytoscape.js/commit/ac42ec04cd348a0ce13e29699db66775de50b334 Author: Max Franz Date: 2020-12-15 (Tue, 15 Dec 2020

[cytoscape/cytoscape.js] 3eb8d9: Add 3.17.1 & 3.16.5 to the list of releases in the...

2020-12-15 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 3eb8d9734d1b237b5299253ef8f3e83b13327555 https://github.com/cytoscape/cytoscape.js/commit/3eb8d9734d1b237b5299253ef8f3e83b13327555 Author: Max Franz Date: 2020-12-15 (Tue, 15 Dec 2020

[cytoscape/cytoscape.js] 7c43e2: Bump highlight.js from 10.1.2 to 10.4.1

2020-12-15 Thread 'Max Franz' via cytoscape-cvs
https://github.com/cytoscape/cytoscape.js/commit/bd814efcc255507be53d6574ae6c59667a2e83e7 Author: Max Franz Date: 2020-12-15 (Tue, 15 Dec 2020) Changed paths: M package-lock.json Log Message: --- Merge pull request #2793 from cytoscape/dependabot/npm_and_yarn/highlight.js-10.4.1

[cytoscape/cytoscape.js] 0a1515: Bump ini from 1.3.5 to 1.3.7

2020-12-15 Thread 'Max Franz' via cytoscape-cvs
(https://github.com/isaacs/ini/compare/v1.3.5...v1.3.7) Signed-off-by: dependabot[bot] Commit: 93b056ffbd155d834fd7de2075025068aa9b6f52 https://github.com/cytoscape/cytoscape.js/commit/93b056ffbd155d834fd7de2075025068aa9b6f52 Author: Max Franz Date: 2020-12-15 (Tue, 15 Dec 2020) C

[cytoscape/cytoscape.js] 3ccf23: Added background-image-smoothing property

2020-12-09 Thread 'Max Franz' via cytoscape-cvs
/6a11822e10e11c7d8148c3c96eb519655ac25ba8 Author: Max Franz Date: 2020-12-09 (Wed, 09 Dec 2020) Changed paths: M documentation/md/style.md M src/extensions/renderer/canvas/drawing-images.js M src/style/properties.js Log Message: --- Merge pull request #2794 from

[PathwayCommons/factoid] 92cc75: Add a catch condition that inserts a dummy article...

2020-12-09 Thread 'Max Franz' via cytoscape-cvs
schedule as configurable from docker-compose Commit: 39424e91205f63da601d2dbe9716b54ba917fe96 https://github.com/PathwayCommons/factoid/commit/39424e91205f63da601d2dbe9716b54ba917fe96 Author: Max Franz Date: 2020-12-09 (Wed, 09 Dec 2020) Changed paths: M docker/docker-compose.yml

[PathwayCommons/factoid] bcc98b: Avoid edge arrow overlap with labels #908

2020-12-07 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: bcc98b8d6646d963b13e54c83a1fbe6e959731f4 https://github.com/PathwayCommons/factoid/commit/bcc98b8d6646d963b13e54c83a1fbe6e959731f4 Author: Max Franz Date: 2020-12-02 (Wed, 02 Dec 2020

[PathwayCommons/factoid] 678f7e: In summary page use the old way of showing author ...

2020-12-07 Thread 'Max Franz' via cytoscape-cvs
: 784ff6b356756a4fdfd9ff067b5647dc6a985ce4 https://github.com/PathwayCommons/factoid/commit/784ff6b356756a4fdfd9ff067b5647dc6a985ce4 Author: Max Franz Date: 2020-12-07 (Mon, 07 Dec 2020) Changed paths: M src/client/components/editor/info-panel.js Log Message: --- Merge

[cytoscape/cytoscape.js] b65941: Deprecate the pie properties #2789

2020-12-02 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: b65941ea5451e243974d763d4122b657af6c61dd https://github.com/cytoscape/cytoscape.js/commit/b65941ea5451e243974d763d4122b657af6c61dd Author: Max Franz Date: 2020-12-02 (Wed, 02 Dec 2020

[cytoscape/cytoscape.js] 9d8b3c: Backport 3.16.x : `ele.removed()` typo re. #2771 #...

