[cytoscape/cytoscape.js] edc414: chore(package): update cpy-cli to version 3.0.0

2019-12-10 Thread Max Franz
ge-lock.json Commit: bb6de93328f1b305065ad2f778fe5feabdf0c0f5 https://github.com/cytoscape/cytoscape.js/commit/bb6de93328f1b305065ad2f778fe5feabdf0c0f5 Author: Max Franz Date: 2019-12-10 (Tue, 10 Dec 2019) Changed paths: M package-lock.json M package.json

[PathwayCommons/factoid] 2c76fb: Minor tweaks & fixes

2019-12-10 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 2c76fb98e282971cbe6e2aeac282517fc6d058aa https://github.com/PathwayCommons/factoid/commit/2c76fb98e282971cbe6e2aeac282517fc6d058aa Author: Max Franz Date: 2019-12-10 (Tue, 10 Dec 2019

[cytoscape/cytoscape.js] d760c7: Update dev dependencies re. npm audit

2019-12-04 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: d760c763df3ca0cd24973b8b5aca2fd8cf92e6dc https://github.com/cytoscape/cytoscape.js/commit/d760c763df3ca0cd24973b8b5aca2fd8cf92e6dc Author: Max Franz Date: 2019-12-04 (Wed, 04 Dec 2019

[cytoscape/cytoscape.js] c8328e: Rename pysbjupyter to PyViPR in the who-uses list

2019-12-03 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: c8328ea0116e015e4674df691fdcaa36c33f6b2e https://github.com/cytoscape/cytoscape.js/commit/c8328ea0116e015e4674df691fdcaa36c33f6b2e Author: Max Franz Date: 2019-12-03 (Tue, 03 Dec 2019

[cytoscape/cytoscape.js] a1b918: Fix hierholzer example

2019-12-03 Thread Max Franz
paths: M documentation/md/collection/hierholzer.md Log Message: --- Fix hierholzer example Commit: 29224a8133b8da343f5e03bbb1fcaecdc8c9cda4 https://github.com/cytoscape/cytoscape.js/commit/29224a8133b8da343f5e03bbb1fcaecdc8c9cda4 Author: Max Franz Date: 2019-12-03

[cytoscape/cytoscape.js] d46210: chore(package): update rollup to version 1.27.8

2019-12-02 Thread Max Franz
n Commit: 06458f1c3927cd34bf32d2fc6b47ebda1625d70a https://github.com/cytoscape/cytoscape.js/commit/06458f1c3927cd34bf32d2fc6b47ebda1625d70a Author: Max Franz Date: 2019-12-02 (Mon, 02 Dec 2019) Changed paths: M package-lock.json M package.json Log Message: --- Merge pull reques

[cytoscape/cytoscape.js] 3643e8: chore(package): update rollup-plugin-license to ve...

2019-12-02 Thread Max Franz
file package-lock.json Commit: f9d99d382f9f9aedfa50e9110ca23b7154fc3256 https://github.com/cytoscape/cytoscape.js/commit/f9d99d382f9f9aedfa50e9110ca23b7154fc3256 Author: Max Franz Date: 2019-12-02 (Mon, 02 Dec 2019) Changed paths: M package-lock.json M package.j

[cytoscape/cytoscape.js] a4cadd: chore(package): update http-server to version 0.12.0

2019-12-02 Thread Max Franz
ge-lock.json Commit: 98e972800456037560f716ad11f1732aa1532195 https://github.com/cytoscape/cytoscape.js/commit/98e972800456037560f716ad11f1732aa1532195 Author: Max Franz Date: 2019-12-02 (Mon, 02 Dec 2019) Changed paths: M package-lock.json M package.json

[PathwayCommons/factoid] 4d6a5d: Update doc with `lastEditedDate` field: the last t...

2019-11-28 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 4d6a5d12447ba1240afb1f423d50658d47a56d14 https://github.com/PathwayCommons/factoid/commit/4d6a5d12447ba1240afb1f423d50658d47a56d14 Author: Max Franz Date: 2019-11-28 (Thu, 28 Nov 2019

[PathwayCommons/factoid] e06ec7: REST API: Include secret in document listing

2019-11-28 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: e06ec70ae92a5d82d233101fc8238b527b991e9c https://github.com/PathwayCommons/factoid/commit/e06ec70ae92a5d82d233101fc8238b527b991e9c Author: Max Franz Date: 2019-11-28 (Thu, 28 Nov 2019

[PathwayCommons/factoid] 774951: Remove postinstall script

2019-11-27 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 77495156e42788bece7834415f210fb0a2e763fb https://github.com/PathwayCommons/factoid/commit/77495156e42788bece7834415f210fb0a2e763fb Author: Max Franz Date: 2019-11-27 (Wed, 27 Nov 2019

[PathwayCommons/factoid] a09610: Add --headless for puppeteer

2019-11-27 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: a09610006423873e2c80d86195ff1c80d1b94d19 https://github.com/PathwayCommons/factoid/commit/a09610006423873e2c80d86195ff1c80d1b94d19 Author: Max Franz Date: 2019-11-27 (Wed, 27 Nov 2019

[PathwayCommons/factoid] a4e444: Add DOCUMENT_IMAGE_PADDING env var to help with tw...

