Bug#1007248: [Pkg-javascript-devel] Bug#1007248:

2022-03-25 Thread Nilesh Patra
On 25 March 2022 4:51:44 pm IST, hardpenguin13 wrote: >Was also affected by this, ended up removing affected nodejs packages and >installing them again. No attempt to overwrite reported by dpkg. Same, I saw this yesterday and the same workaround worked.

Bug#1008200: node-send: patched node-mime-types cause problems for other reverse-dependencies

2022-03-24 Thread Nilesh Patra
On Thu, 24 Mar 2022 15:09:24 +0530 Nilesh Patra wrote: > Package: node-send > Version: 0.17.2-2 > Severity: important > X-Debbugs-Cc: mer...@debian.org > > Hi Yadd, > > node-send is patched[1] to use node-mime-types instead of node-mime. > However, this change is b

Bug#1008200: node-send: patched node-mime-types cause problems for other reverse-dependencies

2022-03-24 Thread Nilesh Patra
is not a function |at Object. (/home/nilesh/packages/shinyserv/shiny-server/lib/router/directory-router.js:27:11) |at Module._compile (internal/modules/cjs/loader.js:999:30) |at Object.Module._extensions..js (internal/modules/cjs/loader.js:1027:10) |at Module.load (internal/modules/cjs/loader.js

Bug#1008182: ITP: node-rewire -- Easy monkey-patching for node.js unit tests

2022-03-23 Thread nilesh
Package: wnpp Severity: wishlist Owner: Nilesh Patra X-Debbugs-CC: debian-de...@lists.debian.org * Package name: node-rewire Version : 6.0.0 Upstream Author : Johannes Ewald * URL : https://github.com/jhnns/rewire * License : Expat Programming Lang

Bug#994575: dipy: autopkgtest idea

2022-03-23 Thread Nilesh Patra
On Fri, 24 Dec 2021 19:15:51 +0530 Nilesh Patra wrote: > On checking, it stems from the fact that fury (python module) that dipy needs > is not in (test-)depends, and neither is it in the > archive. > Probably other tests also are missing some or the other module. I also see

Bug#1008112: Source is duplicated with golang-mvdan-sh

2022-03-22 Thread Nilesh Patra
his repo into the golang team, we can proceed with the merge. Regards, Nilesh signature.asc Description: PGP signature

Bug#1008112: Source is duplicated with golang-mvdan-sh

2022-03-22 Thread Nilesh Patra
Talau, could you mind bring shfmt to Go package team umbrella? (CC'ed Marcos explicitly again) @Marcos, kindly do this Regards, Nilesh signature.asc Description: PGP signature

Bug#1008103: ITP: golang-github-gatherstars-com-jwz -- Go implementation of the JWZ email threading algorithm

2022-03-22 Thread Nilesh Patra
Package: wnpp Severity: wishlist Owner: Nilesh Patra * Package name: golang-github-gatherstars-com-jwz Version : 1.3.0-1 Upstream Author : GatherStars * URL : https://github.com/gatherstars-com/jwz * License : Apache-2.0 Programming Lang: Go Description

Bug#1008101: ITP: golang-github-jhillyerd-enmime -- MIME mail encoding and decoding package for Go

2022-03-22 Thread Nilesh Patra
Package: wnpp Severity: wishlist Owner: Nilesh Patra * Package name: golang-github-jhillyerd-enmime Version : 0.9.3-1 Upstream Author : James Hillyerd * URL : https://github.com/jhillyerd/enmime * License : Expat Programming Lang: Go Description : MIME

Bug#1008099: ITP: golang-github-cention-sany-utf7 -- UTF7 UTF8 transcoder. With transformer interface.

2022-03-22 Thread Nilesh Patra
Package: wnpp Severity: wishlist Owner: Nilesh Patra * Package name: golang-github-cention-sany-utf7 Version : 0.0~git20170124.26cad61-1 Upstream Author : Sany * URL : https://github.com/cention-sany/utf7 * License : TODO Programming Lang: Go Description

Bug#1005479: toil: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.10 3.9" returned exit code 13

2022-03-19 Thread Nilesh Patra
y mentioned for the case where new > architectures are added. That is what I always do, I add a negation as "!", which is also what I did in this case: https://salsa.debian.org/med-team/toil/-/blob/master/debian/tests/control#L8 Regards, Nilesh signature.asc Description: PGP signature

Bug#1005479: toil: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.10 3.9" returned exit code 13

2022-03-19 Thread Nilesh Patra
On 19 March 2022 1:56:17 pm IST, Sascha Steinbiss wrote: >Hi Nilesh, > >[…] >> Would it be possible to add a hint to ignore arm64 autopkgtest suite? > >BTW I think this is possible already in the autopkgtest definition [1] by >adding an Architecture: section and leavi

Bug#1007713: ITP: python-railroad-diagrams -- library for generating railroad diagrams - Python port

