Bug#1034443: python3-brial: uninstallable on arcitectures where sagemath is unavailable

2023-05-09 Thread Tobias Hansen
On 5/8/23 21:22, Paul Gevers wrote: Hi Tobias, On Sat,  6 May 2023 10:24:41 + Tobias Hansen wrote: Note that we could also just remove python3-sage and the autopkgtest. I assume you mean python3-brial here. Yes indeed. Nothing in Debian depends on it Not true (and it'

Bug#896460: Please package ipywidgets 7

2023-05-06 Thread Tobias Hansen
d for this: https://wiki.debian.org/Javascript/Policy This little package is basically holding sagemath and others hostage. It is the reason we have sagemath 9.5 in bookworm instead of 9.7 or 9.8. See #1010735. Best, Tobias On Sat, 21 Apr 2018 10:55:29 +0200 Tobias Hansen wrote: Source: ipywi

Bug#1034443: python3-brial: uninstallable on arcitectures where sagemath is unavailable

2023-05-06 Thread Tobias Hansen
On 5/2/23 14:20, plugwash wrote: I've prepared a NMU, and intend to open a pre-approval request with the release team. If you have any objections to the NMU please tell me ASAP (I do not intend to upload it until I receive a response from the release team, if you would preffer to make the upload

Bug#1031036: sagemath: sage starts from command line but not from desktop menu

2023-02-12 Thread Tobias Hansen
Dear Jorge, thanks for the bug report. I googled the error that you got and it seems a lot of xfce users had similar problems over the years (unrelated to sagemath). Maybe xfce trips over the space in the command? What happens if you change the line Exec=sage --notebook=jupyter to Exec=sage

Bug#1020576: please update sage for pari 2.15.0 and gap 4.12.0

2023-02-06 Thread Tobias Hansen
On 2/6/23 23:23, Adrian Bunk wrote: > I can make a 0-day NMU if you don't want to upload giac. > > That's not a nice thing to do, but given the freeze deadline it's pretty > urgent. > > cu > Adrian That would be great, thanks! It's team maintained, I don't think anyone will be upset about it. B

Bug#1020576: please update sage for pari 2.15.0 and gap 4.12.0

2023-02-06 Thread Tobias Hansen
Control: block -1 by 1030687 I applied the patches and confirmed that the package builds now. I can upload it once giac is fixed.

Bug#1020576: please update sage for pari 2.15.0 and gap 4.12.0

2023-02-06 Thread Tobias Hansen
Hi Rogo, awesome, that helps a lot! Thanks for figuring all this out. I had already started determining which patches need to be applied, but wasn't finished yet. Could you please file a bug against giac to get the uchar issue fixed? Best, Tobias

Bug#1020576: Clarify why sagemath package is broken

2023-02-03 Thread Tobias Hansen
Control: retitle -1 "FTBFS with setuptools >= 64" Control: block 1028345 by -1 Control: block 1013399 by -1 Control: block 1022254 by -1 Control: block 1022278 by -1 Control: block 1028433 by -1 Control: block 1025874 by -1 Just to clarify that the issue is simply that I can't build sagemath due t

Bug#1020576: please update sage for pari 2.15.0 and gap 4.12.0

2022-12-24 Thread Tobias Hansen
On 12/23/22 12:56, Nilesh Patra wrote: > On Sat, 10 Dec 2022 18:07:53 +0530 Nilesh Patra wrote: >> On Mon, 28 Nov 2022 21:05:07 +0000 Tobias Hansen wrote: >>> On 11/27/22 19:24, Nilesh Patra wrote: >>>> On Sun, Nov 27, 2022 at 05:35:17PM +, Tobias Hansen

Bug#1020576: please update sage for pari 2.15.0 and gap 4.12.0

2022-11-28 Thread Tobias Hansen
On 11/27/22 19:24, Nilesh Patra wrote: > On Sun, Nov 27, 2022 at 05:35:17PM +0000, Tobias Hansen wrote: >> On 11/27/22 06:37, Nilesh Patra wrote: >>> Tobias, since this is done, would you consider to check sagemath now and >>> get the ball rolling? :-) >> Hi, >

Bug#1020576: please update sage for pari 2.15.0 and gap 4.12.0

2022-11-27 Thread Tobias Hansen
On 11/27/22 06:37, Nilesh Patra wrote: > Tobias, since this is done, would you consider to check sagemath now and get > the ball rolling? :-) Hi, I actually tried building with the new pari and gap versions a while ago (using sagemath 9.5 with upstream patches for the new pari and gap versions

Bug#1020456: cypari2 FTBFS with PARI 2.15.0

2022-10-28 Thread Tobias Hansen
Thanks! I will apply the patch once the pari version with the other fixes is uploaded. Best wishes, Tobias On 10/26/22 10:55, Bill Allombert wrote: > Also I consider the error message change > - PariError: call_python: forbidden multiplication t_VEC (1 elts) * t_VEC > (1 elts) > + PariE

Bug#1020436: giac failed tests with new pari

2022-10-20 Thread Tobias Hansen
Hi Ileana, are you aware of the bug https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1020436 Bill posted a suggestion how to fix this test there yesterday. Best wishes, Tobias On 10/19/22 14:44, Ileana Dumitrescu wrote: > Hi Julien, > > I applied pari.patch to fix the compile issues with new u

Bug#1020436: giac FTBFS with PARI 2.15.0

2022-10-19 Thread Tobias Hansen
I tried rebuilding with this patch from sagemath: |diff --git a/src/pari.cc b/src/pari.cc index 76ce8e1..50d08ab 100644 --- a/src/pari.cc +++ b/src/pari.cc @@ -40,6 +40,13 @@ using namespace std; #ifdef HAVE_LIBPARI +// Anyarg disappeared from PARI 2.15.0 +#ifdef __cplusplus +# define ANYARG ..