2019-11-27 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: a4e4440f3da97fee44729338e4ebc5bc4e01bc8e https://github.com/PathwayCommons/factoid/commit/a4e4440f3da97fee44729338e4ebc5bc4e01bc8e Author: Max Franz Date: 2019-11-27 (Wed, 27 Nov 2019

[PathwayCommons/factoid] b78427: Add puppeteer flags that should help with docker c...

2019-11-27 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: b784270de42925909bd5b29a15c871cceec01845 https://github.com/PathwayCommons/factoid/commit/b784270de42925909bd5b29a15c871cceec01845 Author: Max Franz Date: 2019-11-27 (Wed, 27 Nov 2019

[PathwayCommons/factoid] f4daf6: Pubmed integration backend changes.

2019-11-26 Thread Max Franz
the delete route. Commit: 3f02366ef478786054a8a4ab4c24ccb54a570dcf https://github.com/PathwayCommons/factoid/commit/3f02366ef478786054a8a4ab4c24ccb54a570dcf Author: Max Franz Date: 2019-11-26 (Tue, 26 Nov 2019) Changed paths: M package-lock.json M package.json M src/client

[PathwayCommons/factoid] 425f77: Address lint warning

2019-11-21 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 425f77ccb44810033e614377cf0a18746d3b1bd6 https://github.com/PathwayCommons/factoid/commit/425f77ccb44810033e614377cf0a18746d3b1bd6 Author: Max Franz Date: 2019-11-21 (Thu, 21 Nov 2019

[PathwayCommons/factoid] 6711cf: Misc. editor fixes

2019-11-21 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 6711cfa8ac032cbf7f03d0ec19716823bf96dbfa https://github.com/PathwayCommons/factoid/commit/6711cfa8ac032cbf7f03d0ec19716823bf96dbfa Author: Max Franz Date: 2019-11-21 (Thu, 21 Nov 2019

[cytoscape/cytoscape.js] 7414aa: Updates

2019-11-19 Thread Max Franz
Branch: refs/heads/gh-pages Home: https://github.com/cytoscape/cytoscape.js Commit: 7414aa32bcf7c9eaadd4609b82368d7b69a2bbae https://github.com/cytoscape/cytoscape.js/commit/7414aa32bcf7c9eaadd4609b82368d7b69a2bbae Author: Max Franz Date: 2019-11-19 (Tue, 19 Nov 2019

[cytoscape/cytoscape.js] f3745d: Build 3.12.1

2019-11-19 Thread Max Franz
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: f3745dc9c1c4063091d936f4d788d73017d63dad https://github.com/cytoscape/cytoscape.js/commit/f3745dc9c1c4063091d936f4d788d73017d63dad Author: Max Franz Date: 2019-11-19 (Tue, 19 Nov 2019

[cytoscape/cytoscape.js]

2019-11-19 Thread Max Franz
Branch: refs/tags/v3.12.1 Home: https://github.com/cytoscape/cytoscape.js -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to

[cytoscape/cytoscape.js]

2019-11-19 Thread Max Franz
Branch: refs/tags/v3.11.1 Home: https://github.com/cytoscape/cytoscape.js -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to

[cytoscape/cytoscape.js] 389f1f: Build 3.11.1

2019-11-19 Thread Max Franz
Branch: refs/heads/3.11.x Home: https://github.com/cytoscape/cytoscape.js Commit: 389f1f1113ee7ebdfa558b4b372149079865dcf1 https://github.com/cytoscape/cytoscape.js/commit/389f1f1113ee7ebdfa558b4b372149079865dcf1 Author: Max Franz Date: 2019-11-19 (Tue, 19 Nov 2019

[cytoscape/cytoscape.js] ca5b8a: Add 3.12.1 & 3.11.1 to the release list in the docs

2019-11-19 Thread Max Franz
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: ca5b8a5c8898f8be6dd911ec29ce549f41e0e723 https://github.com/cytoscape/cytoscape.js/commit/ca5b8a5c8898f8be6dd911ec29ce549f41e0e723 Author: Max Franz Date: 2019-11-19 (Tue, 19 Nov 2019

[cytoscape/cytoscape.js] c24a8c: Add 3.12.1 & 3.11.1 to the release list in the docs

2019-11-19 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: c24a8cf89fe71c3619202ff0f592767eae2f3942 https://github.com/cytoscape/cytoscape.js/commit/c24a8cf89fe71c3619202ff0f592767eae2f3942 Author: Max Franz Date: 2019-11-19 (Tue, 19 Nov 2019

[PathwayCommons/factoid] d45300: Fixes & improvements to the home page

2019-11-18 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: d45300ab15cee0a9c589bda0a371a36656efe593 https://github.com/PathwayCommons/factoid/commit/d45300ab15cee0a9c589bda0a371a36656efe593 Author: Max Franz Date: 2019-11-18 (Mon, 18 Nov 2019

[PathwayCommons/factoid] 90de8e: Fixes non-production `twitter:image` meta tags

2019-11-14 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 90de8eb61b237e3242b464cfecef0d417f7036d8 https://github.com/PathwayCommons/factoid/commit/90de8eb61b237e3242b464cfecef0d417f7036d8 Author: Max Franz Date: 2019-11-14 (Thu, 14 Nov 2019

[PathwayCommons/factoid] 761cc5: Share to Twitter

2019-11-12 Thread Max Franz
Branch: refs/heads/share-to-twitter Home: https://github.com/PathwayCommons/factoid Commit: 761cc55c87503c00c7275049321c8eea6db119ab https://github.com/PathwayCommons/factoid/commit/761cc55c87503c00c7275049321c8eea6db119ab Author: Max Franz Date: 2019-11-12 (Tue, 12 Nov 2019

[PathwayCommons/factoid] b2df54: Service wrapper for pubmed fetch only. Support for...