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Branch: refs/heads/3.16.x Home: https://github.com/cytoscape/cytoscape.js Commit: 9d8b3c8c528c2dbf5c8de3a0c308bb07b12e9125 https://github.com/cytoscape/cytoscape.js/commit/9d8b3c8c528c2dbf5c8de3a0c308bb07b12e9125 Author: Max Franz Date: 2020-12-02 (Wed, 02 Dec 2020

[cytoscape/cytoscape.js] 131d26: `ele.removed()` typo re. #2771 #2791

2020-12-02 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: 131d26d729efd1f912a48341834262c20572af92 https://github.com/cytoscape/cytoscape.js/commit/131d26d729efd1f912a48341834262c20572af92 Author: Max Franz Date: 2020-12-02 (Wed, 02 Dec 2020

[cytoscape/cytoscape.js] 17a32d: `ele.removed()` typo re. #2771 #2791

2020-12-02 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 17a32d74df6d00e6288e8bfb6b7fbd6994dcc2f6 https://github.com/cytoscape/cytoscape.js/commit/17a32d74df6d00e6288e8bfb6b7fbd6994dcc2f6 Author: Max Franz Date: 2020-12-02 (Wed, 02 Dec 2020

[PathwayCommons/factoid] bcc98b: Avoid edge arrow overlap with labels #908

2020-12-02 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/arrow-overlap Home: https://github.com/PathwayCommons/factoid Commit: bcc98b8d6646d963b13e54c83a1fbe6e959731f4 https://github.com/PathwayCommons/factoid/commit/bcc98b8d6646d963b13e54c83a1fbe6e959731f4 Author: Max Franz Date: 2020-12-02 (Wed, 02 Dec 2020

[PathwayCommons/factoid] 52086e: Automatic connection of researcher profiles #907

2020-12-02 Thread 'Max Franz' via cytoscape-cvs
-panel.js Log Message: --- Fixed linting errors Commit: bba32bf13d7abefd3dcd9b122634803597208b36 https://github.com/PathwayCommons/factoid/commit/bba32bf13d7abefd3dcd9b122634803597208b36 Author: Max Franz Date: 2020-12-02 (Wed, 02 Dec 2020) Changed paths: M src

[cytoscape/cytoscape.js] 6611ac: Update CONTRIBUTING.md

2020-11-30 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 6611acdf0b7764ec1579b0baa2e9a00d6d073b56 https://github.com/cytoscape/cytoscape.js/commit/6611acdf0b7764ec1579b0baa2e9a00d6d073b56 Author: Max Franz Date: 2020-11-30 (Mon, 30 Nov 2020

[cytoscape/cytoscape.js] 164313: Bump bl from 1.2.2 to 1.2.3

2020-11-30 Thread 'Max Franz' via cytoscape-cvs
ub.com/rvagg/bl/compare/v1.2.2...v1.2.3) Signed-off-by: dependabot[bot] Commit: 835e77a4214775b3e438ef8908f7411a06e40354 https://github.com/cytoscape/cytoscape.js/commit/835e77a4214775b3e438ef8908f7411a06e40354 Author: Max Franz Date: 2020-11-30 (Mon, 30 Nov 2020) Changed

[cytoscape/cytoscape.js] 3d036c: Bump highlight.js from 10.0.0 to 10.1.2

2020-11-30 Thread 'Max Franz' via cytoscape-cvs
https://github.com/cytoscape/cytoscape.js/commit/f7f290c005d7e21d52c28fee67b5fa69ebab73ac Author: Max Franz Date: 2020-11-30 (Mon, 30 Nov 2020) Changed paths: M package-lock.json Log Message: --- Merge pull request #2780 from cytoscape/dependabot/npm_and_yarn/highlight.js-10.1.2

[cytoscape/cytoscape.js] e55100: Allow function style mappers to depend on `cy.data...

2020-11-25 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: e55100677dbfb2e391bcb6c8248bd94ebe0b25ab https://github.com/cytoscape/cytoscape.js/commit/e55100677dbfb2e391bcb6c8248bd94ebe0b25ab Author: Max Franz Date: 2020-11-25 (Wed, 25 Nov 2020

[cytoscape/cytoscape.js] 9b82cf: Allow `options.data` to be set for graph-level dat...

2020-11-25 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 9b82cf62587286f74c8484d7e660190bbb90b66a https://github.com/cytoscape/cytoscape.js/commit/9b82cf62587286f74c8484d7e660190bbb90b66a Author: Max Franz Date: 2020-11-25 (Wed, 25 Nov 2020

[cytoscape/cytoscape.js] d1b20a: Backport 3.16.x : Ensure that the style is clean b...

2020-11-25 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/3.16.x Home: https://github.com/cytoscape/cytoscape.js Commit: d1b20aa40f9b17fece3a7fd8a3626c0c0b6d6361 https://github.com/cytoscape/cytoscape.js/commit/d1b20aa40f9b17fece3a7fd8a3626c0c0b6d6361 Author: Max Franz Date: 2020-11-25 (Wed, 25 Nov 2020

[cytoscape/cytoscape.js] cb69d2: Ensure that the style is clean before the renderer...

2020-11-25 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: cb69d2351611d6bc3424ffc2f6efba70d7e8f5cc https://github.com/cytoscape/cytoscape.js/commit/cb69d2351611d6bc3424ffc2f6efba70d7e8f5cc Author: Max Franz Date: 2020-11-25 (Wed, 25 Nov 2020

[cytoscape/cytoscape.js] 5e3628: Ensure that the style is clean before the renderer...

