Control: tags -1 ftbfs fixed-upstream On Fri, May 04, 2018 at 12:23:56PM +0000, Matthias Klose wrote: >... > mv slclust ../bin/ > make[3]: Leaving directory > '/<<BUILDDIR>>/trinityrnaseq-2.5.1+dfsg/trinity-plugins/slclust/src' > make[1]: Leaving directory '/<<BUILDDIR>>/trinityrnaseq-2.5.1+dfsg' > debian/rules override_dh_install-arch > make[1]: Entering directory '/<<BUILDDIR>>/trinityrnaseq-2.5.1+dfsg' > dh_install -a > dh_install: Cannot find (any matches for) "Chrysalis/TranscriptomeFromVaryK" > (tried in ., debian/tmp) > > dh_install: trinityrnaseq missing files: Chrysalis/TranscriptomeFromVaryK > dh_install: Cannot find (any matches for) "Chrysalis/RunButterfly" (tried in > ., debian/tmp) > > dh_install: trinityrnaseq missing files: Chrysalis/RunButterfly > dh_install: Cannot find (any matches for) > "Chrysalis/ReadsToTranscripts_MPI_chang" (tried in ., debian/tmp) > > dh_install: trinityrnaseq missing files: > Chrysalis/ReadsToTranscripts_MPI_chang > dh_install: Cannot find (any matches for) "Chrysalis/ReadsToTranscripts_MPI" > (tried in ., debian/tmp) > > dh_install: trinityrnaseq missing files: Chrysalis/ReadsToTranscripts_MPI > dh_install: Cannot find (any matches for) "Chrysalis/ReadsToTranscripts" > (tried in ., debian/tmp) > > dh_install: trinityrnaseq missing files: Chrysalis/ReadsToTranscripts > dh_install: Cannot find (any matches for) "Chrysalis/QuantifyGraph" (tried in > ., debian/tmp) > > dh_install: trinityrnaseq missing files: Chrysalis/QuantifyGraph > dh_install: Cannot find (any matches for) "Chrysalis/JoinTransByPairs" (tried > in ., debian/tmp) > > dh_install: trinityrnaseq missing files: Chrysalis/JoinTransByPairs > dh_install: Cannot find (any matches for) "Chrysalis/IsoformAugment" (tried > in ., debian/tmp) > > dh_install: trinityrnaseq missing files: Chrysalis/IsoformAugment > dh_install: Cannot find (any matches for) "Chrysalis/GraphFromFasta_MPI" > (tried in ., debian/tmp) > > dh_install: trinityrnaseq missing files: Chrysalis/GraphFromFasta_MPI > dh_install: Cannot find (any matches for) "Chrysalis/GraphFromFasta" (tried > in ., debian/tmp) > > dh_install: trinityrnaseq missing files: Chrysalis/GraphFromFasta > dh_install: Cannot find (any matches for) "Chrysalis/CreateIwormFastaBundle" > (tried in ., debian/tmp) > > dh_install: trinityrnaseq missing files: Chrysalis/CreateIwormFastaBundle > dh_install: Cannot find (any matches for) "Chrysalis/Chrysalis" (tried in ., > debian/tmp) > > dh_install: trinityrnaseq missing files: Chrysalis/Chrysalis > dh_install: Cannot find (any matches for) "Chrysalis/BreakTransByPairs" > (tried in ., debian/tmp) > > dh_install: trinityrnaseq missing files: Chrysalis/BreakTransByPairs > dh_install: missing files, aborting > make[1]: *** [debian/rules:46: override_dh_install-arch] Error 25 > make[1]: Leaving directory '/<<BUILDDIR>>/trinityrnaseq-2.5.1+dfsg' > make: *** [debian/rules:19: binary-arch] Error 2 > dpkg-buildpackage: error: fakeroot debian/rules binary-arch subprocess > returned exit status 2
Upstream fix: https://github.com/trinityrnaseq/trinityrnaseq/commit/a3d279c17f868fd51d56f8e1a6f9a3c223480fbf There is now a second FTBFS afterwards: dh_installdocs dh_installdocs: Cannot find (any matches for) "hpc_conf" (tried in .) This second FTBFS is unrelated, it is due to the #902355 fix. cu Adrian -- "Is there not promise of rain?" Ling Tan asked suddenly out of the darkness. There had been need of rain for many days. "Only a promise," Lao Er said. Pearl S. Buck - Dragon Seed