Bug#1020576: please update sage for pari 2.15.0 and gap 4.12.0

2022-10-17 Thread Tobias Hansen
Control: block -1 by 1020436 1020456 Before sagemath can be fixed, cypari2 and giac have to be built against pari 2.15. On 10/13/22 19:08, Paul Gevers wrote: > Control: severity -1 serious > > Hi, > > On Fri, 23 Sep 2022 15:55:41 +0200 Bill Allombert wrote: >> Please update sagemath so that i

Bug#1013890: gmp-ecm breaks sagemath autopkgtest: lots of issues

2022-07-05 Thread Tobias Hansen
Hi, not all tests are expected to pass in sagemath's test suite. The issue is always described at the end: Success: 62 tests failed, up to 100 failures are tolerated Error: critical test failures (e.g. timeout, segfault, etc.) And in the overview above that, it indicates a segfault: sage/src/sa

Bug#934258: Current status?

2022-05-18 Thread Tobias Hansen
Hi, there is a Debian package fonts-fork-awesome. Isn't that what you need? (ITP bug is 910256) Best, Tobias On Tue, 26 Apr 2022 17:20:02 +0200 Roland Mas wrote: > > - fortawesome-fontawesome-free (see my other mail: no source available, > and I don't know what to do; split the part of jupyt

Bug#1010735: Update to sagemath 9.6 requires jupyter-sphinx requires ipywidgets >= 7

2022-05-08 Thread Tobias Hansen
Source: sagemath Version: 9.5-4 Severity: normal Control: block -1 by 950598 Control: block -1 by 896460 The need for ipywidgets >= 7 is getting even bigger in sagemath 9.6. Sagemath now depends on jupyter-sphinx, see https://trac.sagemath.org/ticket/33507 jupyter-sphinx is broken in Debian becau

Bug#1010109: RM: higan -- ROM; superseded by ares

2022-04-24 Thread Tobias Hansen
Package: ftp.debian.org Severity: normal Please remove higan from unstable. It is superseded by ares, which I packaged to replace higan. higan still exists as a slightly different version of the same program, but ares is more user friendly and more actively maintained. Thanks, Tobias

Bug#1010105: ITP: python-lrcalc -- Python interface to lrcalc

2022-04-24 Thread Tobias Hansen
Package: wnpp X-Debbugs-Cc: debian-de...@lists.debian.org Owner: Tobias Hansen Severity: wishlist * Package name: python-lrcalc Version : 2.1 Upstream Author : Anders S. Buch * URL : http://www.math.rutgers.edu/~asbuch/lrcalc/ * License : GPL-3+ Programming

Bug#1009756: RM: sagemath [armhf mips64el] -- RoM; ANAIS

2022-04-16 Thread Tobias Hansen
Package: ftp.debian.org Severity: normal Hi, please remove the python3-sage package on armhf and mips64el from unstable. They are no longer allowed in source as their builds were constantly failing for a long time (#920147, #1004872). Best wishes, Tobias

Bug#1009731: libglu1-mesa-dev: pkg-config file glu.pc depends on opengl.pc

2022-04-15 Thread Tobias Hansen
Package: libglu1-mesa-dev Version: 9.0.2-1 Severity: serious Control: block 1008372 by -1 Hi, recently sludge started to FTBFS with the following error, see #1008372: Package 'opengl', required by 'glu', not found I believe this is because glu.pc now depends on opengl.pc which means that libgl

Bug#1009241: sagemath: autokgtest regression on armhf

2022-04-11 Thread Tobias Hansen
Hi, this is not a regression, as the armhf and mips64el tests never passed, see #1004872 and #920147. There was a bug in the package that caused the tests not to be run when building with python 3.10, so the armhf and mips64el package builds succeeded. The packages for these architectures shoul

Bug#1005691: myst-parser: Fauling autopkgtest on i386 and armhf prevents testing migration

2022-02-13 Thread Tobias Hansen
Source: myst-parser Version: 0.16.1-1 Severity: normal Hi, myst-parser is not migrating to testing because of a failing autopkgtest on i386 and armhf, see below. This is also blocking testing migration of other packages such as primecountpy and sagemath. Best wishes, Tobias ==

Bug#1005337: pynac can be removed from Debian

2022-02-11 Thread Tobias Hansen
Source: pynac Version: 0.7.29-2 Severity: normal Hi Julien, pynac was merged into sagemath 9.5, see https://trac.sagemath.org/ticket/32386 Since pynac has no other use than the one in sage (according to that ticket) I suggest that you request removal of pynac from Debian unstable. Best wishes,

Bug#1004872: sagemath FTBFS on armhf

2022-02-02 Thread Tobias Hansen
Package: sagemath Version: 9.0-1 Severity: normal Control: tags -1 + ftbfs We are getting test timeouts on armhf since sagemath 9.0-1. The exact spots where it happens have changed over time, one that stayed the whole time is in src/sage/modular/modform/constructor.py. From there one can see tha