2020-11-25 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: 5e362893587cccfe97b1f8c447344cf43a1455d4 https://github.com/cytoscape/cytoscape.js/commit/5e362893587cccfe97b1f8c447344cf43a1455d4 Author: Max Franz Date: 2020-11-25 (Wed, 25 Nov 2020

[PathwayCommons/factoid] 4f04a1: Extended biopax zip download service with id mappi...

2020-11-23 Thread 'Max Franz' via cytoscape-cvs
swagger documentation for biopax id mapping parameter. Commit: 53f40684ffe498b43d8c7a08c613021c5268d40c https://github.com/PathwayCommons/factoid/commit/53f40684ffe498b43d8c7a08c613021c5268d40c Author: Max Franz Date: 2020-11-23 (Mon, 23 Nov 2020) Changed paths: M src/model

[PathwayCommons/factoid] c1c494: Merge branch 'master' into release-0.10.0

2020-11-20 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/v0.13.0 Home: https://github.com/PathwayCommons/factoid Commit: c1c494f481f4a0b7eba40dc35829b59af9aa2d40 https://github.com/PathwayCommons/factoid/commit/c1c494f481f4a0b7eba40dc35829b59af9aa2d40 Author: Max Franz Date: 2020-09-11 (Fri, 11 Sep 2020

[PathwayCommons/factoid] 6d07f4: Read the paper link points to preprint

2020-11-20 Thread 'Max Franz' via cytoscape-cvs
) Changed paths: M src/client/components/home.js Log Message: --- Read the paper link points to preprint Commit: d1e98c2a813aacea65be5dfd9d47043d4ac9ccdc https://github.com/PathwayCommons/factoid/commit/d1e98c2a813aacea65be5dfd9d47043d4ac9ccdc Author: Max Franz Date

[PathwayCommons/factoid] 175d5a: Expose the EMAIL_RELPPRS_CONTACT as a env variable...

2020-11-19 Thread 'Max Franz' via cytoscape-cvs
: Max Franz Date: 2020-11-19 (Thu, 19 Nov 2020) Changed paths: M docker/docker-compose.yml Log Message: --- Merge pull request #903 from PathwayCommons/docker-expose-relpprs-email Expose the EMAIL_RELPPRS_CONTACT as a env variable in Docker. Compare: https://github.com

[cytoscape/cytoscape.js] 777aac: Updates

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/gh-pages Home: https://github.com/cytoscape/cytoscape.js Commit: 777aac3e29bd97d370c3aedd43ee909ee464b5db https://github.com/cytoscape/cytoscape.js/commit/777aac3e29bd97d370c3aedd43ee909ee464b5db Author: Max Franz Date: 2020-11-12 (Thu, 12 Nov 2020

[cytoscape/cytoscape.js]

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] cab58a: Build 3.17.0

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: cab58a1fd9ca80cf2cf8823457ce60be6c7d8100 https://github.com/cytoscape/cytoscape.js/commit/cab58a1fd9ca80cf2cf8823457ce60be6c7d8100 Author: Max Franz Date: 2020-11-12 (Thu, 12 Nov 2020

[cytoscape/cytoscape.js] b620da: Add layout-utils extension to docs

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: b620daa99d413877c18edd70102d454f10432f33 https://github.com/cytoscape/cytoscape.js/commit/b620daa99d413877c18edd70102d454f10432f33 Author: Max Franz Date: 2020-09-14 (Mon, 14 Sep 2020

[cytoscape/cytoscape.js] 265f08: Bump http-proxy from 1.18.0 to 1.18.1

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
https://github.com/cytoscape/cytoscape.js/commit/f58697942cd26cf053b1d2e263699e267215d7d8 Author: Max Franz Date: 2020-09-14 (Mon, 14 Sep 2020) Changed paths: M package-lock.json M package.json Log Message: --- Update package files to 3.17.0-unstable

[cytoscape/cytoscape.js] dacbf9: Remove postpublish target for 3.16.x branch

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/3.16.x Home: https://github.com/cytoscape/cytoscape.js Commit: dacbf9a9c8ef67bdd3740f7dbda8058061333022 https://github.com/cytoscape/cytoscape.js/commit/dacbf9a9c8ef67bdd3740f7dbda8058061333022 Author: Max Franz Date: 2020-11-12 (Thu, 12 Nov 2020

[cytoscape/cytoscape.js]

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js]

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] 5b1f1a: Updates

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/gh-pages Home: https://github.com/cytoscape/cytoscape.js Commit: 5b1f1aab4a619f1eefb7f10b99b34f6f5c63168e https://github.com/cytoscape/cytoscape.js/commit/5b1f1aab4a619f1eefb7f10b99b34f6f5c63168e Author: Max Franz Date: 2020-11-12 (Thu, 12 Nov 2020