2022-03-15 Thread Nilesh Patra
Package: wnpp Severity: wishlist Subject: ITP: python-railroad-diagrams -- library for generating railroad diagrams - Python port Package: wnpp Owner: Nilesh Patra Severity: wishlist * Package name: python-railroad-diagrams Version : 1.1.1 Upstream Author : Tab Atkins Jr * URL

Bug#1000336: Upgrading tbb

2022-03-15 Thread Nilesh Patra
once about it https://salsa.debian.org/salsa/support/-/issues/291 Hope that helps. Regards, Nilesh OpenPGP_signature Description: OpenPGP digital signature

Bug#1000336: Upgrading tbb

2022-03-13 Thread Nilesh Patra
if any. Did you get a chance to do this yet? As we _really_ need numba at this point. Regards, Nilesh OpenPGP_signature Description: OpenPGP digital signature

Bug#1007164: RM: shovill [arm64 ppc64el armhf armel i386 mips64el mipsel ppc64el s390x] -- ROM; Unusable everywhere except amd64

2022-03-12 Thread Nilesh Patra
Package: ftp.debian.org Severity: normal shovill Depends on megahit which is amd64-only and hence shovill is usable only on amd64. Please remove the cruft shovill binaries on !amd64 archs. Regards, Nilesh

Bug#1004516: cwltool breaks toil autopkgtest: No such file or directory: '/home/debci/tmp/tmpgxz5j85g'

2022-03-10 Thread Nilesh Patra
ool. This has been fixed with my new upload; hence closing. Regards, Nilesh signature.asc Description: PGP signature

Bug#1005479: toil: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.10 3.9" returned exit code 13

2022-03-10 Thread Nilesh Patra
Hi again, Paul. On 3/10/22 6:28 PM, Nilesh Patra wrote: On Thu, Mar 10, 2022 at 01:09:41PM +0100, Paul Gevers wrote: I was finally able to make time and do this. I first ran admin@ci-worker08:/tmp/toil$ apt source toil/unstable admin@ci-worker08:/tmp/toil/toil-5.6.0$ autopkgtest --shell

Bug#1004455: python3-mappy: undefined symbol ksw_extz2_sse on several architectures

2022-03-10 Thread Nilesh Patra
; I know you are occupied and I apologize to bother you. But could you please help fix this (simde related problem with minimap2? Unfortunately this has caused a many testing removals and we would want to have them back again. Regards, Nilesh signature.asc Description: PGP signature

Bug#1006376: blasr: autopkgtest regression: Segmentation fault

2022-03-10 Thread Nilesh Patra
en now. https://ci.debian.net/data/autopkgtest/testing/amd64/b/blasr/19873084/log.gz Regards, Nilesh signature.asc Description: PGP signature

Bug#1005479: toil: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.10 3.9" returned exit code 13

2022-03-10 Thread Nilesh Patra
topkgtest-unstable-i386 > > to confirm it triggers the issue. Than I put the try/except around the block > you proposed (patch didn't apply). The test then ran OK. Thanks a lot, Paul! I uploaded with the patch. Regards, Nilesh signature.asc Description: PGP signature

Bug#1006664: Revert?

2022-03-02 Thread Nilesh Patra
> python3-unicodedata2 has disappeared from the NEW queue, has it been > rejected? https://tracker.debian.org/pkg/python-unicodedata2 > Can we go back to 4.28.5-1 ? Not needed now, thanks to Sean for processing it in time Regards, Nilesh signature.asc Description: PGP signature

Bug#1005479: toil: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.10 3.9" returned exit code 13

2022-03-02 Thread Nilesh Patra
Hi Paul, On 3/2/22 11:51 PM, Paul Gevers wrote: I tried re-triggering it to check once again but looks like runners are not up unfortunately. You mean the salsa ones, right? Yes And so if you could trigger a test suite for this package at your end once, and help debug it, that'd be

Bug#1005479: toil: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.10 3.9" returned exit code 13

2022-03-02 Thread Nilesh Patra
Hi Paul, On 3/2/22 9:09 PM, Paul Gevers wrote: On 02-03-2022 14:58, Nilesh Patra wrote: @Paul, could you please help reproduce this in the debci environment and help us with any clues as to what might be wrong? The autopkgtest command line is at the top of each log. I am aware, and I use

Bug#1005479: toil: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.10 3.9" returned exit code 13

2022-03-02 Thread Nilesh Patra
.html [2]: https://ci.debian.net/data/autopkgtest/testing/amd64/t/toil/19660240/log.gz [3]: https://qa.debian.org/excuses.php?package=toil Regards, Nilesh signature.asc Description: PGP signature

Bug#1000980: kubernetes: Please upgrade to golang-1.17

2022-02-28 Thread Nilesh Patra
On Tue, 8 Feb 2022 18:02:54 + Janos LENART wrote: > I'll get on this. Thanks. Janos, Any updates on this? There is a patch as well in this email[1] Can you please apply and upload? [1]: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1000980#31 Regards, Nilesh signature.

