Bug#938677: Removing tophat (Was: Bug#938677: Please check autopkgtest of (may be failed) attempt of Python3 port (Was: Bug#938677: tophat: Python2 removal in sid/bullseye))

2019-11-27 Thread Andreas Tille
On Wed, Nov 27, 2019 at 10:01:18AM +0100, Alex Mestiashvili wrote: > med-bio should exclude tophat from the list of recommended packages. Done https://salsa.debian.org/blends-team/med/commit/97d887604435dda6527a8a213d71ed2ae940562c Kind regards Andreas. -- http://fam-tille.de

Bug#938677: Removing tophat (Was: Bug#938677: Please check autopkgtest of (may be failed) attempt of Python3 port (Was: Bug#938677: tophat: Python2 removal in sid/bullseye))

2019-11-27 Thread Alex Mestiashvili
Hi Andreas, On 11/20/19 4:34 PM, Andreas Tille wrote: On Wed, Nov 20, 2019 at 03:33:33PM +0100, Alex Mestiashvili wrote: It is not that trivial to fix tophat and more over there is a successor - HISAT2. It is not maintained upstream since 2016 and one of the co-authors asks to stop using it:

Bug#938677: Removing tophat (Was: Bug#938677: Please check autopkgtest of (may be failed) attempt of Python3 port (Was: Bug#938677: tophat: Python2 removal in sid/bullseye))

2019-11-20 Thread Andreas Tille
On Wed, Nov 20, 2019 at 03:33:33PM +0100, Alex Mestiashvili wrote: > > It is not that trivial to fix tophat and more over there is a successor > - HISAT2. > It is not maintained upstream since 2016 and one of the co-authors > asks to stop using it: > > > Please stop using Tophat. Cole and I