[cytoscape/cytoscape.js] 79c13a: Build 3.16.4

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: 79c13af11adcbcf92dd23b4424e4a91261f2fc03 https://github.com/cytoscape/cytoscape.js/commit/79c13af11adcbcf92dd23b4424e4a91261f2fc03 Author: Max Franz Date: 2020-11-12 (Thu, 12 Nov 2020

[cytoscape/cytoscape.js] b5f466: Build 3.15.5

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/3.15.x Home: https://github.com/cytoscape/cytoscape.js Commit: b5f466f5b829f19c3f7abfd54887c2a512f7868d https://github.com/cytoscape/cytoscape.js/commit/b5f466f5b829f19c3f7abfd54887c2a512f7868d Author: Max Franz Date: 2020-11-12 (Thu, 12 Nov 2020

[cytoscape/cytoscape.js]

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
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[cytoscape/cytoscape.js] 11c023: List extension : cytoscape-mapbox-gl #2773

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 11c02363a673ef5b48202c1f75eefdfc5b95d028 https://github.com/cytoscape/cytoscape.js/commit/11c02363a673ef5b48202c1f75eefdfc5b95d028 Author: Max Franz Date: 2020-11-12 (Thu, 12 Nov 2020

[cytoscape/cytoscape.js] b6f7fe: Backport 3.15.x : Uncaught TypeError: Cannot read ...

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/3.15.x Home: https://github.com/cytoscape/cytoscape.js Commit: b6f7fe5a2a45297ef5d022bbd9fd01c6d107a777 https://github.com/cytoscape/cytoscape.js/commit/b6f7fe5a2a45297ef5d022bbd9fd01c6d107a777 Author: Max Franz Date: 2020-11-12 (Thu, 12 Nov 2020

[cytoscape/cytoscape.js] 326a9d: Short circuit when `b` is not defined (#2770)

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
xtensions/renderer/canvas/ele-texture-cache.js Log Message: --- Ensure element is not removed Commit: 727e98bd4db184102ac1f15bbc1bb2c340323c2d https://github.com/cytoscape/cytoscape.js/commit/727e98bd4db184102ac1f15bbc1bb2c340323c2d Author: Max Franz Date: 2020-11-12

[cytoscape/cytoscape.js] 19f3a0: Merge pull request #2771 from janhartmann/patch-1

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 19f3a02b1d23f8959a0c652d68bb6faf77ca51eb https://github.com/cytoscape/cytoscape.js/commit/19f3a02b1d23f8959a0c652d68bb6faf77ca51eb Author: Max Franz Date: 2020-11-12 (Thu, 12 Nov 2020

[cytoscape/cytoscape.js] eebc18: Add 3.17.0, 3.16.4, & 3.15.5 to the release list

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: eebc185803363dfa065bcc332dc5f1b9ef9bd4f0 https://github.com/cytoscape/cytoscape.js/commit/eebc185803363dfa065bcc332dc5f1b9ef9bd4f0 Author: Max Franz Date: 2020-11-12 (Thu, 12 Nov 2020

[cytoscape/cytoscape.js] 1f8f6e: Add 3.17.0, 3.16.4, & 3.15.5 to the release list

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 1f8f6ec5354793ee56e25e95b430ec9a5ca07858 https://github.com/cytoscape/cytoscape.js/commit/1f8f6ec5354793ee56e25e95b430ec9a5ca07858 Author: Max Franz Date: 2020-11-12 (Thu, 12 Nov 2020

[cytoscape/cytoscape.js] 0073d3: Soften the `style` bypass at element creation warn...

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: 0073d3672dc3438684b16209e73afa396299ae4d https://github.com/cytoscape/cytoscape.js/commit/0073d3672dc3438684b16209e73afa396299ae4d Author: Max Franz Date: 2020-11-12 (Thu, 12 Nov 2020

[cytoscape/cytoscape.js] 78849c: Soften the `style` bypass at element creation warn...

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 78849c0cc622b5615a1529fd596a817766b937d7 https://github.com/cytoscape/cytoscape.js/commit/78849c0cc622b5615a1529fd596a817766b937d7 Author: Max Franz Date: 2020-11-12 (Thu, 12 Nov 2020

[cytoscape/cytoscape.js]

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
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[PathwayCommons/factoid] ebbcdf: Provide the individual name parts (if they exist) ...

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
://github.com/PathwayCommons/factoid/commit/94a9bcdc0d447f9fe1c90b1d6a30d4e05485ac29 Author: Max Franz Date: 2020-11-12 (Thu, 12 Nov 2020) Changed paths: M src/server/routes/api/document/index.js M src/util/pubmed.js Log Message: --- Merge pull request #899 from PathwayCommons

[cytoscape/cytoscape.js]

2020-11-12 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/typescript Home: https://github.com/cytoscape/cytoscape.js -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to

[PathwayCommons/factoid] 52ce17: Related papers emails: strip out final period in t...