2019-11-12 Thread Max Franz
/index.js Log Message: --- Remove named regex capture groups. Commit: 65ab97e042d5241166bb2803bc0b0d8b55b734ed https://github.com/PathwayCommons/factoid/commit/65ab97e042d5241166bb2803bc0b0d8b55b734ed Author: Max Franz Date: 2019-11-12 (Tue, 12 Nov 2019) Changed

[cytoscape/cytoscape.js] 3fcd3a: When calculating the bounds for an edge, the edge ...

2019-11-12 Thread Max Franz
Branch: refs/heads/3.11.x Home: https://github.com/cytoscape/cytoscape.js Commit: 3fcd3a7343e1f81069a9e137eac53abe23ccf201 https://github.com/cytoscape/cytoscape.js/commit/3fcd3a7343e1f81069a9e137eac53abe23ccf201 Author: Max Franz Date: 2019-11-12 (Tue, 12 Nov 2019

[cytoscape/cytoscape.js] 11615b: When calculating the bounds for an edge, the edge ...

2019-11-11 Thread Max Franz
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: 11615bdc9ac50359d517b496c3472ef781c3821b https://github.com/cytoscape/cytoscape.js/commit/11615bdc9ac50359d517b496c3472ef781c3821b Author: Max Franz Date: 2019-11-11 (Mon, 11 Nov 2019

[cytoscape/cytoscape.js] 7e2151: When calculating the bounds for an edge, the edge ...

2019-11-11 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 7e21516f56181b700416ed7f591d5db1f72a09b0 https://github.com/cytoscape/cytoscape.js/commit/7e21516f56181b700416ed7f591d5db1f72a09b0 Author: Max Franz Date: 2019-11-11 (Mon, 11 Nov 2019

[PathwayCommons/factoid] 140b3f: Support for the journal name abbreviation, if avai...

2019-11-11 Thread Max Franz
/commit/672349920790422ca665c27754679f61bf289490 Author: Max Franz Date: 2019-11-11 (Mon, 11 Nov 2019) Changed paths: M src/server/routes/api/document/pubmed/fetchPubmed.js M test/pubmed/fetchPubmed.js Log Message: --- Merge pull request #580 from PathwayCommons

[PathwayCommons/factoid] 3b187c: Document organisms returns list.

2019-11-06 Thread Max Franz
paths: M src/model/document/document.js Log Message: --- Document organisms returns list. Commit: 3b2c5e639d6160f2ae6647e514f972bf8482471c https://github.com/PathwayCommons/factoid/commit/3b2c5e639d6160f2ae6647e514f972bf8482471c Author: Max Franz Date: 2019-11

[cytoscape/cytoscape.js] 4e197c: Update package files to 3.13.0-unstable for the un...

2019-11-05 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 4e197c75dd59e792134113959d7d99c6061a8a44 https://github.com/cytoscape/cytoscape.js/commit/4e197c75dd59e792134113959d7d99c6061a8a44 Author: Max Franz Date: 2019-11-05 (Tue, 05 Nov 2019

[cytoscape/cytoscape.js] effc6c: Updates

2019-11-05 Thread Max Franz
Branch: refs/heads/gh-pages Home: https://github.com/cytoscape/cytoscape.js Commit: effc6c90d72bbc61c9fbcfc85bf6274b12cd6530 https://github.com/cytoscape/cytoscape.js/commit/effc6c90d72bbc61c9fbcfc85bf6274b12cd6530 Author: Max Franz Date: 2019-11-05 (Tue, 05 Nov 2019

[cytoscape/cytoscape.js] 4b361b: Build 3.11.0

2019-11-05 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 4b361b9187d8a91b5d317ebedf9e69ecc2b246f9 https://github.com/cytoscape/cytoscape.js/commit/4b361b9187d8a91b5d317ebedf9e69ecc2b246f9 Author: Max Franz Date: 2019-10-02 (Wed, 02 Oct 2019

[cytoscape/cytoscape.js] 62d6ef: Implemented hierholzers algorithm for directed graphs

2019-11-05 Thread Max Franz
https://github.com/cytoscape/cytoscape.js/commit/6a9442d589f829ef18c578b09054dacd71e026a9 Author: Max Franz Date: 2019-10-02 (Wed, 02 Oct 2019) Changed paths: M package-lock.json M package.json Log Message: --- Update package files to 3.12.0-unstable Commit

[cytoscape/cytoscape.js]

2019-11-05 Thread Max Franz
Branch: refs/tags/v3.12.0 Home: https://github.com/cytoscape/cytoscape.js -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to