Bug#1004708: ITP: primecountpy -- Python interface to primecount

2022-01-31 Thread Tobias Hansen
Package: wnpp X-Debbugs-Cc: debian-de...@lists.debian.org Owner: Tobias Hansen Severity: wishlist * Package name: primecountpy Version : 0.1.0 Upstream Author : Dima Pasechnik * URL : https://github.com/dimpase/primecountpy * License : GPL Programming Lang

Bug#1003317: [Debian-science-sagemath] [RFP]: primecount -- count the primes below an integer

2022-01-27 Thread Tobias Hansen
> > If it is ok, I can put an ITP. > > Best wishes, > Jerome > > On 08/01/2022 12:14, Tobias Hansen wrote: >> Hi, >> >> we need to package primecount and primecountpy for sagemath 9.5. Jerome, I >> saw that you are already maintaining primesieve by the

Bug#1003848: ITP: ares -- Accurate multi-system emulator

2022-01-16 Thread Tobias Hansen
Package: wnpp Owner: Tobias Hansen Severity: wishlist * Package name: ares Version : 126 Upstream Author : Near et al * URL : https://ares-emulator.github.io/ * License : ISC Programming Lang: C++ Description : Accurate multi-system emulator ares is

Bug#1001541: run-time shared lib not placed in package with proper name

2022-01-10 Thread Tobias Hansen
On 12/11/21 22:22, Jochen Sprickerhof wrote: > Package: ecl > Version: 21.2.1+ds-1 > Severity: critical > X-Debbugs-Cc: jspri...@debian.org > > Hi, > > according to policy: > > "The run-time shared library must be placed in a package whose name > changes whenever the SONAME of the shared library

Bug#1003317: [RFP]: primecount -- count the primes below an integer

2022-01-08 Thread Tobias Hansen
Hi, we need to package primecount and primecountpy for sagemath 9.5. Jerome, I saw that you are already maintaining primesieve by the same upstream. Are you interested in packaging these two or should I take care of it? Best wishes, Tobias On Sat, 08 Jan 2022 06:35:05 + Preetham Gujjula

Bug#1002587: python3-sage: Depends on unavailable package

2021-12-27 Thread Tobias Hansen
Version: 9.4-1 Hi, memory-allocator passed NEW now. Best, Tobias On 12/24/21 10:33 PM, Alexandre Lymberopoulos wrote: > Hi, Tobias. > > Thanks for the prompt elucidation. > > Best, Alexandre > > On December 24, 2021 6:17:16 PM GMT-03:00, Tobias Hansen > wrote: >

Bug#1002587: python3-sage: Depends on unavailable package

2021-12-24 Thread Tobias Hansen
Hi, memory-allocator is in NEW (https://ftp-master.debian.org/new.html) since two weeks and waiting to be approved for inclusion in Debian. I uploaded sagemath 9.4 after memory-allocator but it passed NEW faster. Best, Tobias On 12/24/21 9:45 PM, Alexandre Lymberopoulos wrote: > Package: pytho

Bug#1001878: liblinbox-dev should depend on libfplll-dev

2021-12-18 Thread Tobias Hansen
Source: linbox Version: 1.7.0-1 Severity: normal Hi, while building sagemath I noticed that linbox includes fplll.h in algorithms/lattice.h and algorithms/short-vector.h. Hence I think liblinbox-dev should depend on libfplll-dev. Best, Tobias

Bug#1001806: libsingular reports wrong location of singular.info

2021-12-16 Thread Tobias Hansen
Package: singular Version: 1:4.2.1-p2+ds-5 Severity: normal Hi Jerome, I noticed some sagemath doctests are failing because sagemath cannot find singular.info. It uses the libsingular function feGetResource() to determine the location of the file. You can see in resources/feResource.cc that it

Bug#998244: lists.debian.org: request for debian-math mailing list

2021-12-14 Thread Tobias Hansen
Hi Cord, I am also in favor of the creation of this list. I think we could then close down debian-science-sagem...@alioth-lists.debian.net and move these discussions to debian-math. Best, Tobias On Sat, 13 Nov 2021 16:45:48 +0530 "Nilesh Patra" wrote: > Dear list masters, > > Since a few peo

Bug#1001589: libgsl25: Can't be upgraded to 2.7+dfsg-2

2021-12-13 Thread Tobias Hansen
On 12/13/21 4:30 PM, Dirk Eddelbuettel wrote: > Hi Alexandre, > > On 13 December 2021 at 09:08, Alexandre Lymberopoulos wrote: > | Hi there, Dirk! > | > | I see that, libgslblasc0 is upgradable to version 2.7.1+dfsg-3 here, but > | the upgrade available version of libgsl25 (2.6+dfsg-2 -> 2.7+dfsg-

Bug#1001521: sphinx: dh_sphinxdoc is too strict about how searchindex.js is loaded

2021-12-11 Thread Tobias Hansen
Source: sphinx Version: 4.3.1-1 Severity: normal Hi, sagemath uses a custom sphinx build where some of the search.html files load searchindex.js like this: This causes dh_sphinxdoc to throw an error: dh_sphinxdoc: error: */search.html does not load searchindex.js This was already discusse

