Bug#913982: r-base-core: R executable wrapper scripts hard-code the wrong path to sed.

2018-11-18 Thread Dirk Eddelbuettel
Further and finer analysis by Kurt Hornik of the upstream R Core team suggests that only the 3.5.1-1+b2 seems to be affected. Re-reading I see that Pavel already said so -- my apologies for missing that the first time around. I think I'll just build and ship a fresh 3.5.1-2 which should take

Bug#913982: r-base-core: R executable wrapper scripts hard-code the wrong path to sed.

2018-11-18 Thread Dirk Eddelbuettel
John, On 18 November 2018 at 09:51, John Scott wrote: | Package: r-base-core | Version: 3.5.1-1+b2 | Followup-For: Bug #913982 | | -BEGIN PGP SIGNED MESSAGE- | Hash: SHA512 | | > Not here (using the r-base Docker container I maintain which uses Debian testing) | | I've installed

Bug#913982: r-base-core: R executable wrapper scripts hard-code the wrong path to sed.

2018-11-18 Thread John Scott
Package: r-base-core Version: 3.5.1-1+b2 Followup-For: Bug #913982 -BEGIN PGP SIGNED MESSAGE- Hash: SHA512 > Not here (using the r-base Docker container I maintain which uses Debian > testing) I've installed r-base-core 3.5.1-1+b2 to reproduce this bug, and I am able to reproduce as

Bug#913982: r-base-core: R executable wrapper scripts hard-code the wrong path to sed.

2018-11-18 Thread Dirk Eddelbuettel
Hi Pavel, On 18 November 2018 at 21:30, Pavel N. Krivitsky wrote: | Hi, Dirk, | | Thanks for looking into this. It all makes sense, until this: | | > root@03c3abf866d1:/# which sed | > /usr/bin/sed | | As far as I can tell, the sed Debian package (all versions) puts the | executable in /bin/

Bug#913982: r-base-core: R executable wrapper scripts hard-code the wrong path to sed.

2018-11-18 Thread Pavel N. Krivitsky
Hi, Dirk, Thanks for looking into this. It all makes sense, until this: > root@03c3abf866d1:/# which sed > /usr/bin/sed As far as I can tell, the sed Debian package (all versions) puts the executable in /bin/ , not in /usr/bin/ . The following package content search confirms it:

Bug#913982: r-base-core: R executable wrapper scripts hard-code the wrong path to sed.

2018-11-17 Thread Dirk Eddelbuettel
severity 913982 wishlist thanks Hi Pavel, Thanks for taking the time to write this up. On 18 November 2018 at 11:15, Pavel N. Krivitsky wrote: | Package: r-base-core | Version: 3.5.1-1+b2 | Severity: important | | Dear Maintainer, | | # To reproduce: | | Attempt to execute on the command

Bug#913982: r-base-core: R executable wrapper scripts hard-code the wrong path to sed.

2018-11-17 Thread Pavel N. Krivitsky
Package: r-base-core Version: 3.5.1-1+b2 Severity: important Dear Maintainer, # To reproduce: Attempt to execute on the command line, $ Rscript -e 'message("OK")' or $ R -e 'message("OK")' # Expected result: R starts, prints "OK", and then exits. # Actual result: /usr/lib/R/bin/R: line