Branch: refs/heads/unstable
  Home:   https://github.com/PathwayCommons/factoid
  Commit: 8e1f8f99b8e4e1ba9e9d8e9d3aa79da90bc84980
      
https://github.com/PathwayCommons/factoid/commit/8e1f8f99b8e4e1ba9e9d8e9d3aa79da90bc84980
  Author: Max Franz <maxkfr...@gmail.com>
  Date:   2020-07-19 (Sun, 19 Jul 2020)

  Changed paths:
    M src/config.js
    M src/model/element/element.js
    M src/server/routes/api/document/index.js
    M src/server/routes/api/document/indra.js

  Log Message:
  -----------
  Related paper tweaks 775 (#777)

* Remove unused /related-papers/:id route

* use master grounding service by default, for testing

* el.toString

* use simple slice & comment out unused stuff

* quick and dirty first pass at #775; old mapping code commented out for 
reference

* comment config

* apply double filtering of pmids for s.s. queries #775

1 - filter pmids from each template indra result
2 - filter pmid list just before sending to s.s. -- covers multitemplate case 
(i.e. doc level)

chronological via pmid proxy (pmid is int, increasing over time)

* basic shuffle padding approach for low interaction results

@jvwong @metincansiper, could you test this?

* maybe this will filter out the bogus result from s.s. (same pmid as the 
factoid)?

https://github.com/PathwayCommons/semantic-search/issues/16

@jvwong

* Clean up the console log and old commented out code segments.

* Handled some TODOs for making some constant variables configurable.

* Provide unique PMIDS for  INDRA results before filtering.

* Update the default grounding search url which was temporarily changed for the 
sake of testing.

Co-authored-by: metincansiper <metincansi...@gmail.com>
Co-authored-by: Jeffrey Wong <jvw...@gmail.com>


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