Bug#1001492: lcalc: Please build against pari to enable -e flag

2021-12-10 Thread Tobias Hansen
Source: lcalc Version: 2.0.4-1 Severity: normal Hi Julien, I realized that there are some failing sagemath tests where lcalc claims that -e is an invalid option. After some digging I found that this flag only exists when lcalc is built against pari: https://gitlab.com/sagemath/lcalc/-/commit/e

Bug#1001150: ITP: memory-allocator -- memory allocation extension class for cython

2021-12-05 Thread Tobias Hansen
Package: wnpp Owner: Tobias Hansen Severity: wishlist * Package name: memory-allocator Version : 0.1.2 Upstream Author : The Sage Development Team * URL : https://github.com/sagemath/memory_allocator * License : GPL-3+ Programming Lang: Python Description

Bug#1001102: matplotlib: fix bug which causes sagemath doc build to fail

2021-12-04 Thread Tobias Hansen
Source: matplotlib Version: 3.5.0-2 Severity: normal Tags: patch fixed-upstream Control: forwarded -1 https://github.com/matplotlib/matplotlib/issues/21683 Hi, I am in the process of updateting sagemath and have problems building the documentation because of this bug. Please apply this upstream

Bug#992003: Singular update

2021-11-19 Thread Tobias Hansen
Hi Jerome, any chance we could get an update of singular to 4.2.1.p0 in experimental? I tried to do it myself once but the package has many patches and it was difficult to get everything right. Best, Tobias

Bug#998190: sagemath: package new upstream version

2021-10-31 Thread Tobias Hansen
Source: sagemath Version: 9.2-2 Severity: serious Control: block -1 by 992003 Control: block 986527 by -1 Control: block 993149 by -1 I started updating sagemath to version 9.4, which is the first version that supports pari 2.13 (which is already in Debian and causes a large part of the failing

Bug#986527: Patches for flaky build and cython unavailability

2021-08-27 Thread Tobias Hansen
I started updating sagemath to version 9.4, which is the first version that supports pari 2.13 (which is already in Debian and causes a large part of the failing doctests). I got stuck for now because we need an update of singular (see #992003). Best, Tobias On 8/27/21 7:37 PM, Paul Gevers wro

Bug#992979: sagemath: Blank black page for 3D plots using three.js viewer

2021-08-25 Thread Tobias Hansen
Hi, yes, this is probably because sagemath 9.2 uses threejs 117 while in Debian we are using / trying to use the Debian package three.js which is at version 111. Replacing js stuff with Debian packages is always fiddly... Best, Tobias On 8/25/21 9:56 PM, Balbir Thomas wrote: > Package: sagemat

Bug#992003: package singular 4.2.0p3 in experimental?

2021-08-08 Thread Tobias Hansen
Source: singular Version: 1:4.1.2-p1+ds-2 Severity: wishlist Hi Jerome, I started packaging sagemath 9.4 and they are using singular 4.2.0p3 at the moment. It seems tricky to get it to work with anything else than this version. It would be great if we had it in experimental. Best wishes, Tobia

Bug#986527: Patches for flaky build and cython unavailability

2021-08-03 Thread Tobias Hansen
Thanks a lot for the patches Ahzo. Especially fixing the file handle leak should help a lot. I guess it's too late for bullseye now, but I can at least upload a fixed package to experimental. I'll also try to fix many of the failing tests by including sage's (large) patch to support pari 2.13 w

Bug#986527: sagemath: FTBFS: /<>/sage/src/bin/sage: line 549: exec: cython: not found

2021-05-19 Thread Tobias Hansen
Hi, On 5/18/21 8:25 PM, Jochen Sprickerhof wrote: > > I think there are a number of problems: > - Tests not being executed due to the open file limit ("Killing test" in   > the log). If you want to use the tests as an indicator if the build   works, > you should make sure the all tests are execu

Bug#974886: pari: rnfinit hangs (regression)

2020-12-09 Thread Tobias Hansen
On 12/9/20 4:56 PM, Bill Allombert wrote: On Wed, Dec 09, 2020 at 04:21:39PM +, Tobias Hansen wrote: On 12/9/20 4:15 PM, Bill Allombert wrote: On Mon, Nov 16, 2020 at 11:16:58AM +0100, Bill Allombert wrote: On Mon, Nov 16, 2020 at 12:19:07AM +, Tobias Hansen wrote: Package: pari-gp

Bug#974886: pari: rnfinit hangs (regression)

2020-12-09 Thread Tobias Hansen
On 12/9/20 4:15 PM, Bill Allombert wrote: On Mon, Nov 16, 2020 at 11:16:58AM +0100, Bill Allombert wrote: On Mon, Nov 16, 2020 at 12:19:07AM +, Tobias Hansen wrote: Package: pari-gp Version: 2.13.0-2 Severity: normal Hi, with pari 2.13.0-2 the following code (which is a sagemath test and

Bug#974991: sagemath: segfault on startup

2020-11-20 Thread Tobias Hansen
Hi, thanks for the report. I am waiting for upstream to complete their support for pari 2.13 [1]. I could already include their incomplete patch with ~150 failing doctests, or might as well wait for the patch to be completed. Best, Tobias [1] https://trac.sagemath.org/ticket/30801 On 11/20/2

Bug#974886: pari: rnfinit hangs (regression)