[cytoscape/cytoscape.js] aa5421: Add 3.12.0 to the list of releases in the docs

2019-11-05 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: aa54213eb7219efb4f876f9fbfc033cbb6842365 https://github.com/cytoscape/cytoscape.js/commit/aa54213eb7219efb4f876f9fbfc033cbb6842365 Author: Max Franz Date: 2019-11-05 (Tue, 05 Nov 2019

[cytoscape/cytoscape.js] 1bdaaf: Disable publication of docs for 3.11.x

2019-11-05 Thread Max Franz
Branch: refs/heads/3.11.x Home: https://github.com/cytoscape/cytoscape.js Commit: 1bdaaf583f3b707f623360a7780cba932ee2c5b7 https://github.com/cytoscape/cytoscape.js/commit/1bdaaf583f3b707f623360a7780cba932ee2c5b7 Author: Max Franz Date: 2019-11-05 (Tue, 05 Nov 2019

[cytoscape/cytoscape.js] c6113a: Fix trailing comma in docmaker.json

2019-11-05 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: c6113a196a6d8238aacfa37136cec00dd40346f0 https://github.com/cytoscape/cytoscape.js/commit/c6113a196a6d8238aacfa37136cec00dd40346f0 Author: Max Franz Date: 2019-11-05 (Tue, 05 Nov 2019

[PathwayCommons/factoid] b4ef2c: Wrapper for fetchPubmed service. I added back the ...

2019-11-05 Thread Max Franz
/PathwayCommons/factoid/commit/658656c3745bed869e742642bed3c0d303c45355 Author: Max Franz Date: 2019-11-05 (Tue, 05 Nov 2019) Changed paths: M src/config.js M src/server/routes/api/document/pubmed/fetchPubmed.js Log Message: --- Merge pull request #576 from PathwayCommons

[PathwayCommons/factoid] 12ba03: Revise use of docEb & eleDb

2019-11-04 Thread Max Franz
Branch: refs/heads/demo-and-secrets Home: https://github.com/PathwayCommons/factoid Commit: 12ba038de409defce4afb8ffe12b9351a49489a7 https://github.com/PathwayCommons/factoid/commit/12ba038de409defce4afb8ffe12b9351a49489a7 Author: Max Franz Date: 2019-11-04 (Mon, 04 Nov 2019

[cytoscape/cytoscape.js] a8608f: Add an error message for headless calls to image e...

2019-11-04 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: a8608fcef117d2792759e63452182029512034ab https://github.com/cytoscape/cytoscape.js/commit/a8608fcef117d2792759e63452182029512034ab Author: Max Franz Date: 2019-11-04 (Mon, 04 Nov 2019

[cytoscape/cytoscape.js] 1381c8: Add Panaya to the who-uses list #914

2019-11-04 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 1381c8b9d19c11c70ba7def3e97ccc19fc4f8d42 https://github.com/cytoscape/cytoscape.js/commit/1381c8b9d19c11c70ba7def3e97ccc19fc4f8d42 Author: Max Franz Date: 2019-11-04 (Mon, 04 Nov 2019

[PathwayCommons/factoid] 891b57: Stubbed out the NCBI EUTILS search module and tests.

2019-11-04 Thread Max Franz
: 770e7c4293337824eb6081d16dc679130260e2f4 https://github.com/PathwayCommons/factoid/commit/770e7c4293337824eb6081d16dc679130260e2f4 Author: Max Franz Date: 2019-11-04 (Mon, 04 Nov 2019) Changed paths: M src/config.js M src/server/routes/api/document/pubmed/index.js A src

[PathwayCommons/factoid] f4bc90: Resolve merge duplication re. GET document/

2019-10-31 Thread Max Franz
Branch: refs/heads/demo-and-secrets Home: https://github.com/PathwayCommons/factoid Commit: f4bc902d8eed05f38eea6507e5f3b6489ca30e7d https://github.com/PathwayCommons/factoid/commit/f4bc902d8eed05f38eea6507e5f3b6489ca30e7d Author: Max Franz Date: 2019-10-31 (Thu, 31 Oct 2019

[cytoscape/cytoscape.js] 6221bf: Remove references to `hideLabelsOnViewport` #2487

2019-10-31 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 6221bfcd0324148da19c0fa974317afa657fb616 https://github.com/cytoscape/cytoscape.js/commit/6221bfcd0324148da19c0fa974317afa657fb616 Author: Max Franz Date: 2019-10-31 (Thu, 31 Oct 2019

[PathwayCommons/factoid] ceb67a: Added full tests for fetch PubMed; Stubbed out src

2019-10-30 Thread Max Franz
Author: Max Franz Date: 2019-10-30 (Wed, 30 Oct 2019) Changed paths: M package-lock.json M package.json A src/server/routes/api/document/pubmed/fetchPubmed.js A src/server/routes/api/document/pubmed/index.js A test/pubmed/fetchPubmed.js A test/pubmed/pmid_29440426.xml

[PathwayCommons/factoid] 1d8026: Lint re. merge

2019-10-29 Thread Max Franz
Branch: refs/heads/demo-and-secrets Home: https://github.com/PathwayCommons/factoid Commit: 1d80266c80d0d92b9ab7920e23bee043df35dc5a https://github.com/PathwayCommons/factoid/commit/1d80266c80d0d92b9ab7920e23bee043df35dc5a Author: Max Franz Date: 2019-10-29 (Tue, 29 Oct 2019

[PathwayCommons/factoid] 9ba272: WIP panel

2019-10-29 Thread Max Franz
Branch: refs/heads/demo-and-secrets Home: https://github.com/PathwayCommons/factoid Commit: 9ba272cddedc9015db863719a40131307ad54b98 https://github.com/PathwayCommons/factoid/commit/9ba272cddedc9015db863719a40131307ad54b98 Author: Max Franz Date: 2019-09-26 (Thu, 26 Sep 2019

[PathwayCommons/factoid] 3f040d: Add support for a demo route & enforce secret exis...