2020-11-11 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 52ce17cf396ff4945d8127ad6a399633013f9a60 https://github.com/PathwayCommons/factoid/commit/52ce17cf396ff4945d8127ad6a399633013f9a60 Author: Max Franz Date: 2020-11-11 (Wed, 11 Nov 2020

[PathwayCommons/factoid] 7fdf9f: Move util/dom and util/document

2020-11-10 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/iss858_move-email-server Home: https://github.com/PathwayCommons/factoid Commit: 7fdf9f2de5de346240cd319bc0bf21bf6db2212e https://github.com/PathwayCommons/factoid/commit/7fdf9f2de5de346240cd319bc0bf21bf6db2212e Author: Max Franz Date: 2020-11-10 (Tue, 10

[PathwayCommons/factoid] 715ede: Related papers notification

2020-11-10 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 715ede09df6219cec28ba2f54961d86a2a32bac1 https://github.com/PathwayCommons/factoid/commit/715ede09df6219cec28ba2f54961d86a2a32bac1 Author: Max Franz Date: 2020-10-28 (Wed, 28 Oct 2020

[PathwayCommons/factoid] 1e75e2: Remove the organism dropdown when there are no alt...

2020-11-10 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 1e75e29f015377fe759b393da5ce1b0f63b7ae3f https://github.com/PathwayCommons/factoid/commit/1e75e29f015377fe759b393da5ce1b0f63b7ae3f Author: Max Franz Date: 2020-11-10 (Tue, 10 Nov 2020

[PathwayCommons/factoid] 1e75e2: Remove the organism dropdown when there are no alt...

2020-11-10 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/org-dropdown-etc Home: https://github.com/PathwayCommons/factoid Commit: 1e75e29f015377fe759b393da5ce1b0f63b7ae3f https://github.com/PathwayCommons/factoid/commit/1e75e29f015377fe759b393da5ce1b0f63b7ae3f Author: Max Franz Date: 2020-11-10 (Tue, 10 Nov 2020

[PathwayCommons/factoid] 5526dd: Add interactions filter based on `isNovel()` and a...

2020-11-10 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/email-rel-pprs Home: https://github.com/PathwayCommons/factoid Commit: 5526dd7d789c0540c3d690a21e57de524f3a002c https://github.com/PathwayCommons/factoid/commit/5526dd7d789c0540c3d690a21e57de524f3a002c Author: Max Franz Date: 2020-11-10 (Tue, 10 Nov 2020

[PathwayCommons/factoid] b6623c: Use `logger` to remove linting warning in preparat...

2020-11-10 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/email-rel-pprs Home: https://github.com/PathwayCommons/factoid Commit: b6623cf93e3b0bdf1b798efc4d93c5b246bc2eec https://github.com/PathwayCommons/factoid/commit/b6623cf93e3b0bdf1b798efc4d93c5b246bc2eec Author: Max Franz Date: 2020-11-10 (Tue, 10 Nov 2020

[PathwayCommons/factoid] 6e972b: Add LICENSE file (MIT)

2020-11-04 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/iss893_license Home: https://github.com/PathwayCommons/factoid Commit: 6e972b289a9407f5be792a54ef8043ddcef6313d https://github.com/PathwayCommons/factoid/commit/6e972b289a9407f5be792a54ef8043ddcef6313d Author: Max Franz Date: 2020-11-04 (Wed, 04 Nov 2020

[PathwayCommons/factoid] e300e9: Remove the date from the carousel entries

2020-10-30 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: e300e9f7f47f80a67a0907126a64db6f35705460 https://github.com/PathwayCommons/factoid/commit/e300e9f7f47f80a67a0907126a64db6f35705460 Author: Max Franz Date: 2020-10-29 (Thu, 29 Oct 2020

[PathwayCommons/factoid] e300e9: Remove the date from the carousel entries

2020-10-30 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/carousel-rm-date Home: https://github.com/PathwayCommons/factoid Commit: e300e9f7f47f80a67a0907126a64db6f35705460 https://github.com/PathwayCommons/factoid/commit/e300e9f7f47f80a67a0907126a64db6f35705460 Author: Max Franz Date: 2020-10-29 (Thu, 29 Oct 2020

[PathwayCommons/factoid] d378c7: During bulk export skip the files where the conver...

2020-10-29 Thread 'Max Franz' via cytoscape-cvs
https://github.com/PathwayCommons/factoid/commit/ac70b70206ab37b3c98853b2992efdc0d3b35b25 Author: Max Franz Date: 2020-10-29 (Thu, 29 Oct 2020) Changed paths: M src/server/routes/api/document/export.js M src/util/document.js Log Message: --- Merge pull request #885 from

[PathwayCommons/factoid] 715ede: Related papers notification

2020-10-28 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/email-rel-pprs Home: https://github.com/PathwayCommons/factoid Commit: 715ede09df6219cec28ba2f54961d86a2a32bac1 https://github.com/PathwayCommons/factoid/commit/715ede09df6219cec28ba2f54961d86a2a32bac1 Author: Max Franz Date: 2020-10-28 (Wed, 28 Oct 2020