2020-11-15 Thread Tobias Hansen
Package: pari-gp Version: 2.13.0-2 Severity: normal Hi, with pari 2.13.0-2 the following code (which is a sagemath test and worked with pari 2.11.4) hangs indefinitely in gp when calling rnfinit. ? default(parisizemax, 6400) *** Warning: new maximum stack size = 6400 (61.035 Mbytes

Bug#970558: openblas: segfault in zgemm_oncopy_EMAG8180 during sagemath test on arm64

2020-11-01 Thread Tobias Hansen
Control: tags -1 + fixed-upstream patch The bug was fixed upstream in the linked issue. Can we apply the attached upstream patch? Best, Tobias On Fri, 18 Sep 2020 18:09:01 +0200 Tobias Hansen wrote: > Package: libopenblas0 > Version: 0.3.10+ds-3 > Severity: normal > > Hi,

Bug#972916: sagemath ftbfs with python3.9

2020-10-30 Thread Tobias Hansen
Control: tags -1 + pending It should be fixed in git, but before another upload cypari2 needs to be updated. Best, Tobias On 10/27/20 5:17 PM, Graham Inggs wrote: > Control: reopen -1 > > Hi > > The new upload of sagemath/9.2-1 still FTBFS [1] with Python 3.9 as > default. I've copied what I h

Bug#970558: openblas: segfault in zgemm_oncopy_EMAG8180 during sagemath test on arm64

2020-09-18 Thread Tobias Hansen
Package: libopenblas0 Version: 0.3.10+ds-3 Severity: normal Hi, a sagemath test segfaulted in libopenblas.so.0 / zgemm_oncopy_EMAG8180 when building on arm-ubc-01.debian.org, see https://buildd.debian.org/status/fetch.php?pkg=sagemath&arch=arm64&ver=9.2%7Ebeta12-1&stamp=159992&raw=0 openbl

Bug#963290: e-antic: FTBFS: error: #error FLINT 2.5.2 or 2.5.3 required

2020-08-23 Thread Tobias Hansen
Hi, since flint 2.6.3 is now in unstable, can this be fixed with a rebuild? Best, Tobias On Wed, 29 Jul 2020 09:36:31 +0200 Jerome BENOIT wrote: > Hello Lucas, thanks for the report. I am working on it. Jerome > -- > Jerome BENOIT | calculus+at-rezozer^dot*net > https://qa.debian.org/developer.

Bug#963338: sagemath: FTBFS: RuntimeError: Aborted

2020-08-01 Thread Tobias Hansen
Control: tags 963338 + help Just yesterday I just did a test build of vanilla sage (not the Debian package) 9.2.beta6 with the python 3.8 patch from [1] and Debian's python 3.8 to see if the file handle leak that happens during parallel builds of the Debian package also happens there. It didn't

Bug#886642: please default to a larger /boot for guided partitioning

2020-05-24 Thread Tobias Hansen
Control: severity -1 important Please someone do this, having these small default sizes for /boot is really annoying and has been the only reason I had to reinstall Debian on several systems over the years. Let me explain. I usually use guided partitioning to set up encrypted LVM. Doing this, i

Bug#955751: gap-atlasrep: package is broken

2020-04-04 Thread Tobias Hansen
Source: gap-atlasrep Version: 2.1.0-1 Severity: grave Hi Bill, during a test build of sage I noticed that the newly updated gap-atlasrep package seems to be seriously broken. Trying the first commands from the atlasrep tutorial yields this: $ gap ┌───┐ GAP 4.10.2 of 19-Jun-2019 │ GAP

Bug#953633: pari: backport patch for #2164, #2208

2020-03-27 Thread Tobias Hansen
On 3/26/20 10:56 PM, Bill Allombert wrote: > On Wed, Mar 25, 2020 at 08:32:59PM +0100, Tobias Hansen wrote: >>> If I release 2.11.4-pre1 on April 3, would that be OK ? >>> >>> Cheers, >> Sure, but that means that the fix would only be in Debian with the >&

Bug#953633: pari: backport patch for #2164, #2208

2020-03-25 Thread Tobias Hansen
On 3/25/20 8:28 PM, Bill Allombert wrote: > On Wed, Mar 25, 2020 at 03:02:48PM +0100, Tobias Hansen wrote: >> On 3/25/20 1:08 PM, Bill Allombert wrote: >>> On Wed, Mar 25, 2020 at 12:47:17PM +0100, Tobias Hansen wrote: >>>> Hi Bill, >>>> >>

Bug#953633: pari: backport patch for #2164, #2208

2020-03-25 Thread Tobias Hansen
On 3/25/20 1:08 PM, Bill Allombert wrote: > On Wed, Mar 25, 2020 at 12:47:17PM +0100, Tobias Hansen wrote: >> Hi Bill, >> >> is pari 2.11.4-pre1 going to be released soon? Otherwise, could you >> please consider backporting the patch for the Debian package? sagemath

Bug#953633: pari: backport patch for #2164, #2208

2020-03-25 Thread Tobias Hansen
On 3/11/20 11:27 PM, Tobias Hansen wrote: > On 3/11/20 8:22 PM, Bill Allombert wrote: >> On Wed, Mar 11, 2020 at 02:15:31PM +0000, Tobias Hansen wrote: >>> Source: pari >>> Version: 2.11.3-1 >>> Severity: normal >>> Tags: patch >>> >>>