Bug#1005870: [Resolved] Unable to activate singularity container from within boot service script

2022-02-28 Thread Nilesh Patra
control: fixed -1 3.9.5+ds1-3 control: close -1 As confirmed by the bug reporter, this bug is fixed, hence closing Regards, Nilesh signature.asc Description: PGP signature

Bug#1006536: python-prov fails its autopkgtest with rdflib 6.1.1-1

2022-02-27 Thread Nilesh Patra
, Nilesh -- System Information: Debian Release: bookworm/sid APT prefers testing APT policy: (500, 'testing') Architecture: amd64 (x86_64) Kernel: Linux 5.14.0-2-amd64 (SMP w/8 CPU threads) Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), LANGUAGE not set Shell: /bin/sh linked

Bug#1005870: Unable to activate singularity container from within boot service script

2022-02-26 Thread Nilesh Patra
On Wed, Feb 23, 2022 at 11:50:30PM +, Fox, Ron wrote: > Thank you we'll give it a try as soon as it migrates out to our internal > mirrors. Ron, Any update on this - if it is there on your internal servers by now? Regards, Nilesh signature.asc Description: PGP signature

Bug#1005459: rdflib: FTBFS: dh_auto_test: error: pybuild --test --test-nose -i python{version} -p "3.10 3.9" returned exit code 13

2022-02-24 Thread Nilesh Patra
? What do you think? Pseudo excuses do not look too bad[2] and package in testing this is broken anyway, you can upload IMO [1]: https://salsa.debian.org/ruby-team/meta [2]: https://release.debian.org/britney/pseudo-excuses-experimental.html#rdflib Regards, Nilesh OpenPGP_signature Description

Bug#1005459: rdflib: FTBFS: dh_auto_test: error: pybuild --test --test-nose -i python{version} -p "3.10 3.9" returned exit code 13

2022-02-24 Thread Nilesh Patra
On 2/24/22 6:00 PM, Nilesh Patra wrote: One really odd thing I noticed is that there is no dh_auto_build is overridden but not triggered inside it again, and so dh_auto_build happening at all. ^ Wow, in a hurry I wrote really sloppy english there I meant

Bug#1005459: rdflib: FTBFS: dh_auto_test: error: pybuild --test --test-nose -i python{version} -p "3.10 3.9" returned exit code 13

2022-02-24 Thread Nilesh Patra
; after which the package is building. I am simply running these tests also as autopkgtest with "needs-internet" restriction which should be a good enough scrutiny. All changes in salsa. But please kindly check this properly before you do a dput. Hope that helps. Regar

Bug#1005870: Unable to activate singularity container from within boot service script

2022-02-23 Thread Nilesh Patra
in > the attached file portmanager > > Here is the tail of that file in case the bug reporting system does not > support attachments: > [...] There has been a new release that was uploaded to unstable a few hours ago. Can you please check with this one if the problem still persi

Bug#990201: CVE-2021-33622 (was: Re: Accepted singularity-container 3.9.5+ds1-1 (source) into experimental)

2022-02-21 Thread Nilesh Patra
Hi again, On Mon, 21 Feb 2022 01:03:13 +0530 Nilesh Patra wrote: > > So where has this issue bin fixed? > > But yes, you are right, even at Mitre metadata, I do not find any information > about any patch for the bug; i.e. I do not see the "code" that fixes it, and >

Bug#1003773: aerc: please update Homepage (and probably debian/copyright URIs as well)

2022-02-21 Thread Nilesh Patra
link i.e. https://git.sr.ht/~rjarry/aerc Maybe this was updated there after you filed this bug report. But in any case, this bug report is no longer valid. If you agree, please close this. Regards, Nilesh signature.asc Description: PGP signature

Bug#990201: CVE-2021-33622 (was: Re: Accepted singularity-container 3.9.5+ds1-1 (source) into experimental)

2022-02-20 Thread Nilesh Patra
u are right, even at Mitre metadata, I do not find any information about any patch for the bug; i.e. I do not see the "code" that fixes it, and hence I too am skeptical whether or not it is really gone. For the sake of completeness, I have opened a issue upstream[1] [1]: https://github.com

Bug#1005952: [Pkg-javascript-devel] RFP: libjs-vega -- programmed web graphics with JSON

2022-02-19 Thread Nilesh Patra
n you please test it with the qiime package? And see that it's rendering okay? Regards, Nilesh

Bug#1005952: [Pkg-javascript-devel] RFP: libjs-vega -- programmed web graphics with JSON

2022-02-19 Thread Nilesh Patra
ies to have better >browser files Thanks again. Do you think it'd be possible to upgrade d3-array in foreseeable future? I have not checked how intrusive this package upgrading could be for reverse dependencies, I wonder if you'd have some idea there? Regards, Nilesh