2019-10-29 Thread Max Franz
Branch: refs/heads/demo-and-secrets Home: https://github.com/PathwayCommons/factoid Commit: 3f040d3fdd23f9686e75f92e58e9239ea1262ea6 https://github.com/PathwayCommons/factoid/commit/3f040d3fdd23f9686e75f92e58e9239ea1262ea6 Author: Max Franz Date: 2019-10-29 (Tue, 29 Oct 2019

[cytoscape/cytoscape.js] a757ed: Improve md files re. contibutions & releases

2019-10-24 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: a757ed2760bb0aed63cb822188326c3b37ef6de5 https://github.com/cytoscape/cytoscape.js/commit/a757ed2760bb0aed63cb822188326c3b37ef6de5 Author: Max Franz Date: 2019-10-24 (Thu, 24 Oct 2019

[cytoscape/cytoscape.js] 62d6ef: Implemented hierholzers algorithm for directed graphs

2019-10-24 Thread Max Franz
-21 (Mon, 21 Oct 2019) Changed paths: M package.json Log Message: --- Add r-ba to contributors list Commit: d78a6b4f311ebb73abae0dd00a5a06a1bba98350 https://github.com/cytoscape/cytoscape.js/commit/d78a6b4f311ebb73abae0dd00a5a06a1bba98350 Author: Max Franz Date

[cytoscape/cytoscape.js] b8265e: chore(package): update mocha to version 6.2.2

2019-10-22 Thread Max Franz
n Commit: 0bb7ed960ed4657cf5cf831d519165727362732b https://github.com/cytoscape/cytoscape.js/commit/0bb7ed960ed4657cf5cf831d519165727362732b Author: Max Franz Date: 2019-10-22 (Tue, 22 Oct 2019) Changed paths: M package-lock.json M package.json Log Message: --- Merge pull reques

[cytoscape/cytoscape.js] 710794: Add UNIST Bioinformatics Group to the who-uses lis...

2019-10-22 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 7107942628cf35a4e396b1e9e7176da99b7c90b9 https://github.com/cytoscape/cytoscape.js/commit/7107942628cf35a4e396b1e9e7176da99b7c90b9 Author: Max Franz Date: 2019-10-22 (Tue, 22 Oct 2019

[PathwayCommons/factoid] a922f7: New homepage author ad design

2019-10-21 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: a922f72bdc44c8d4f2f9758bc4c1d00829fa8e63 https://github.com/PathwayCommons/factoid/commit/a922f72bdc44c8d4f2f9758bc4c1d00829fa8e63 Author: Max Franz Date: 2019-10-16 (Wed, 16 Oct 2019

[PathwayCommons/factoid] 17fbfe: Improve the grounding list button

2019-10-21 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 17fbfe42b0f274fa767bbc373f2e84d79732fa3d https://github.com/PathwayCommons/factoid/commit/17fbfe42b0f274fa767bbc373f2e84d79732fa3d Author: Max Franz Date: 2019-10-16 (Wed, 16 Oct 2019

[PathwayCommons/factoid] 17fbfe: Improve the grounding list button

2019-10-17 Thread Max Franz
Branch: refs/heads/autoground-tweaks Home: https://github.com/PathwayCommons/factoid Commit: 17fbfe42b0f274fa767bbc373f2e84d79732fa3d https://github.com/PathwayCommons/factoid/commit/17fbfe42b0f274fa767bbc373f2e84d79732fa3d Author: Max Franz Date: 2019-10-16 (Wed, 16 Oct 2019

[PathwayCommons/factoid]

2019-10-17 Thread Max Franz
Branch: refs/heads/homepage-author-ad Home: https://github.com/PathwayCommons/factoid -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to

[PathwayCommons/factoid] 0b7d10: Add TODO comment for @jvwong's admin panel integra...

2019-10-16 Thread Max Franz
Branch: refs/heads/homepage-author-ad Home: https://github.com/PathwayCommons/factoid Commit: 0b7d103c23dfba46564879281a7c3818dfe369b2 https://github.com/PathwayCommons/factoid/commit/0b7d103c23dfba46564879281a7c3818dfe369b2 Author: Max Franz Date: 2019-10-16 (Wed, 16 Oct

[PathwayCommons/factoid] a03beb: Linting cleanup

2019-10-16 Thread Max Franz
Branch: refs/heads/homepage-author-ad Home: https://github.com/PathwayCommons/factoid Commit: a03beb33eea5b31a73d4e2f2098f1f5024289378 https://github.com/PathwayCommons/factoid/commit/a03beb33eea5b31a73d4e2f2098f1f5024289378 Author: Max Franz Date: 2019-10-16 (Wed, 16 Oct

[PathwayCommons/factoid] a922f7: New homepage author ad design

2019-10-16 Thread Max Franz
Branch: refs/heads/homepage-author-ad Home: https://github.com/PathwayCommons/factoid Commit: a922f72bdc44c8d4f2f9758bc4c1d00829fa8e63 https://github.com/PathwayCommons/factoid/commit/a922f72bdc44c8d4f2f9758bc4c1d00829fa8e63 Author: Max Franz Date: 2019-10-16 (Wed, 16 Oct

[cytoscape/cytoscape.js] c8a136: Add Spin in het Web & SRI International to the who...