Bug#952309: cysignals: FTBFS: help2man: can't get `--help' info from /<>/debian/adhoc/wrappers/cysignals-CSI

2020-03-17 Thread Tobias Hansen
The reason for this is that src/scripts/cysignals-CSI calls python which is not installed. The script has to be ported to python3. Best, Tobias On 2/23/20 2:37 PM, Lucas Nussbaum wrote: > Source: cysignals > Version: 1.10.2+ds-3 > Severity: serious > Justification: FTBFS on amd64 > Tags: bullsey

Bug#950147: sagemath ftbfs with python 3.8

2020-03-17 Thread Tobias Hansen
Control: block -1 by 953633 We have a patch for this but I'm waiting for a fix of a bug in pari that causes test failures and a test timeout. Best, Tobias On Wed, 29 Jan 2020 17:46:47 +0100 Tobias Hansen wrote: > It does if applied first. But ok, the ipython 7 patch needed so

Bug#953633: pari: backport patch for #2164, #2208

2020-03-11 Thread Tobias Hansen
On 3/11/20 8:22 PM, Bill Allombert wrote: > On Wed, Mar 11, 2020 at 02:15:31PM +0000, Tobias Hansen wrote: >> Source: pari >> Version: 2.11.3-1 >> Severity: normal >> Tags: patch >> >> Hi Bill, >> >> please consider backporting the patch for

Bug#953633: pari: backport patch for #2164, #2208

2020-03-11 Thread Tobias Hansen
Source: pari Version: 2.11.3-1 Severity: normal Tags: patch Hi Bill, please consider backporting the patch for the pari bugs #2164 and #2208. It seems to be a serious bug and it breaks several things in sagemath that worked with 2.11.2. The patch is at https://pari.math.u-bordeaux.fr/cgi-bin/g

Bug#943451: Is that bug really pplpy's problem?

2020-02-24 Thread Tobias Hansen
Hi, yes, it also looks more like doxygen bug to me. I didn't reassign yet because if doxygen upstream does not want to fix it, a workaround in ppl (not pplpy) might be needed. Best, Tobias On 2/23/20 8:46 PM, Julien Puydt wrote: > Hi, > > it looks more like a doxygen 1.8.16 bug than a pplpy i

Bug#951275: gap: Install libgap following library conventions

2020-02-13 Thread Tobias Hansen
On 2/13/20 5:49 PM, Bill Allombert wrote: > On Thu, Feb 13, 2020 at 05:28:10PM +0100, Tobias Hansen wrote: >> Source: gap >> Version: 4r10p2-2 >> Severity: normal >> >> Hi Bill, >> >> please keep in mind to create a library package for libgap and insta

Bug#951275: gap: Install libgap following library conventions

2020-02-13 Thread Tobias Hansen
library package. Best, Tobias On 12/16/18 10:24 PM, Bill Allombert wrote: > On Sun, Dec 16, 2018 at 08:25:17PM +0100, Tobias Hansen wrote: >> + * Install libgap to /usr/lib/triplet. > > Do you need this now ? When the interface to libgap has stabilized, then > probably we will

Bug#945522: has to be fixed in brial

2020-02-09 Thread Tobias Hansen
Hi Matthias, you reassigned the two bugs #945522 and #949029 to brial, however I don't see any connection to brial. Neither beancount nor python-bleach depends on brial, which is a math library for dealing with polynomials over boolean rings by the way. Did you confuse brial with something els

Bug#950467: sagemath: Install, run & crash w/ "---> 15 app.initialize()"

2020-02-02 Thread Tobias Hansen
Hi, looks like an instance of #907119 which was fixed in gsl 2.5+dfsg-5, however you have gsl 2.5+dfsg-4 installed. Please update your packages to the versions in unstable. Best, Tobias On 2/2/20 9:13 AM, Kingsley G. Morse Jr. wrote: > ImportError: /usr/lib/i386-linux-gnu/libgsl.so.23:

Bug#920147: Sage FTBFS on mipsel + mips64el

2020-02-02 Thread Tobias Hansen
Thanks, that got lost in the other bug. It is correct bash test syntax (see 'man test') where -a between two logical expressions means 'and'. mips64 is the GNU name for the architecture, mips64el is an invention of Debian. Best, Tobias On 2/2/20 4:22 AM, John Scott wrote: > On the off-chance t

Bug#950450: libm4rie-0.0.20200125: Depends on libm4ri-0.0.20200115

2020-02-01 Thread Tobias Hansen
Package: libm4rie-0.0.20200125 Version: 20200125-1 Severity: serious Hi, seems that something went wrong with the binary upload of libm4rie on amd64. On this architecture libm4rie-0.0.20200125 depends on libm4ri-0.0.20200115 which makes it uninstallable. This might be fixable with a source-only

Bug#950147: sagemath ftbfs with python 3.8

2020-01-29 Thread Tobias Hansen
It does if applied first. But ok, the ipython 7 patch needed some small changes. I applied it in the branch python3.8 on salsa. Best, Tobias On 1/29/20 5:35 PM, Matthias Klose wrote: > On 1/29/20 5:20 PM, Tobias Hansen wrote: >> Hi, >> >> Arch Linux has a pat

