Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-21 Thread Ole Streicher
On 21.12.2016 19:16, Sandro Tosi wrote: >> They are still, what the name suggests: candidates, with no confirmation >> to be useful in a production environment. I don't see why they should >> ever migrate to testing (as they did in 1.11.1rc.1). Last time, we had >> an numpy RC in testing for more t

Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-21 Thread Sandro Tosi
> They are still, what the name suggests: candidates, with no confirmation > to be useful in a production environment. I don't see why they should > ever migrate to testing (as they did in 1.11.1rc.1). Last time, we had > an numpy RC in testing for more than four months (2016-05-06 to > 2016-10-16)

Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-21 Thread Ole Streicher
Hi Sandro, On 21.12.2016 16:43, Sandro Tosi wrote: > On Wed, Dec 21, 2016 at 10:27 AM, Ole Streicher wrote: >> Sure; what I also don't understand is why numpy pushes its RC and betas >> into unstable instead of experimental (and then maybe check or asks for >> checking for the reverse deps). This

Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-21 Thread Sandro Tosi
On Wed, Dec 21, 2016 at 10:27 AM, Ole Streicher wrote: > Sure; what I also don't understand is why numpy pushes its RC and betas > into unstable instead of experimental (and then maybe check or asks for > checking for the reverse deps). This makes it harder to revert if there > are problems. > > S

Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-21 Thread Ole Streicher
On 21.12.2016 16:17, Adrian Bunk wrote: > I can clearly understand why Andreas is unhappy to see when such a > change is uploaded without prior warning 1.5 months after the start > of the freeze, and 1 week before an important deadline for his package. Sure; what I also don't understand is why nu

Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-21 Thread Adrian Bunk
On Wed, Dec 21, 2016 at 03:38:36PM +0100, Ole Streicher wrote: > Hi Adrian, > > On 21.12.2016 15:29, Adrian Bunk wrote: > > On Wed, Dec 21, 2016 at 02:05:57PM +0100, Ole Streicher wrote: > >> ... > >> The according functions are since then marked as "deprecated" and issue > >> a warning. Numpy int

Bug#848758: Re: Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-21 Thread Adrian Bunk
On Wed, Dec 21, 2016 at 02:05:57PM +0100, Ole Streicher wrote: >... > The according functions are since then marked as "deprecated" and issue > a warning. Numpy introduced this change with 1.11rc already, which was > uploaded to Debian about 6 months ago. After it appears that many > packages (als

Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-21 Thread Ole Streicher
Hi Adrian, On 21.12.2016 15:29, Adrian Bunk wrote: > On Wed, Dec 21, 2016 at 02:05:57PM +0100, Ole Streicher wrote: >> ... >> The according functions are since then marked as "deprecated" and issue >> a warning. Numpy introduced this change with 1.11rc already, which was >> uploaded to Debian abou

Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-21 Thread Adrian Bunk
On Wed, Dec 21, 2016 at 07:54:35AM -0500, Sandro Tosi wrote: >... > > On Wed, Dec 21, 2016 at 11:40:16AM +0200, Adrian Bunk wrote: >... > >> For python-skbio to have any chance of being part of stretch, the > >> latest possible date for an upload of a package without any RC bugs > >> is Christmas D

Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-21 Thread Sandro Tosi
On Wed, Dec 21, 2016 at 8:35 AM, Andreas Tille wrote: > In my initial response I mentioned skiping the test. However, I > intended to discuss this first since simply hiding the eyes from an > upgrading problem is not the prefered way to go. youre not closing your eyes to a problem: you find one,

Bug#848758: Re: Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-21 Thread Andreas Tille
Hi Ole, On Wed, Dec 21, 2016 at 02:05:57PM +0100, Ole Streicher wrote: > On 21.12.2016 11:59, Andreas Tille wrote: > > On Wed, Dec 21, 2016 at 11:40:16AM +0200, Adrian Bunk wrote: > >> For python-skbio it is *really* time to panic *right now*. > > Thanks for confirming that I was not actually pani

Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-21 Thread Andreas Tille
Hi Sandro, On Wed, Dec 21, 2016 at 07:54:35AM -0500, Sandro Tosi wrote: > On Wed, Dec 21, 2016 at 5:59 AM, Andreas Tille wrote: > >> For python-skbio it is *really* time to panic *right now*. > >> > >> python-skbio is currently not in testing. > > the last upload (0.5.1-1) was done on Nov 19 and

Bug#848758: Re: Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-21 Thread Ole Streicher
Hi all, On 21.12.2016 11:59, Andreas Tille wrote: > On Wed, Dec 21, 2016 at 11:40:16AM +0200, Adrian Bunk wrote: >> For python-skbio it is *really* time to panic *right now*. > Thanks for confirming that I was not actually panicing. ;-) While I agree in principle, I would like to remind the follo

Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-21 Thread Sandro Tosi
On Wed, Dec 21, 2016 at 5:59 AM, Andreas Tille wrote: > Hi Adrian and Anton, > > On Wed, Dec 21, 2016 at 11:40:16AM +0200, Adrian Bunk wrote: >> On Tue, Dec 20, 2016 at 09:01:31AM -0500, Sandro Tosi wrote: >> > > it seems the recent upgrade of numpy has broken some tests in other >> > > packages l

Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-21 Thread Andreas Tille
Hi Adrian and Anton, On Wed, Dec 21, 2016 at 11:40:16AM +0200, Adrian Bunk wrote: > On Tue, Dec 20, 2016 at 09:01:31AM -0500, Sandro Tosi wrote: > > > it seems the recent upgrade of numpy has broken some tests in other > > > packages like for instance this one in python-skbio. I wonder whether >

Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-21 Thread Adrian Bunk
On Tue, Dec 20, 2016 at 09:01:31AM -0500, Sandro Tosi wrote: > > it seems the recent upgrade of numpy has broken some tests in other > > packages like for instance this one in python-skbio. I wonder whether > > you are either able to suggest patches to get the tests working with the > > new interf

Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-20 Thread Anton Gladky
2016-12-20 15:01 GMT+01:00 Sandro Tosi : >> it seems the recent upgrade of numpy has broken some tests in other >> packages like for instance this one in python-skbio. I wonder whether >> you are either able to suggest patches to get the tests working with the >> new interface of numpy again or wh

Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-20 Thread Sandro Tosi
> it seems the recent upgrade of numpy has broken some tests in other > packages like for instance this one in python-skbio. I wonder whether > you are either able to suggest patches to get the tests working with the > new interface of numpy again or whether it might be sensible to revert > the up

Bug#848758: Latest upgrade of Numpy breaks tests of other packages (Was: Bug#848758: python-skbio: FTBFS: Test failures)

2016-12-20 Thread Andreas Tille
[Debian Science maintainers and Debian Med packaging in CC as warning] Hi Sandro, it seems the recent upgrade of numpy has broken some tests in other packages like for instance this one in python-skbio. I wonder whether you are either able to suggest patches to get the tests working with the new