2019-10-07 Thread Max Franz
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: c8a136e6e90f3afc4fc97fdfb14d5bb6df1c21d5 https://github.com/cytoscape/cytoscape.js/commit/c8a136e6e90f3afc4fc97fdfb14d5bb6df1c21d5 Author: Max Franz Date: 2019-10-07 (Mon, 07 Oct 2019

[cytoscape/cytoscape.js] fcdaf5: Add Spin in het Web & SRI International to the who...

2019-10-07 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: fcdaf562ccc054faac25f7a6afba97002e229a54 https://github.com/cytoscape/cytoscape.js/commit/fcdaf562ccc054faac25f7a6afba97002e229a54 Author: Max Franz Date: 2019-10-07 (Mon, 07 Oct 2019

[cytoscape/cytoscape.js] 05181f: Update badge links to https

2019-10-07 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 05181f88dad1426c26269b17d0e43b2e702bc21c https://github.com/cytoscape/cytoscape.js/commit/05181f88dad1426c26269b17d0e43b2e702bc21c Author: Max Franz Date: 2019-10-07 (Mon, 07 Oct 2019

[cytoscape/cytoscape.js] daa243: Update README.md

2019-10-07 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: daa2436d80b9aadb4f97f1756c75e684949cd57b https://github.com/cytoscape/cytoscape.js/commit/daa2436d80b9aadb4f97f1756c75e684949cd57b Author: Max Franz Date: 2019-10-07 (Mon, 07 Oct 2019

[cytoscape/cytoscape.js] 6891d4: Update CONTRIBUTING.md link in readme

2019-10-07 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 6891d47c6966deada0116279a9477c89ade07a9e https://github.com/cytoscape/cytoscape.js/commit/6891d47c6966deada0116279a9477c89ade07a9e Author: Max Franz Date: 2019-10-07 (Mon, 07 Oct 2019

[PathwayCommons/factoid] 9ab8d1: Give up on testing on Travis

2019-10-02 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 9ab8d12da68d16ecb72c2062c8f5387fc5d029ed https://github.com/PathwayCommons/factoid/commit/9ab8d12da68d16ecb72c2062c8f5387fc5d029ed Author: Max Franz Date: 2019-10-02 (Wed, 02 Oct 2019

[cytoscape/cytoscape.js] 891be4: Updates

2019-10-02 Thread Max Franz
Branch: refs/heads/gh-pages Home: https://github.com/cytoscape/cytoscape.js Commit: 891be49651abb179faf9ed56597387f91eacad89 https://github.com/cytoscape/cytoscape.js/commit/891be49651abb179faf9ed56597387f91eacad89 Author: Max Franz Date: 2019-10-02 (Wed, 02 Oct 2019

[cytoscape/cytoscape.js] 4b361b: Build 3.11.0

2019-10-02 Thread Max Franz
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: 4b361b9187d8a91b5d317ebedf9e69ecc2b246f9 https://github.com/cytoscape/cytoscape.js/commit/4b361b9187d8a91b5d317ebedf9e69ecc2b246f9 Author: Max Franz Date: 2019-10-02 (Wed, 02 Oct 2019

[cytoscape/cytoscape.js]

2019-10-02 Thread Max Franz
Branch: refs/tags/v3.11.0 Home: https://github.com/cytoscape/cytoscape.js -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to

[cytoscape/cytoscape.js]

2019-10-02 Thread Max Franz
Branch: refs/tags/v3.10.2 Home: https://github.com/cytoscape/cytoscape.js -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to

[cytoscape/cytoscape.js] edfa40: Build 3.10.2

2019-10-02 Thread Max Franz
Branch: refs/heads/3.10.x Home: https://github.com/cytoscape/cytoscape.js Commit: edfa40533f93db01f8cf363d50fae93d37def45a https://github.com/cytoscape/cytoscape.js/commit/edfa40533f93db01f8cf363d50fae93d37def45a Author: Max Franz Date: 2019-10-02 (Wed, 02 Oct 2019

[cytoscape/cytoscape.js]

2019-10-02 Thread Max Franz
Branch: refs/tags/v3.9.4 Home: https://github.com/cytoscape/cytoscape.js -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to

[cytoscape/cytoscape.js] 5c84a2: Build 3.9.4

2019-10-02 Thread Max Franz
Branch: refs/heads/3.9.x Home: https://github.com/cytoscape/cytoscape.js Commit: 5c84a2ed7c2d0044d3063fc47a9255fdbadf4d3d https://github.com/cytoscape/cytoscape.js/commit/5c84a2ed7c2d0044d3063fc47a9255fdbadf4d3d Author: Max Franz Date: 2019-10-02 (Wed, 02 Oct 2019) Changed

