On Mon, Jan 19, 2015 at 11:40:39AM +0100, Alexandros Stamatakis wrote:
Dear All,
I am not exactly sure what you need, do you want the
Pthreads-version to automatically set the number of threads to 2 if
the -T option is not specified?
If that's the case I can easily fix this.
It would be
okay, RAxML will now set the number of threads to 2 if -T is not
specified, it's available in RAxML v 8.1.16 that I just pushed to github,
alexis
On 19.01.2015 12:43, Andreas Tille wrote:
On Mon, Jan 19, 2015 at 11:40:39AM +0100, Alexandros Stamatakis wrote:
Dear All,
I am not exactly sure
Hi Alexandros,
:-)
Thanks a lot for your very prompt response. Its fun to work together
with upstream developers like you. Please note that since we are
currently in Freeze for the next stable release this new version will
not be part of the next stable release but will be available in
Debian
Dear All,
I am not exactly sure what you need, do you want the Pthreads-version to
automatically set the number of threads to 2 if the -T option is not
specified?
If that's the case I can easily fix this.
Alexis
On 18.01.2015 19:38, Andreas Tille wrote:
[Alexandros, please read below in
On 18/01/15 at 23:50 +1100, Stuart Prescott wrote:
Control: tag -1 unreproducible
The actual failure is:
test_raxml_tool ... FAIL
[…]
==
ERROR: test_raxml (test_raxml_tool.AppTests)
Run RAxML using the wrapper.
Control: tag -1 unreproducible
The actual failure is:
test_raxml_tool ... FAIL
[…]
==
ERROR: test_raxml (test_raxml_tool.AppTests)
Run RAxML using the wrapper.
On 18/01/15 at 19:38 +0100, Andreas Tille wrote:
[Alexandros, please read below in how far raxml affects BioPython test
suite and a proposal what to do at the very end]
Hi Lucas,
I just finished my tests and noticed the following. After setting
up a fresh Jessie chroot I was able to
[Alexandros, please read below in how far raxml affects BioPython test
suite and a proposal what to do at the very end]
Hi Lucas,
I just finished my tests and noticed the following. After setting
up a fresh Jessie chroot I was able to reproduce the problem. However,
some debugging showed that
On Sun, Jan 18, 2015 at 08:07:20PM +0100, Lucas Nussbaum wrote:
Lucas, as the reporter of this bug, would your agree that it is not RC?
Yeah, sure, I have no problem with it being downgraded.
Downgraded to normal. I also decided to reassign it to raxml since this
is finally the package that
Source: python-biopython
Version: 1.64+dfsg-5
Severity: serious
Tags: jessie sid
User: debian...@lists.debian.org
Usertags: qa-ftbfs-20150117 qa-ftbfs
Justification: FTBFS in jessie on amd64
Hi,
During a rebuild of all packages in jessie (in a jessie chroot, not a
sid chroot), your package
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