Bug#1005952: RFP: libjs-vega -- programmed web graphics with JSON

2022-02-19 Thread Nilesh Patra
Hi Yadd, Gentle ping about this? :-)) It is perfectly OK if you are busy and would not manage On 2/18/22 8:24 PM, Nilesh Patra wrote: control: tags -1 help Hi all, We need this one in for an important med-team package (qiime). Unfortunately, I personally do not have enough bandwidth

Bug#990201: Update golang-github-appc-cni to 1.0 (was Re: singularity-container: CVE-2021-33622)

2022-02-18 Thread Nilesh Patra
On 2/19/22 2:08 AM, Andreas Tille wrote: Am Fri, Feb 18, 2022 at 11:31:23PM +0530 schrieb Nilesh Patra: | dh_fixperms | chown -c root.root debian/singularity-container/usr/lib/*/singularity/bin/* | chown: changing ownership of 'debian/singularity-container/usr/lib/x86_64-linux-gnu/singularity

Bug#990201: singularity-container: CVE-2021-33622

2022-02-18 Thread Nilesh Patra
personally have no idea about Go language nor singularity and really need the help of previous Uploaders / Go team. You missed to apply the upstream commit properly; I have pushed to fix that properly. Now the build chokes with | -o cmd/starter/c/starter /home/nilesh/packages/singularity

Bug#1005952: RFP: libjs-vega -- programmed web graphics with JSON

2022-02-18 Thread Nilesh Patra
provides that you added in recently :) Regards, Nilesh Package: wnpp Severity: wishlist * Package name: libjs-vega Version : 5.21.0 * URL : https://github.com/vega/vega * License : BSD Programming Lang: JavaScript Description : programmed web graphics

Bug#1005011: Please fix capnproto in unstable as well (Was: Re: Bug#1005011: fixed in capnproto 0.9.1-2)

2022-02-16 Thread Nilesh Patra
Tony/Tom, Can you do corresponding fixes for unstable too, or otherwise move experimental release to unstable? Otherwise this bug is causing a un-warranted-for autorm, for example in parsnp[1] [1]: https://tracker.debian.org/pkg/parsnp Regards, Nilesh On Sat, 12 Feb 2022 16:03:40 +

Bug#1005695: ITP: r-cran-spatstat.random -- Random Generation Functionality for the 'spatstat' Family

2022-02-13 Thread Nilesh Patra
Package: wnpp Severity: wishlist Subject: ITP: r-cran-spatstat.random -- Random Generation Functionality for the 'spatstat' Family Package: wnpp Owner: Nilesh Patra Severity: wishlist * Package name: r-cran-spatstat.random Version : 2.1 Upstream Author : Adrian Baddeley, * URL

Bug#991490: r-cran-r2html_2.3.2+dfsg-1_amd64.changes REJECTED

2022-02-12 Thread Nilesh Patra
egards, Nilesh signature.asc Description: PGP signature

Bug#1003567: Please make a separate package for mistune 2.x

2022-02-05 Thread Nilesh Patra
On 2/6/22 12:20 AM, Julian Gilbey wrote: On Fri, Feb 04, 2022 at 09:27:59PM +0530, Nilesh Patra wrote: On 2/4/22 9:18 PM, Julian Gilbey wrote: [...] _mistune.py within the Debian package, and have nbconvert do "import nbconvert.filters._mistune as mistune" (see /usr/lib/python3/dis

Bug#1003567: Please make a separate package for mistune 2.x

2022-02-04 Thread Nilesh Patra
t? In such a case, we atleast will have a few examples to see how to go about doing the API changes the right way. We could patch out at our end and send the changes upstream for review provided we are stuck in an unfortunate situation. Let me know what you'd think about this? Regards, N

Bug#1003567: Please make a separate package for mistune 2.x

2022-02-04 Thread Nilesh Patra
ittle more for the dust to settle, IMHO. Regards, Nilesh OpenPGP_signature Description: OpenPGP digital signature

Bug#859279: Updating the ygl Uploaders list

2022-01-31 Thread Nilesh Patra
gmatic pov, I found it right to do. Unless Kumar has plans of stepping in, do you think we should close this bug report too? Let me know. Regards, Nilesh

Bug#994867: r-cran-jquerylib_0.1.4+dfsg-1_amd64.changes REJECTED

2022-01-30 Thread Nilesh Patra
A quick review/accept is highly appreciated. Regards, Nilesh signature.asc Description: PGP signature

Bug#952169: libmodule-starter-plugin-cgiapp-perl: FTBFS: dh_auto_test: error: perl Build test --verbose 1 returned exit code 1

2022-01-30 Thread Nilesh Patra
last release, I NMU'd what I found working. The fix seems to be already there on your corresponding github repository here[1] I have attached the debdiff of my NMU, could you please consider merging? [1]: https://github.com/jaldhar/Module-Starter-Plugin-CGIApp/commit/73ec81f8e648fbda430f3f81ba5

Bug#1003017: dulwich: autopkgtest regression: src/debian/tests/testsuite3: 10: -m: not found

