[deal.II] Re: How to use sacado package

2016-10-22 Thread Daniel Arndt
Jaekwang, It seems that no fortran compiler is found. You should be able to configure Trilinos without fortran using -DTrilinos_ENABLE_Fortran:BOOL=OFF After that it's the usual make install [1]. Best, Daniel [1] https://www.dealii.org/developer/external-libs/trilinos.html Am Samstag, 22. Okt

[deal.II] Re: How to apply boundary values for a particular point on the boundary instead of the whole boundary surface

2016-10-22 Thread Stephen DeWitt
Hi Hamed, I was in the same boat a few weeks ago. After reading through some of the other posts on this list (which Jean-Paul linked), I wrote the following method that you and maybe others will find useful. It takes in a vector containing the list of components of a field that need point const

[deal.II] Re: Development history of deal.II

2016-10-22 Thread Jean-Paul Pelteret
Very cool :-) Is the tool that you used to make this freely available? On Friday, October 21, 2016 at 1:29:15 AM UTC+2, Wolfgang Bangerth wrote: > > > > All, > a colleague of mine showed me a neat way to visualize the development > history of a code this week. I had to apply this to deal.II, of

[deal.II] Re: How to apply boundary values for a particular point on the boundary instead of the whole boundary surface

2016-10-22 Thread Stephen DeWitt
In case that link dies, here's the snippet of code: // Set constraints to pin the solution if there are no Dirichlet BCs for a component of a variable in an elliptic equation template void MatrixFreePDE::setRigidBodyModeConstraints( std::vector rigidBodyModeComponents, ConstraintMatrix * con

[deal.II] Re: How to apply boundary values for a particular point on the boundary instead of the whole boundary surface

2016-10-22 Thread Jean-Paul Pelteret
Thanks for sharing your solution, Stephen! On Saturday, October 22, 2016 at 1:43:29 PM UTC+2, Stephen DeWitt wrote: > > In case that link dies, here's the snippet of code: > > > // Set constraints to pin the solution if there are no Dirichlet BCs for a > component of a variable in an elliptic equ

Re: [deal.II] Re: Development history of deal.II

2016-10-22 Thread Matthias Maier
> Very cool :-) Is the tool that you used to make this freely available? The tool is gource if I am not absolutely mistaken. http://gource.io/ Best, Matthias -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/de

Re: [deal.II] Re: Defining tensor in different dim and spacedim

2016-10-22 Thread benhour . amirian66
Dear All, I want to solve my thermoelasticity problem in cylindrical coordinate systems. my domain includes two quarter of a circle in 2D and two quarter of two spheres in 3D. They are bulk. I attached my domain that was created by quarter_hyper_shell for 2D. But, I really do not kno how I can c

[deal.II] Re: How to use sacado package

2016-10-22 Thread Jaekwang Kim
Thanks Daniel! I tried to make install Trillions , but after the command "make install" I run into other error. */Users/jaekwangjk/Programs/trilinos-12.4.2-Source/packages/teuchos/core/src/Teuchos_GlobalMPISession.cpp:49:12: **fatal error: * * 'mpi.h' file not found* # include "mpi.h

Re: [deal.II] Re: Development history of deal.II

2016-10-22 Thread Jean-Paul Pelteret
Awesome, that looks to be it. Thanks! Cheers, J-P On Saturday, October 22, 2016 at 4:03:28 PM UTC+2, Matthias Maier wrote: > > > > Very cool :-) Is the tool that you used to make this freely available? > > The tool is gource if I am not absolutely mistaken. > > http://gource.io/ > > Best, >

[deal.II] Error during install

2016-10-22 Thread salil kulkarni
Hello, I am trying to install deal.ii (8.4.1) on my machine which is running linux mint 18 (ubuntu 16.04). During installation I get the error 'unknown CMake command "DEAL_II_ADD_LIBRARY" . I have verified the sha sum of the downloaded file. I am using cmake 3.5.1. I have seen a similar questio

Re: [deal.II] Error during install

2016-10-22 Thread Timo Heister
> Output: > $cmake -DCMAKE_INSTALL_PREFIX=/home/salil/Lib/DealII ../source > -DDEAL_II_WITH_MPI=OFF You need to point cmake at the root deal.II directory not at source/ -- Timo Heister http://www.math.clemson.edu/~heister/ -- The deal.II project is located at http://www.dealii.org/ For mailin

Re: [deal.II] Re: Development history of deal.II

2016-10-22 Thread Wolfgang Bangerth
On 10/22/2016 08:03 AM, Matthias Maier wrote: The tool is gource if I am not absolutely mistaken. http://gource.io/ Yes, it's gource. The exact command line is given at the bottom of the comments on the youtube video. Cheers W. --

Re: [deal.II] Re: How to use sacado package

2016-10-22 Thread Wolfgang Bangerth
Jaekwang, */Users/jaekwangjk/Programs/trilinos-12.4.2-Source/packages/teuchos/core/src/Teuchos_GlobalMPISession.cpp:49:12: **fatal error: * * 'mpi.h' file not found* If you configure Trilinos to use MPI (which you did when you called Trilinos' cmake script), then you obviously have to

Re: [deal.II] Re: How to use Trilinos instead of Petsc in step-40

2016-10-22 Thread Wolfgang Bangerth
On 10/21/2016 04:01 PM, Hamed Babaei wrote: Please look at the pdf file attached. Thanks I'm not overly familiar with the nomenclature of large-displacement elasticity. But the matrix you compute does at least not look *obviously* symmetric to me. If I see this right, you compute the integ

[deal.II] Alternative to local_range

2016-10-22 Thread Praveen C
Dear all local_range is marked deprecated http://www.dealii.org/developer/doxygen/deal.II/classLinearAlgebra_1_1distributed_1_1Vector.html#ade4b13c22b96f11d6652bf2271602180 How can I get the same info without using this function ? Thanks praveen -- The deal.II project is located at http://www

Re: [deal.II] Alternative to local_range

2016-10-22 Thread Wolfgang Bangerth
On 10/22/2016 09:41 PM, Praveen C wrote: local_range is marked deprecated http://www.dealii.org/developer/doxygen/deal.II/classLinearAlgebra_1_1distributed_1_1Vector.html#ade4b13c22b96f11d6652bf2271602180 How can I get the same info without using this function ? There should be a function t

Re: [deal.II] Alternative to local_range

2016-10-22 Thread Praveen C
I have an IndexSet of locally_owned_dofs and I want to know the starting index. praveen On Sun, Oct 23, 2016 at 9:56 AM, Wolfgang Bangerth wrote: > On 10/22/2016 09:41 PM, Praveen C wrote: > >> >> local_range is marked deprecated >> >> http://www.dealii.org/developer/doxygen/deal.II/classLinear

[deal.II] Trouble with VisIt 2.11

2016-10-22 Thread Praveen C
When I try to view a HDF5/xdmf file with VisIt 2.11, it reads the file, but when I try to plot a pseudocolor, I get this error engine_ser(3188,0x7fff7a57f000) malloc: *** error for object 0x7fba9b07bd10: pointer being freed was not allocated *** set a breakpoint in malloc_error_break to debug a