[cytoscape/cytoscape.js]

2020-10-28 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/tags/v3.16.3 Home: https://github.com/cytoscape/cytoscape.js -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to

[cytoscape/cytoscape.js] e5df11: Build 3.16.3

2020-10-28 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: e5df11a10eda560863daa9a77c60afb79ef38a57 https://github.com/cytoscape/cytoscape.js/commit/e5df11a10eda560863daa9a77c60afb79ef38a57 Author: Max Franz Date: 2020-10-28 (Wed, 28 Oct 2020

[cytoscape/cytoscape.js] 51681f: Updates

2020-10-28 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/gh-pages Home: https://github.com/cytoscape/cytoscape.js Commit: 51681f31342ff6183c4febe4e49d4635df65ac7a https://github.com/cytoscape/cytoscape.js/commit/51681f31342ff6183c4febe4e49d4635df65ac7a Author: Max Franz Date: 2020-10-28 (Wed, 28 Oct 2020

[cytoscape/cytoscape.js]

2020-10-28 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/tags/v3.15.4 Home: https://github.com/cytoscape/cytoscape.js -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to

[cytoscape/cytoscape.js] e9e16a: Disable docs publishing for 3.15.x

2020-10-28 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/3.15.x Home: https://github.com/cytoscape/cytoscape.js Commit: e9e16a99afb632d01b2c854a54c2bd83fd64706c https://github.com/cytoscape/cytoscape.js/commit/e9e16a99afb632d01b2c854a54c2bd83fd64706c Author: Max Franz Date: 2020-10-28 (Wed, 28 Oct 2020

[cytoscape/cytoscape.js] b06b3c: Add 3.15.4 and 3.16.3 to the list of releases in t...

2020-10-28 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: b06b3c3b0318d545427a220ff040cebf0bdffbc2 https://github.com/cytoscape/cytoscape.js/commit/b06b3c3b0318d545427a220ff040cebf0bdffbc2 Author: Max Franz Date: 2020-10-28 (Wed, 28 Oct 2020

[cytoscape/cytoscape.js] 613b00: Add 3.15.4 and 3.16.3 to the list of releases in t...

2020-10-28 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: 613b00cd07143d4ef96a1c8fadc7aed4b0c26e37 https://github.com/cytoscape/cytoscape.js/commit/613b00cd07143d4ef96a1c8fadc7aed4b0c26e37 Author: Max Franz Date: 2020-10-28 (Wed, 28 Oct 2020

[cytoscape/cytoscape.js] f34b8c: Merge pull request #2762 from msalihaltun/bugfix/e...

2020-10-28 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/3.15.x Home: https://github.com/cytoscape/cytoscape.js Commit: f34b8c3ef036ddd248f365b553799897c1f3671b https://github.com/cytoscape/cytoscape.js/commit/f34b8c3ef036ddd248f365b553799897c1f3671b Author: Max Franz Date: 2020-10-28 (Wed, 28 Oct 2020

[cytoscape/cytoscape.js] 8e6758: Merge pull request #2764 from blazespinnaker/unstable

2020-10-28 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: 8e67584ee9d5ff7876eae836ecb29d908b4d603e https://github.com/cytoscape/cytoscape.js/commit/8e67584ee9d5ff7876eae836ecb29d908b4d603e Author: Max Franz Date: 2020-10-28 (Wed, 28 Oct 2020

[cytoscape/cytoscape.js] 6bc290: Allow ele.panify() to work with compound nodes #2759

2020-10-28 Thread 'Max Franz' via cytoscape-cvs
/e6d9b655fc2f76111f3d49657ec61f60a192e313 Author: Max Franz Date: 2020-10-28 (Wed, 28 Oct 2020) Changed paths: M src/extensions/renderer/base/load-listeners.js Log Message: --- Merge pull request #2764 from blazespinnaker/unstable Allow eles.panify() to work with compound nodes #2759 Compare: https

[PathwayCommons/factoid] 8f63b3: Friendlier message for editors submit

2020-10-26 Thread 'Max Franz' via cytoscape-cvs
/c3d3712d24d244ff8219868661e097234f81a4f5 Author: Max Franz Date: 2020-10-26 (Mon, 26 Oct 2020) Changed paths: M src/client/components/tasks.js M src/styles/tasks.css Log Message: --- Merge pull request #884 from PathwayCommons/iss861_warnings-nicer Friendlier message for editor Task warnings

[PathwayCommons/factoid] 1c1a22: Fixed a typo in effect of deubiquitination interac...