2022-01-29 Thread Nilesh Patra
t NMU'd the fix. debdiff is attached with this email, please consider applying Regards, Nilesh diff -Nru dulwich-0.20.31/debian/changelog dulwich-0.20.31/debian/changelog --- dulwich-0.20.31/debian/changelog2022-01-23 18:05:56.0 + +++ dulwich-0.20.31/debian/changelog2022-01-29 23:36:01

Bug#995171: [Help] Re: Bug#995171: need newer release

2022-01-27 Thread Nilesh Patra
nt how to fix this. Me neither, but hopefully that helped a bit? PS: I'm not subscribed to debian-go list. Please keep the bug report in CC. Hope I did enough to reach out to you :-)) Regards, Nilesh [1] https://salsa.debian.org/hpc-team/singularity-container [2] https://salsa.debian

Bug#864795: RFP: brave-browser -- web browser with privacy and micropayment features

2022-01-26 Thread Nilesh Patra
, Nilesh

Bug#864795: RFP: brave-browser -- web browser with privacy and micropayment features

2022-01-26 Thread Nilesh Patra
On 1/26/22 1:29 PM, Nilesh Patra wrote: Long time since this ITP is open, just wanted to know if there's something blocking this, and/or if you're working on this anymore? Oops, looks like this was always an RFP, apologies for the noise :) Regards, Nilesh

Bug#1003979: arachne-pnr build-depends on removed package

2022-01-25 Thread Nilesh Patra
and 1138 not upgraded. Inst fpga-icestorm-chipdb (0~20220102git3b7b199-3 Debian:testing [all]) Conf fpga-icestorm-chipdb (0~20220102git3b7b199-3 Debian:testing [all]) Could you please clarify this bug report a little? Regards, Nilesh signature.asc Description: PGP signature

Bug#1000435: Matplotlib crashes on mips64el in lines.py

2022-01-25 Thread Nilesh Patra
Sandro, Looks like Yunqiang has a patch that fixed the problem. Can you add this patch and upload? Would you allow them to NMU? (See the mail below) Thanks, -Nilesh On Tue, 25 Jan 2022 16:58:34 +0800 Yunqiang Su wrote: > On Sat, 22 Jan 2022 18:23:13 +0800 YunQiang Su wrote: > > O

Bug#1003561: mypy breaks python-sop autopkgtest: Missing type parameters for generic type "_SubParsersAction"

2022-01-17 Thread Nilesh Patra
Hi Daniel, I just NMU'd a a fix for this, since this was blocking mypy transition. Debdiff is attached with this email, could you please apply this upstream and/or in the deb package? Regards, Nilesh diff -Nru python-sop-0.2.0/debian/changelog python-sop-0.2.0/debian/changelog --- python-sop

Bug#1003090: RFS: ffcvt/1.7.5-1

2022-01-16 Thread Nilesh Patra
somewhere? > Yes please @Alois. CC'ed Faust as well. @Faustin, would you have some idea? Hope that helps. Let me know if you need sponsoring. Please do when all dust settles. I want to do this now, but I'll wait for a couple of days for replies/opinions. Yes, indeed Nilesh, as I'm not allo

Bug#1003090: RFS: ffcvt/1.7.5-1

2022-01-15 Thread Nilesh Patra
'll remove the build dependency of easygen as planned, as I know for sure it can fix the issue I am not sure if that's the problem here. Why would it fix the issue? Somebody help please. Hope that helps. Let me know if you need sponsoring. Regards, Nilesh | cd obj-x86_64-linux-gnu/src/

Bug#1003623: ITP: angelfish -- Web browser for Plasma Mobile

2022-01-12 Thread Nilesh Patra
Package: wnpp Severity: wishlist Subject: ITP: angelfish -- Web browser for Plasma Mobile Package: wnpp Owner: Nilesh Patra Severity: wishlist * Package name: angelfish Version : 21.06 Upstream Author : Rinigus * URL : https://apps.kde.org/angelfish/ * License

Bug#1002223: simde: FTBFS: dh_auto_test: error: cd clang_test && LC_ALL=C.UTF-8 MESON_TESTTHREADS=4 meson test returned exit code 6

2022-01-10 Thread Nilesh Patra
Control: severity -1 important On Mon, 10 Jan 2022 15:53:01 +0530 Nilesh Patra wrote: > Andreas, > > On Thu, 30 Dec 2021 09:07:08 +0100 Andreas Tille wrote: > > Control: tags -1 upstream > > Control: forwarded -1 https://github.com/simd-everywhere/simde/issues/936 >

Bug#1002223: simde: FTBFS: dh_auto_test: error: cd clang_test && LC_ALL=C.UTF-8 MESON_TESTTHREADS=4 meson test returned exit code 6

2022-01-10 Thread Nilesh Patra
C to build with SIMDe in Debian So I think you could simply do so and reduce the severity of the bug after a re-title since it is not exactly a 'fix' but a workaround What do you think? Regards, Nilesh signature.asc Description: PGP signature

