Re: [deal.II] extract_surface_mesh() does not extract refined cells

2023-12-05 Thread Simon Wiesheier
No worries :-) Setting the boundary ids on the coarse grid did the trick (no need to do it again on the refined grid). A short follow-up: After extracting the surface mesh (Triangulation<2,3>), I want to get rid of the Z-coordinate to obtain a Triangulation<2>. Unfortunately,

Re: [deal.II] extract_surface_mesh() does not extract refined cells

2023-12-05 Thread Luca Heltai
By the way: Sorry if my reply was not too precise at the beginning, and if it sound harsh, but I cannot not run your code on my iPhone (yet), even though I’m working on it. :) Till then, may I suggest that you provide as much information as you can, if you want people to answer quickly? Asking

Re: [deal.II] extract_surface_mesh() does not extract refined cells

2023-12-05 Thread Luca Heltai
The fact that the vtk file does not contain the refined cells does not necessarily mean that they are not extracted. If you look at the source code of the function, you will see that it generates the coarse surface mesh based on the coarse boundary ids to extract, and then it loops over all cells,

Re: [deal.II] extract_surface_mesh() does not extract refined cells

2023-12-05 Thread Simon Wiesheier
Dear Luca, the program I provided writes the volume mesh as well as the surface mesh to vtk files. If you compare these files, for instance in paraview, you will see that the locally refined cells are not extracted. Best, Simon Am Di., 5. Dez. 2023 um 21:14 Uhr schrieb Luca Heltai : > Dear

Re: [deal.II] extract_surface_mesh() does not extract refined cells

2023-12-05 Thread Luca Heltai
Dear Simon, What do you mean by “demonstrates”? The function you refer to is supposed to work with locally refined grids. What is the behavior you observe? What error do you get?You will have to map dofs on the surface to dofs on the bulk manually. The output of the function only returns a map of

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Re: [deal.II] Reporting issue with repo

2023-12-05 Thread Daniel Arndt
Alex, grid_reordering,h was removed in https://github.com/dealii/dealii/commit/fd0c356263d7115ebf58fcea15d0412a32da199e (which isn't part of any release yet). Best, Daniel On Tue, Dec 5, 2023 at 7:47 AM Alex Quinlan wrote: > Dear deal.ii devs, > > I cloned the deal.ii repo yesterday and found

[deal.II] extract_surface_mesh() does not extract refined cells

2023-12-05 Thread Simon
Dear all, attached is a minimal example which demonstrates that the function "extract_surface_mesh()" in the GridGenerator namespace does not extract refined cells. That is, it seems to work only for globally refined meshes. There is a comment in the implementation of this function: //

[deal.II] Reporting issue with repo

2023-12-05 Thread Alex Quinlan
Dear deal.ii devs, I cloned the deal.ii repo yesterday and found that the header file grid_reorder.h has been removed from include/deal.II/grid/. I searched the logs and the documentation and it appeared that the file *should* still be there, though I'm not 100% sure of that. I am not very

[deal.II] Re: Issue with intersection of two meshes with curved boundaries

2023-12-05 Thread Marco Feder
After debugging this particular instance, it turns out the issue is related to the CGAL kernels used by deal.II. In particular, with CGAL it's possible to rely on the so-called "exact computation paradigm" (a brief explanation is available here: https://www.cgal.org/exact.html). In the