2020-10-21 Thread 'Max Franz' via cytoscape-cvs
/6a0c27a9065f2d7d30e3b5a0bded29446a3f Author: Max Franz Date: 2020-10-21 (Wed, 21 Oct 2020) Changed paths: M src/model/element/interaction-type/deubiquitination.js Log Message: --- Merge pull request #883 from PathwayCommons/deubiquitination_typo Fixed a typo in effect of deubiquitination

[cytoscape/cytoscape.js] 7416be: Merge pull request #2763 from joliroot/all-benchmarks

2020-10-19 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 7416be1251ec9521c997cdee4bafc601b064c37b https://github.com/cytoscape/cytoscape.js/commit/7416be1251ec9521c997cdee4bafc601b064c37b Author: Max Franz Date: 2020-10-19 (Mon, 19 Oct 2020

[cytoscape/cytoscape.js] 3a399e: npm run benchmark runs all benchmarks

2020-10-19 Thread 'Max Franz' via cytoscape-cvs
paths: M package.json Log Message: --- npm run benchmark runs all benchmarks Commit: 20a651d492ea21dd2cdf594c3b4147bfaedbaaf4 https://github.com/cytoscape/cytoscape.js/commit/20a651d492ea21dd2cdf594c3b4147bfaedbaaf4 Author: Max Franz Date: 2020-10-19 (Mon, 19

[cytoscape/cytoscape.js] ea1adc: Merge pull request #2762 from msalihaltun/bugfix/e...

2020-10-19 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: ea1adca45c6a3e9316def93321f0456c1b17fbc8 https://github.com/cytoscape/cytoscape.js/commit/ea1adca45c6a3e9316def93321f0456c1b17fbc8 Author: Max Franz Date: 2020-10-19 (Mon, 19 Oct 2020

[cytoscape/cytoscape.js] 985c9a: Change ellipsis label logic

2020-10-19 Thread 'Max Franz' via cytoscape-cvs
will apply since we know we are going to be using ellipsis (label doesn't fit). Commit: 5742ae1c46b1ffcff19610494180473341af01bb https://github.com/cytoscape/cytoscape.js/commit/5742ae1c46b1ffcff19610494180473341af01bb Author: Max Franz Date: 2020-10-19 (Mon, 19 Oct 2020) Changed paths

[cytoscape/cytoscape.js] e45bdf: Add `cosep` layout to the docs

2020-10-14 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: e45bdf8889441b990d75ecd8259ade2e480bb1be https://github.com/cytoscape/cytoscape.js/commit/e45bdf8889441b990d75ecd8259ade2e480bb1be Author: Max Franz Date: 2020-10-14 (Wed, 14 Oct 2020

[cytoscape/cytoscape.js] b0c928: Add `cosep` layout to the docs

2020-10-14 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: b0c9286450318301ca394fb8dbeed87a1328350d https://github.com/cytoscape/cytoscape.js/commit/b0c9286450318301ca394fb8dbeed87a1328350d Author: Max Franz Date: 2020-10-14 (Wed, 14 Oct 2020

[cytoscape/cytoscape.js] ee9c25: Add support for line-opacity #2717

2020-10-14 Thread 'Max Franz' via cytoscape-cvs
/commit/f02c34b25d3fbad06a0c82f2587c6903d4335007 Author: Max Franz Date: 2020-10-14 (Wed, 14 Oct 2020) Changed paths: M documentation/md/style.md M src/extensions/renderer/canvas/drawing-edges.js M src/style/properties.js Log Message: --- Merge pull request #2760

[PathwayCommons/factoid] 74ceb1: Use smooth scroll polyfill for the carousel on Safari

2020-10-13 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 74ceb106f67faec335b601d2e5b487a7630c9c51 https://github.com/PathwayCommons/factoid/commit/74ceb106f67faec335b601d2e5b487a7630c9c51 Author: Max Franz Date: 2020-10-13 (Tue, 13 Oct 2020

[PathwayCommons/factoid] 0388c7: Allow long interaction strings to be readable in t...

2020-10-13 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/carousel-misc-tweaks Home: https://github.com/PathwayCommons/factoid Commit: 0388c7e2e7cc9f4cc1b8eadc912ac6912c05cf52 https://github.com/PathwayCommons/factoid/commit/0388c7e2e7cc9f4cc1b8eadc912ac6912c05cf52 Author: Max Franz Date: 2020-10-13 (Tue, 13 Oct

[PathwayCommons/factoid] 74ceb1: Use smooth scroll polyfill for the carousel on Safari

2020-10-13 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/carousel-misc-tweaks Home: https://github.com/PathwayCommons/factoid Commit: 74ceb106f67faec335b601d2e5b487a7630c9c51 https://github.com/PathwayCommons/factoid/commit/74ceb106f67faec335b601d2e5b487a7630c9c51 Author: Max Franz Date: 2020-10-13 (Tue, 13 Oct

[PathwayCommons/factoid] 6f1885: Allow for excluding entities in doc organism counts

2020-10-09 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 6f188549f20ca283f9fc0f198081059f353f56a8 https://github.com/PathwayCommons/factoid/commit/6f188549f20ca283f9fc0f198081059f353f56a8 Author: Max Franz Date: 2020-10-09 (Fri, 09 Oct 2020