Bug#1002757: hfd-service: FTBFS: dh_auto_configure: error: cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTA

2022-01-09 Thread Nilesh Patra
not in archive yet) is choking with similar errors. Since you maintain both hfd-service (which has the above bug report) and qtfeedback5-dev, I wonder if you have some ideas? Do let us know. Regards, Nilesh signature.asc Description: PGP signature

Bug#998244: lists.debian.org: request for debian-math mailing list

2022-01-02 Thread Nilesh Patra
Hi Listmasters, Gentle ping on this? Since it has been a while now, and there are interested people, enabling a list will help us. Could you please consider processing the request whenever you have time? Regards, Nilesh On Tue, 14 Dec 2021 15:43:50 + Tobias Hansen wrote: > Hi C

Bug#1002142: shasta: FTBFS: PythonModule.cpp:40:29: error: expected primary-expression before ‘(’ token

2021-12-31 Thread Nilesh Patra
forwarded -1 https://github.com/chanzuckerberg/shasta/issues/274 Hopefully upstream fixes it soonish Regards, Nilesh signature.asc Description: PGP signature

Bug#1002587: python3-sage: Depends on unavailable package

2021-12-27 Thread Nilesh Patra
Regards, Nilesh OpenPGP_signature Description: OpenPGP digital signature

Bug#1002525: r-cran-tmb: autopkgtest needs update for new version of rmatrix: Package version inconsistency detected.

2021-12-25 Thread Nilesh Patra
rt of a templated reply that you see above which is reasonable since there are so many similar bugs, if you see other bugs that break autopkgtests, you will find the wording to be awfully similar. For example: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=996279 Hence, we need to re-assign an

Bug#994575: dipy: autopkgtest idea

2021-12-24 Thread Nilesh Patra
ve. Probably other tests also are missing some or the other module. I also see a couple of circular imports that we need to fix. This is my understanding ^^ so maybe packaging fury will help. Regards, Nilesh signature.asc Description: PGP signature

Bug#1000336: numba: FTBFS with Python 3.10

2021-12-22 Thread Nilesh Patra
? Actually because of the current state of numba, several reverse depends are FTBFS so it's bit urgent to push. Apologies for getting on your nerves, though. Regards, Nilesh signature.asc Description: PGP signature

Bug#1001992: autopkgtest: Support for non-install test

2021-12-19 Thread Nilesh Patra
this? Or is it somehow possible to run autopkgtest w/o installing the package, and "assuming" that the .deb is already there? Regards, Nilesh -- System Information: Debian Release: bookworm/sid APT prefers testing APT policy: (500, 'testing') Architecture: amd64 (x86_64) Kernel: Linux 5.14.0-2-am

Bug#1001936: r-cran-rbibutils: Failing autopkgtests on !x86

2021-12-19 Thread Nilesh Patra
Package: r-cran-rbibutils Version: 2.2.4-1 Severity: serious Control: forwarded -1 https://github.com/GeoBosh/rbibutils/issues/8 Dear Maintainer, rbibutils fails its autopkgtests as given below. I have fwded this to upstream. ══ Failed tests

Bug#1001663: r-cran-satellite: autopkgtest failure on ppc64el

2021-12-19 Thread Nilesh Patra
Report. [1]: https://ci.debian.net/data/autopkgtest/testing/ppc64el/r/r-cran-satellite/17626107/log.gz [2]: https://ci.debian.net/packages/r/r-cran-satellite/testing/ppc64el/ BR, Nilesh signature.asc Description: PGP signature

Bug#1001657: Ball fails its autopkgtest - how to properly deal with sip files?

2021-12-16 Thread Nilesh Patra
e from our us installing it in own machines only for testing purposes. Upstream is dead as well, so this gives me several green flags to proceed with a removal. Regards, Nilesh OpenPGP_signature Description: OpenPGP digital signature

Bug#985071: fixed in smalt 0.7.6-10

2021-12-15 Thread Nilesh Patra
alt missing files: test/sequenceReverseComplement_test | dh_install: error: missing files, aborting | make: *** [debian/rules:8: binary] Error 25 | dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 Regards, Nilesh signature.asc Description: PGP signature

Bug#1001657: Ball fails its autopkgtest - how to properly deal with sip files?