[cytoscape/cytoscape.js] 6ba263: Add round-triangle shape

2019-10-02 Thread Max Franz
/626863ae6189944a0ef937a0022150cb01612298 Author: Max Franz Date: 2019-09-04 (Wed, 04 Sep 2019) Changed paths: M package-lock.json M package.json Log Message: --- Update package files to version 3.11.0-unstable Commit: fcc116caed70887ce1065fdd2d59f9f7272242e5

[cytoscape/cytoscape.js] b10a3e: Build 3.10.0

2019-10-02 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: b10a3e34ad4178042022afb7eaa88778a38cadc4 https://github.com/cytoscape/cytoscape.js/commit/b10a3e34ad4178042022afb7eaa88778a38cadc4 Author: Max Franz Date: 2019-09-04 (Wed, 04 Sep 2019

[cytoscape/cytoscape.js] 9b0e7f: Disable docs building for 3.10.x

2019-10-02 Thread Max Franz
Branch: refs/heads/3.10.x Home: https://github.com/cytoscape/cytoscape.js Commit: 9b0e7f9399b3a5b715d5c74e6f69189f2bbd5bd9 https://github.com/cytoscape/cytoscape.js/commit/9b0e7f9399b3a5b715d5c74e6f69189f2bbd5bd9 Author: Max Franz Date: 2019-10-02 (Wed, 02 Oct 2019

[cytoscape/cytoscape.js] 20fdf2: Add 3.11.0, 3.10.2, & 3.9.4 to the release list in...

2019-10-02 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 20fdf20cb83b822c16cd6fefaa7494efa2deba17 https://github.com/cytoscape/cytoscape.js/commit/20fdf20cb83b822c16cd6fefaa7494efa2deba17 Author: Max Franz Date: 2019-10-02 (Wed, 02 Oct 2019

[PathwayCommons/factoid] 78d2fd: Make travis wait longer so it might start rethinkd...

2019-10-02 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 78d2fdeff5ec0f5db0c190c887a8d40d1cbc214e https://github.com/PathwayCommons/factoid/commit/78d2fdeff5ec0f5db0c190c887a8d40d1cbc214e Author: Max Franz Date: 2019-10-02 (Wed, 02 Oct 2019

[PathwayCommons/factoid] 504a40: Update package.json

2019-10-02 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 504a400e79f870dd6aabd2397d957e5593086952 https://github.com/PathwayCommons/factoid/commit/504a400e79f870dd6aabd2397d957e5593086952 Author: Max Franz Date: 2019-10-02 (Wed, 02 Oct 2019

[PathwayCommons/factoid] 2efdb1: Add the initial design of the "welcome aboard" com...

2019-10-02 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 2efdb116e52995e1adfcfbd0388b6170ff665037 https://github.com/PathwayCommons/factoid/commit/2efdb116e52995e1adfcfbd0388b6170ff665037 Author: Max Franz Date: 2019-09-26 (Thu, 26 Sep 2019

[PathwayCommons/factoid] 17ba7a: Try to start rethinkdb manually for travis tests

2019-10-02 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 17ba7afe319d572d67f16b9d8dca7749361199fd https://github.com/PathwayCommons/factoid/commit/17ba7afe319d572d67f16b9d8dca7749361199fd Author: Max Franz Date: 2019-10-02 (Wed, 02 Oct 2019

[PathwayCommons/factoid] 98a80e: Replacing with rethinkdb dump and restore scripts;...

2019-10-02 Thread Max Franz
; Custom retrhinkdb dockerfile Commit: 45473b7f34f7d6df60ca3a83c74ccef6d6ba7d9d https://github.com/PathwayCommons/factoid/commit/45473b7f34f7d6df60ca3a83c74ccef6d6ba7d9d Author: Max Franz Date: 2019-10-02 (Wed, 02 Oct 2019) Changed paths: M README.md A docker/Dockerfile

[cytoscape/cytoscape.js] 8c412f: Add a note to the layouts intro re. headless bound...

2019-10-02 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 8c412ffb68af90c7a19d1045033e17f0879370b0 https://github.com/cytoscape/cytoscape.js/commit/8c412ffb68af90c7a19d1045033e17f0879370b0 Author: Max Franz Date: 2019-10-02 (Wed, 02 Oct 2019

[cytoscape/cytoscape.js] 7c7270: Add support for Stale bot

2019-10-01 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 7c7270c288833ba2f2fabec14b519ec9e0583d0f https://github.com/cytoscape/cytoscape.js/commit/7c7270c288833ba2f2fabec14b519ec9e0583d0f Author: Max Franz Date: 2019-10-01 (Tue, 01 Oct 2019

[cytoscape/cytoscape.js] d6279c: Cherry-pick @TpmKranz's changes re. esm-min build ...