[PathwayCommons/factoid] 6f1885: Allow for excluding entities in doc organism counts

2020-10-09 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/org-dropdown-misc Home: https://github.com/PathwayCommons/factoid Commit: 6f188549f20ca283f9fc0f198081059f353f56a8 https://github.com/PathwayCommons/factoid/commit/6f188549f20ca283f9fc0f198081059f353f56a8 Author: Max Franz Date: 2020-10-09 (Fri, 09 Oct 2020

[PathwayCommons/factoid] 605163: More aggressive Indra retries

2020-10-09 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 605163b93797984bbae27f7b20c114c9aff14b92 https://github.com/PathwayCommons/factoid/commit/605163b93797984bbae27f7b20c114c9aff14b92 Author: Max Franz Date: 2020-10-08 (Thu, 08 Oct 2020

[PathwayCommons/factoid] 4def92: More salient organism in entity grounding popover

2020-10-08 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/organism-validation Home: https://github.com/PathwayCommons/factoid Commit: 4def92b647b003cc1fdecaa2ffeb7442e820a01b https://github.com/PathwayCommons/factoid/commit/4def92b647b003cc1fdecaa2ffeb7442e820a01b Author: Max Franz Date: 2020-10-08 (Thu, 08 Oct

[PathwayCommons/factoid] 4b70ba: Take into account `lastEditedDate` in the document...

2020-10-08 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 4b70bad414ba3f9c9d7cf1bb3bdc536e6d1ec984 https://github.com/PathwayCommons/factoid/commit/4b70bad414ba3f9c9d7cf1bb3bdc536e6d1ec984 Author: Max Franz Date: 2020-10-08 (Thu, 08 Oct 2020

[PathwayCommons/factoid] 605163: More aggressive Indra retries

2020-10-08 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/indra-more-retries-851 Home: https://github.com/PathwayCommons/factoid Commit: 605163b93797984bbae27f7b20c114c9aff14b92 https://github.com/PathwayCommons/factoid/commit/605163b93797984bbae27f7b20c114c9aff14b92 Author: Max Franz Date: 2020-10-08 (Thu, 08 Oct

[PathwayCommons/factoid] e370d3: Remove logs

2020-10-08 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/clear-img-cache-851 Home: https://github.com/PathwayCommons/factoid Commit: e370d3392bf09eeb14357418e2b52bf9fe60d282 https://github.com/PathwayCommons/factoid/commit/e370d3392bf09eeb14357418e2b52bf9fe60d282 Author: Max Franz Date: 2020-10-08 (Thu, 08 Oct

[PathwayCommons/factoid] 4b70ba: Take into account `lastEditedDate` in the document...

2020-10-08 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/clear-img-cache-851 Home: https://github.com/PathwayCommons/factoid Commit: 4b70bad414ba3f9c9d7cf1bb3bdc536e6d1ec984 https://github.com/PathwayCommons/factoid/commit/4b70bad414ba3f9c9d7cf1bb3bdc536e6d1ec984 Author: Max Franz Date: 2020-10-08 (Thu, 08 Oct

[cytoscape/cytoscape.js] 806ab7: Updates

2020-10-07 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/gh-pages Home: https://github.com/cytoscape/cytoscape.js Commit: 806ab738b3ff75561bfa55e51928d4c816cdeede https://github.com/cytoscape/cytoscape.js/commit/806ab738b3ff75561bfa55e51928d4c816cdeede Author: Max Franz Date: 2020-10-07 (Wed, 07 Oct 2020

[cytoscape/cytoscape.js]

2020-10-07 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/tags/v3.16.2 Home: https://github.com/cytoscape/cytoscape.js -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to

[cytoscape/cytoscape.js] 3aea50: Build 3.16.2

2020-10-07 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: 3aea50be00202a4bcf60d8e9eb527f80b5bded68 https://github.com/cytoscape/cytoscape.js/commit/3aea50be00202a4bcf60d8e9eb527f80b5bded68 Author: Max Franz Date: 2020-10-07 (Wed, 07 Oct 2020

[cytoscape/cytoscape.js] 46b11e: Add 3.16.2 to the list of releases in the docs

2020-10-07 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: 46b11e06cedb4b9babf17aa64a2fbfd9c81922b3 https://github.com/cytoscape/cytoscape.js/commit/46b11e06cedb4b9babf17aa64a2fbfd9c81922b3 Author: Max Franz Date: 2020-10-07 (Wed, 07 Oct 2020

[cytoscape/cytoscape.js] 5f60db: Add 3.16.2 to the list of releases in the docs

2020-10-07 Thread 'Max Franz' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 5f60db5443424f4617d20c86c4361775b3babeed https://github.com/cytoscape/cytoscape.js/commit/5f60db5443424f4617d20c86c4361775b3babeed Author: Max Franz Date: 2020-10-07 (Wed, 07 Oct 2020

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