2021-12-15 Thread Nilesh Patra
On 15 December 2021 2:36:14 pm IST, Andreas Tille wrote: >Hi Étienne, > >Am Tue, Dec 14, 2021 at 11:13:21PM +0100 schrieb Étienne Mollier: >> Étienne Mollier, on 2021-12-14: >> > However, once the sip file is caught, the package fails to build >> > from source due to various errors in the

Bug#1001549: node-mermaid: FTBFS with webpack5: Error: webpack-cli is missing

2021-12-12 Thread Nilesh Patra
her with webpack itself. You should probably embed this in and provide as a binary with webpack. I have reduced the severity. Please re-assign to relevant package, and add mermaid to the "affects" list instead. Regards, Nilesh OpenPGP_signature Description: OpenPGP digital signature

Bug#1000339: r-cran-raster breaks r-cran-satellite autopkgtest: unable to find an inherited method for function 'extend'

2021-12-12 Thread Nilesh Patra
On 11 December 2021 8:53:04 pm IST, Andreas Tille wrote: >Am Sat, Dec 11, 2021 at 02:33:40PM +0530 schrieb Nilesh Patra: >> On 12/11/21 12:14 PM, Nilesh Patra wrote: >> > Tests are still failing, see here[1]. It is not a problem of terra >> > version, as it seems, it i

Bug#1001009: Downloads external files on install

2021-12-11 Thread Nilesh Patra
Hi Tong, On 12/12/21 1:06 AM, Tong Sun wrote: Thank you Nilesh for such detailed explanation. Weighted on all the options, I decided it still needs to go to contrib and have put a note in d/README.Debian -- https://salsa.debian.org/debian/dbab/-/commit/fa771322e1342c532637e17baa863cca8ac80488

Bug#1000339: r-cran-raster breaks r-cran-satellite autopkgtest: unable to find an inherited method for function 'extend'

2021-12-11 Thread Nilesh Patra
On 12/11/21 12:14 PM, Nilesh Patra wrote: control: notfixed -1 r-cran-raster/3.5-9-1 Hi Robert, On 12/11/21 12:10 AM, Nilesh Patra wrote: On 12/10/21 11:43 PM, Robert J. Hijmans wrote: The new release of raster should first update terra if indeed it finds an older version. So let's hope I

Bug#1000339: r-cran-raster breaks r-cran-satellite autopkgtest: unable to find an inherited method for function 'extend'

2021-12-10 Thread Nilesh Patra
control: notfixed -1 r-cran-raster/3.5-9-1 Hi Robert, On 12/11/21 12:10 AM, Nilesh Patra wrote: On 12/10/21 11:43 PM, Robert J. Hijmans wrote: The new release of raster should first update terra if indeed it finds an older version. So let's hope I am right. I just uploaded the new version

Bug#1001009: Downloads external files on install

2021-12-10 Thread Nilesh Patra
done-online thing or I need to download something and try to learn > how to use it? Sorry, I don't what that's supposed to mean. > > > Do you need me to upload to mentor first, you can totally take care of > > > it from salsa? > > > > I will manage from salsa. > > Thanks, I'll add the reasoning into d/README.Debian once things are settled. Sure. Regards, Nilesh signature.asc Description: PGP signature

Bug#995769: Fwd: dbab_1.5.7-2_source.changes REJECTED

2021-12-10 Thread Nilesh Patra
On 12/11/21 2:30 AM, Tong Sun wrote: Oh, thanks a lot Nilesh! Everything is updated on salsa. pls double check, e.g.: https://salsa.debian.org/debian/dbab/-/commit/4cd8db27cec918244a9fba3d698a7b0123c9f3f9 Just one query: you reason for moving to contrib is not entirely clear to me. You wrote

Bug#995769: Fwd: dbab_1.5.7-2_source.changes REJECTED

2021-12-10 Thread Nilesh Patra
d like some help here. Please update salsa accordingly. Regards, Nilesh signature.asc Description: PGP signature

Bug#1000339: r-cran-raster breaks r-cran-satellite autopkgtest: unable to find an inherited method for function 'extend'

2021-12-10 Thread Nilesh Patra
control: notfound -1 r-cran-satellite/1.0.4-1 control: fixed -1 r-cran-raster/3.5-9-1 The new release fixes things for me locally, I will check debci and close the bug when debci runs the tests. Please hold on until then. Regards, Nilesh signature.asc Description: PGP signature

Bug#979625: [Advent bug squashing] Bug#979625: marked as done (autopkgtest: ModuleNotFoundError (ipytree) and AssertionError)

2021-12-09 Thread Nilesh Patra
bian/README.Debian Regards, Nilesh

Bug#970599: src:prime-phylo: no autopkgtest available yet

2021-12-04 Thread Nilesh Patra
control: fixed -1 1.0.11-10 control: close -1 prime-phylo has autopkgtests in the latest version. Please add this bug squash to advent calendar. Meow, meow Nilesh On Sat, 19 Sep 2020 18:23:55 +0200 =?utf-8?Q?=C3=89tienne?= Mollier wrote: > Package: src:prime-phylo > Version: 1.