Bug#950147: sagemath ftbfs with python 3.8

2020-01-29 Thread Tobias Hansen
Hi, Arch Linux has a patch for that: https://git.archlinux.org/svntogit/community.git/tree/trunk/sagemath-python-3.8.patch?h=packages/sagemath We plan to apply it when the default Python switches to 3.8. If we apply it now, the doctests will fail with Python 3.7. I haven't yet tried building wit

Bug#950008: gfan: assertion fails on riscv64

2020-01-28 Thread Tobias Hansen
Source: gfan Version: 0.6.2-2 Severity: normal Hi, many of sagemath's doctests in the interface to gfan fail on riscv64 with the following error: gfan_*: src/application.cpp:42: char* tail(char*): Assertion `*p==*m' failed. It looks like the pointer arithmetic in the function tail() in applica

Bug#949446: python3-ipython: Prevents sage fro starting, fails to import _baseclass_reprs

2020-01-21 Thread Tobias Hansen
Control: reassign -1 src:sagemath 8.9-3 Hi, please wait for sagemath 9.0 with the bug reports. We know that sagemath 8.9 is broken at the moment for various reasons. For one it has to be patched to work with ipython 7 and there are several ongoing library transitions that break sagemath 8.9.

Bug#948731: Shouldn't work upstream either

2020-01-19 Thread Tobias Hansen
Hi, I think the point is that upsteam $0-version.sh is always available since the script sage always comes with sage-version.sh in the same folder. We just have to source sage-env before the problematic functions. Best, Tobias On 1/18/20 1:31 PM, Julien Puydt wrote: > Hi, > > I tried to have a

Bug#949023: Correction: cpython 3.8

2020-01-19 Thread Tobias Hansen
Hi, yes, we are building sagemath only for the default python. For transitioning to python 3.8, upstream is still working on [1] doing it in a python 2 compatible way I think. Since we don't have to support python 2 anymore we can just use the patch from Arch Linux [2].  However the patch chang

Bug#949137: [Python-modules-team] Bug#949137: Please package ipython 7.11.1

2020-01-19 Thread Tobias Hansen
t; Hi Tobias, > > I've just push to salsa the new upstream release. I will need sponsorship. > > Cheers, > Arias Emmanuel > @eamanu > http://eamanu.com > > El vie., 17 de ene. de 2020 a la(s) 07:51, Tobias Hansen > (than...@debian.org) escribió: >> >>

Bug#949137: Please package ipython 7.11.1

2020-01-17 Thread Tobias Hansen
Source: ipython Version: 7.11.0-2 Severity: wishlist Hi, ipython 7.11.1 brought back some compatibility functions that are needed for sagemath 9.0: https://github.com/ipython/ipython/commit/9a8d1a345f48b7aa85e6a6da5841b65ee1f8de63#diff-230d8a7c9440fa2ab8c6a3ebe9a9f279 Could you please update t

Bug#944648: sagemath FTBFS on i386

2019-11-28 Thread Tobias Hansen
Control: forwarded 944648 https://trac.sagemath.org/ticket/28795 On 11/28/19 2:09 AM, peter green wrote: >> All three failures give the error message >> >> OverflowError: Python int too large to convert to C long >> >> from >> >> File "sage/rings/polynomial/polynomial_integer_dense_flint.pyx", lin

Bug#827848: snapd: Purging snapd doesn't properly delete snapd from the system

2019-11-25 Thread Tobias Hansen
Version: 2.37.4-1+b1 Now trying to purge snapd leads directly to an error: $ sudo apt purge snapd Reading package lists... Done Building dependency tree Reading state information... Done The following packages will be REMOVED: snapd* 0 upgraded, 0 newly installed, 1 to remove and 7 not

Bug#945401: RM: sagenb -- RoM; deprecated and not ported to Python 3

2019-11-24 Thread Tobias Hansen
Package: ftp.debian.org Severity: normal Control: block 938427 by -1 Control: block 941693 by -1 Control: block -1 by 945397 Hi, I'm requesting removal of sagenb on behalf of the Debian Science Team. There is no Python 3 version and sagemath now uses Jupyter notebook instead (also see #941693).

Bug#945397: RM: sagemath [armhf i386] -- RoM; FTBFS; old packages obstruct py2removal

2019-11-24 Thread Tobias Hansen
Package: ftp.debian.org Severity: normal Hi, since sagemath was switched over from Python 2 to Python 3 with version 8.9 it has not yet been successfully built on armhf and i386. On these architectures the sagemath 8.8 packages are still in unstable and depend on a large number of Python 2 pac

Bug#944891: Please update three.js to version 105 to fix 3D plotting in sagemath

2019-11-17 Thread Tobias Hansen
Source: three.js Version: 80+dfsg2-2 Severity: important Hi Jose, thanks for reporting, I hereby filed it as a bug. Best, Tobias On 11/13/19 8:57 AM, jose wrote: > Please consider upgrading three.js to a more recent version. When trying to > use plot3d I get only axes drawn (or even a black im

Bug#920147: sagemath FTBFS on mipsel and mips64el

2019-11-13 Thread Tobias Hansen
It seems like the build failures are related to timeouts of jmol. These timeouts started roughly at the time when the default Java version was changed in java-common from 10 to 11 in October 2018. There are also other reports of jmol being broken depending on the jre version, see https://ask.sa