2019-10-01 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: d6279cecc403dc5cc8c957b65177fec5aaa8fa54 https://github.com/cytoscape/cytoscape.js/commit/d6279cecc403dc5cc8c957b65177fec5aaa8fa54 Author: Max Franz Date: 2019-10-01 (Tue, 01 Oct 2019

[PathwayCommons/factoid] 0a8498: Update welcome aboard comic strip images

2019-10-01 Thread Max Franz
Branch: refs/heads/welcome-aboard-help Home: https://github.com/PathwayCommons/factoid Commit: 0a849832864d75a7cbbf58bcbd1eba1686d550ba https://github.com/PathwayCommons/factoid/commit/0a849832864d75a7cbbf58bcbd1eba1686d550ba Author: Max Franz Date: 2019-10-01 (Tue, 01 Oct

[cytoscape/cytoscape.js] cc1d7b: Make edge bounds generation stricter

2019-10-01 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: cc1d7bb913542bb5d600f5b9bec455c77add5de7 https://github.com/cytoscape/cytoscape.js/commit/cc1d7bb913542bb5d600f5b9bec455c77add5de7 Author: Max Franz Date: 2019-10-01 (Tue, 01 Oct 2019

[PathwayCommons/factoid] 755b07: Use no-tagline logo in help

2019-10-01 Thread Max Franz
Branch: refs/heads/welcome-aboard-help Home: https://github.com/PathwayCommons/factoid Commit: 755b074cf4922103ba23cee66609c428035cd08b https://github.com/PathwayCommons/factoid/commit/755b074cf4922103ba23cee66609c428035cd08b Author: Max Franz Date: 2019-10-01 (Tue, 01 Oct

[cytoscape/cytoscape.js] 624794: Add a red warning at the top of the description so...

2019-09-30 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 6247941af461f9f674e1eb02063b579c3b92beef https://github.com/cytoscape/cytoscape.js/commit/6247941af461f9f674e1eb02063b579c3b92beef Author: Max Franz Date: 2019-09-30 (Mon, 30 Sep 2019

[cytoscape/cytoscape.js] 51ac21: Backport 3.9.x : Error on mouseover/out while chan...

2019-09-26 Thread Max Franz
Branch: refs/heads/3.9.x Home: https://github.com/cytoscape/cytoscape.js Commit: 51ac2161960ab715570dbbc9424612588ee4a385 https://github.com/cytoscape/cytoscape.js/commit/51ac2161960ab715570dbbc9424612588ee4a385 Author: Max Franz Date: 2019-09-26 (Thu, 26 Sep 2019) Changed

[cytoscape/cytoscape.js] 77a066: Error on mouseover/out while changing bounds #2535

2019-09-26 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 77a066e6ab79732f30691c1136135bef451acea3 https://github.com/cytoscape/cytoscape.js/commit/77a066e6ab79732f30691c1136135bef451acea3 Author: Max Franz Date: 2019-09-26 (Thu, 26 Sep 2019

[cytoscape/cytoscape.js] 660dc5: Error on mouseover/out while changing bounds #2535

2019-09-26 Thread Max Franz
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: 660dc5c71470cb0eec2d97cd2f65e661e9a16800 https://github.com/cytoscape/cytoscape.js/commit/660dc5c71470cb0eec2d97cd2f65e661e9a16800 Author: Max Franz Date: 2019-09-26 (Thu, 26 Sep 2019

[PathwayCommons/factoid] 1e227d: Fix the admin title

2019-09-26 Thread Max Franz
Branch: refs/heads/management-panel Home: https://github.com/PathwayCommons/factoid Commit: 1e227db74937d08c0dfeb2da45454e92c4332853 https://github.com/PathwayCommons/factoid/commit/1e227db74937d08c0dfeb2da45454e92c4332853 Author: Max Franz Date: 2019-09-26 (Thu, 26 Sep 2019

[PathwayCommons/factoid] 9ba272: WIP panel

2019-09-26 Thread Max Franz
Branch: refs/heads/management-panel Home: https://github.com/PathwayCommons/factoid Commit: 9ba272cddedc9015db863719a40131307ad54b98 https://github.com/PathwayCommons/factoid/commit/9ba272cddedc9015db863719a40131307ad54b98 Author: Max Franz Date: 2019-09-26 (Thu, 26 Sep 2019

[cytoscape/cytoscape.js] 4ab5b3: Backport 3.9.x : `eles.components()` can erroneous...

2019-09-26 Thread Max Franz
Branch: refs/heads/3.9.x Home: https://github.com/cytoscape/cytoscape.js Commit: 4ab5b34478c330d67895e4085cf59d921afaefeb https://github.com/cytoscape/cytoscape.js/commit/4ab5b34478c330d67895e4085cf59d921afaefeb Author: Max Franz Date: 2019-09-26 (Thu, 26 Sep 2019) Changed

[cytoscape/cytoscape.js] 0e79a2: `eles.components()` can erroneously include loops ...

2019-09-26 Thread Max Franz
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: 0e79a2df15d02d1620f242f37b66ef18ff0ad50c https://github.com/cytoscape/cytoscape.js/commit/0e79a2df15d02d1620f242f37b66ef18ff0ad50c Author: Max Franz Date: 2019-09-26 (Thu, 26 Sep 2019

[cytoscape/cytoscape.js] a3819b: `eles.components()` can erroneously include loops ...

2019-09-26 Thread Max Franz
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: a3819b332587398f45879481204e1dad952af178 https://github.com/cytoscape/cytoscape.js/commit/a3819b332587398f45879481204e1dad952af178 Author: Max Franz Date: 2019-09-26 (Thu, 26 Sep 2019

<    5   6   7   8   9   10   11   12   13   14   >