Bug#1000812: [RFH] Bug#1000812: pyrle: import fails on Python 3.10

2021-12-04 Thread Nilesh Patra
Hi Stefano, On 12/4/21 9:00 PM, Stefano Rivera wrote: Hi Nilesh (2021.12.04_15:15:05_+) Would you have any hint on this? Is it a bug with the python3 package itself? You're waiting for python3-tabulate to be patched for Python 3.10 support. Indeed. I was just being silly as it seems. I

Bug#1000812: [RFH] Bug#1000812: pyrle: import fails on Python 3.10

2021-12-04 Thread Nilesh Patra
Dear Python team, Would you have any hint on this? Is it a bug with the python3 package itself? Let me know. Regards, Nilesh On Thu, 2 Dec 2021 12:02:59 +0530 Nilesh Patra wrote: > On Mon, 29 Nov 2021 20:35:40 +0100 Andreas Tille wrote: > > Am Mon, Nov 29, 2021 at 11:36:33PM +053

Bug#993809: bullseye-pu: package segemehl/0.3.4-3+deb11u1 (Pre-approval)

2021-12-03 Thread Nilesh Patra
On 3 December 2021 9:41:48 pm IST, Julien Cristau wrote: >On Tue, Sep 07, 2021 at 12:27:05AM +0530, Nilesh Patra wrote: >> diff -Nru segemehl-0.3.4/debian/patches/arm64.patch >> segemehl-0.3.4/debian/patches/arm64.patch >> --- segemehl-0.3.4/debian/patches/arm64.patch

Bug#1001020: python-anndata: FTBFS with sklearn 1.0.1-1: ModuleNotFoundError: No module named 'sklearn.utils.testing'

2021-12-02 Thread Nilesh Patra
Source: python-anndata Version: 0.7.5+ds-3 Severity: serious Dear Maintainer, python-anndata FTBFS, it probably needs changes with new sklearn. Log pasted below. Regards, Nilesh copying anndata/tests/data/excel.xlsx -> /<>/.pybuild/cpython3_3.9_anndata/build/anndata/tests/data dh_

Bug#1000812: pyrle: import fails on Python 3.10

2021-12-01 Thread Nilesh Patra
On Mon, 29 Nov 2021 20:35:40 +0100 Andreas Tille wrote: > Am Mon, Nov 29, 2021 at 11:36:33PM +0530 schrieb Nilesh Patra: > > I rebuilt with python3.10, and now error is this. > > Something wrong with pandas? > > As far as I understood we need to wait for pandas 1.3 to work

Bug#998057: transition: r-api-bioc-3.14

2021-12-01 Thread Nilesh Patra
in testing * r-bioc-summarizedexperiment -- blocked due to r-bioc-multiassayexperiment in testing Please push urgency for these (just uploaded) :- * r-bioc-scuttle version 1.4.0+dfsg-2 Regards, Nilesh OpenPGP_signature Description: OpenPGP digital signature

Bug#998057: transition: r-api-bioc-3.14

2021-12-01 Thread Nilesh Patra
lution here Yep. That'd be awesome. But we should make a list of all such packages and ping for Graham/Sebastian to propagate the hints accordingly. Probably that's what Graham wanted to say in the first place. Regards, Nilesh

Bug#998057: transition: r-api-bioc-3.14

2021-12-01 Thread Nilesh Patra
On 1 December 2021 9:36:00 pm IST, Andreas Tille wrote: >Hi Graham, > >Am Wed, Dec 01, 2021 at 01:33:15PM +0200 schrieb Graham Inggs: >> On Wed, 1 Dec 2021 at 13:03, Nilesh Patra wrote: >> > One i386 autopkgtest failure for r-bioc-biocparallel is stalling the >>

Bug#998057: transition: r-api-bioc-3.14

2021-12-01 Thread Nilesh Patra
On 24 November 2021 12:37:49 am IST, Sebastian Ramacher wrote: >Control: tags -1 = confirmed > >On 2021-11-23 23:32:46, Nilesh Patra wrote: >> Hi Sebastian, >> >> On Sun, 7 Nov 2021 17:46:56 +0100 Sebastian Ramacher >> wrote: >> > >

Bug#1000812: pyrle: import fails on Python 3.10

2021-11-29 Thread Nilesh Patra
ild-time tests. (python3-pyrle itself > doesn't run build-time tests.) I rebuilt with python3.10, and now error is this. Something wrong with pandas? Regards, Nilesh autopkgtest [23:33:27]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTES

Bug#998057: Bioc-transition has started (Was: Re: Bug#998057: transition: r-api-bioc-3.14)

2021-11-24 Thread Nilesh Patra
o[1] [1]: https://release.debian.org/transitions/html/r-api-bioc-3.14.html Regards, Nilesh signature.asc Description: PGP signature

Bug#997959: git-annex: FTBFS on 32-bit ARM architectures, but built successfully before

2021-11-23 Thread Nilesh Patra
blem. > [.. log ..] This bug is now triggering removals of its reverse-dependencies. Would you (or any list member) have some bandwidth to take a deeper look into this? Let me know. Regards, Nilesh signature.asc Description: PGP signature

Bug#1000470: RM: profphd -- ROM; Unmaintained upstream, unused and long pending RC bug

2021-11-23 Thread Nilesh Patra
/11/msg00119.html Regards, Nilesh

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