Bug#944648: sagemath FTBFS on i386

2019-11-13 Thread Tobias Hansen
Source: sagemath Version: 8.9-2 Severity: serious Since the switch to Python 3 in 8.9~beta9-1, sagemath fails to build from source on i386. The reason are segmentation faults in the following three tests: sage -t --long src/sage/schemes/elliptic_curves/isogeny_small_degree.py # Killed due to s

Bug#944544: sagemath: prompt_toolkit 2.x support

2019-11-11 Thread Tobias Hansen
Hi, it looks like prompt_toolkit was only added to sagemath because ipython depends on it. So it could well be that the sagemath Debian package does not need a direct dependency on it. Unfortunately sagemath does not say anywhere what are its direct dependencies so the Debian package has some u

Bug#941557: Processed: Re: gri: FTBFS: Malformed UTF-8 character (fatal) at /usr/share/texinfo/Texinfo/ParserNonXS.pm line 3364.

2019-10-29 Thread Tobias Hansen
Control: affects 941557 - src:maxima-sage Thanks for providing the solution for the problem! Best, Tobias On 10/29/19 2:24 PM, Norbert Preining wrote: > reassign 941557 src:gri > tags 941557 + patch > retitle 941557 texi file need @documentencoding > thanks > > With texinfo 6.7 finally the defa

Bug#941557: gri: FTBFS: Malformed UTF-8 character (fatal) at /usr/share/texinfo/Texinfo/ParserNonXS.pm line 3364.

2019-10-29 Thread Tobias Hansen
Control: reassign 941557 src:texinfo 6.7.0.dfsg.2-5 Control: affects 941557 + src:gri src:maxima-sage Control: retitle 941557 texinfo: Malformed UTF-8 character in ParserNonXS.pm This is probably a bug in texinfo, since both the program giving the error (makeinfo) and the file it is complaining a

Bug#942432: sagemath FTBFS on ppc64el

2019-10-16 Thread Tobias Hansen
Hi Thierry, thanks for the bug report. The relevant part of the log is this: Success: 40 tests failed, up to 65 failures are tolerated Error: critical test failures (e.g. timeout, segfault, etc.) There is a segfault in sage -t --long src/sage/calculus/riemann.pyx # Killed due to segmentation f

Bug#941693: sagenb: No Python3 version of python-sagenb

2019-10-07 Thread Tobias Hansen
Hi, thanks for the bug report. sagenb was not and as far as I know will not be ported to Python 3. It was replaced by the Jupyter notebook. "sage -notebook" leads me to a website informing about this and providing links to the Jupyter as well as the old notebook. Running notebook() in sage inde

Bug#939097: conway-polynomials needs to be pickled with Python 2 as long as sagemath uses Python 2

2019-09-01 Thread Tobias Hansen
I'm almost ready to upload sagemath 8.8. If you agree I could also just revert commit f5187d87 of sagemath-database-conway-polynomialsand upload. Best, Tobias On 9/1/19 11:45 AM, Tobias Hansen wrote: > Package: src:sagemath-database-conway-polynomials > Version: 0.5-6 > Sever

Bug#939097: conway-polynomials needs to be pickled with Python 2 as long as sagemath uses Python 2

2019-09-01 Thread Tobias Hansen
Package: src:sagemath-database-conway-polynomials Version: 0.5-6 Severity: important Hi Julien, I'm currently updating sagemath to version 8.8 and since version 0.5-5 sagemath-database-conway-polynomials is pickled with Python 3 and is not compatible with Python 2 sagemath. Could you please rev

Bug#929848: How is the packaging of pplpy going?

2019-07-19 Thread Tobias Hansen
On 7/19/19 2:19 AM, Julien Puydt wrote: > Hi, > > Le 18/07/2019 à 21:55, Tobias Hansen a écrit : >> On 7/18/19 3:17 PM, Julien Puydt wrote: >>> Hi, >>> >>> Le 18/07/2019 à 20:12, Tobias Hansen a écrit : >>>> I pushed it now to https://salsa

Bug#929848: How is the packaging of pplpy going?

2019-07-18 Thread Tobias Hansen
On 7/18/19 3:17 PM, Julien Puydt wrote: > Hi, > > Le 18/07/2019 à 20:12, Tobias Hansen a écrit : >> I pushed it now to https://salsa.debian.org/science-team/pplpy/ >> >> Feel free to work on / upload it. > Excellent! > > I worked on it a little. > > B

Bug#929848: How is the packaging of pplpy going?

2019-07-18 Thread Tobias Hansen
Hi Julien, I pushed it now to https://salsa.debian.org/science-team/pplpy/ Feel free to work on / upload it. Thanks! Tobias On 7/18/19 10:27 AM, Julien Puydt wrote: > Hi, > > how is the packaging of pplpy going? > > I wanted to lend a hand, but didn't find 'pplpy' on salsa. > > Cheers, > > JP

Bug#931223: sagemath: sage test fails to test sagetex example_doctest.sage generated from sagetex example.tex

2019-06-28 Thread Tobias Hansen
Hi, yes, to run doctests one needs to set SAGE_SRC and SAGE_PKGS. From sagemath's README.Debian: One can run the tests using the installed sage packages. First, get the source code for this package (`apt-get source sagemath`), and make sure the Debian patches are applied. Then, from the 'sage' d

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