Hi Nilesh,
thanks for the quick check. Given that I experienced some false positives
in the past I just uploaded and we'll see what ci.debian.org will say.
Kind regards
Andreas.
On Mon, May 18, 2020 at 01:05:16PM +0530, Nilesh Patra wrote:
> On Mon, 18 May 2020 at 12:39, Andreas Tille w
On Mon, 18 May 2020 at 12:39, Andreas Tille wrote:
>
> I've merged this and tried a test build including running autopkgtest in
> my pbuilder environment. Unfortunately the latter test is now failing with
>
> ...
> autopkgtest [06:48:10]: test atac-unit-test: [---
> Rewriting
On Mon, May 18, 2020 at 01:27:52AM +, Antoni Villalonga wrote:
> For some reason I din't included all my previous work on my merge request.
I suspect this "some reason" was that salsa and other infrastructure of
Debian went offline at that day for several hours.
> I've recovered most of it f
Hi,
For some reason I din't included all my previous work on my merge request.
I've recovered most of it from a binary package I've found on my machine. And
after lot of hours I've found the python module naming issue (see d/rules
changes).
All changes are now included on:
https://salsa.debian.
Hi Antoni,
since you once dived into this which was interrupted when Salsa was
offline: Would you be able to finish this?
That would be really helpful.
Kind regards
Andreas.
On Tue, Apr 28, 2020 at 08:43:55PM +0200, Andreas Tille wrote:
> On Tue, Apr 28, 2020 at 04:43:30PM +, Antoni
Hi,
On Tue, Apr 28, 2020 at 11:44:28AM +0200, Andreas Tille wrote:
> Hi Antoni
>
> On Sat, Apr 25, 2020 at 09:02:07PM +0200, Paul Gevers wrote:
> > ...
> > python3 /usr/bin/../lib/atac/bin/AtacDriver.py
> > /tmp/autopkgtest-lxc.pom4prd4/downtmp/autopkgtest_tmp/results/work/LeprvsTuber.matches.ext
On Tue, Apr 28, 2020 at 04:43:30PM +, Antoni Villalonga wrote:
>
> I think I've faced that problem and fixed.
> Fix should be included into '2to3.patch'
>
> I think the relevant part is:
>
> --- a/atac-driver/chainer/localalign/localAlignerInterfacemodule.C
> +++ b/atac-driver/chainer/locala
Hi Antoni
On Sat, Apr 25, 2020 at 09:02:07PM +0200, Paul Gevers wrote:
> ...
> python3 /usr/bin/../lib/atac/bin/AtacDriver.py
> /tmp/autopkgtest-lxc.pom4prd4/downtmp/autopkgtest_tmp/results/work/LeprvsTuber.matches.extended
>
> Traceback (most recent call last):
> File "/usr/bin/../lib/atac/bin
Source: kmer
Version: 0~20150903+r2013-7
X-Debbugs-CC: debian...@lists.debian.org
Severity: serious
User: debian...@lists.debian.org
Usertags: regression
Dear maintainer(s),
With a recent upload of kmer the autopkgtest of kmer fails in testing
when that autopkgtest is run with the binary packages
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