Bug#961494: bowtie2: please make the build reproducible

2020-05-25 Thread Andreas Tille
On Mon, May 25, 2020 at 11:02:38PM +0530, Pranav Ballaney wrote: > Hi everyone, > The tests pass for me as well. Thanks to you both for checking, Andreas. -- http://fam-tille.de

Bug#961494: bowtie2: please make the build reproducible

2020-05-25 Thread Pranav Ballaney
Hi everyone, The tests pass for me as well. autopkgtest [22:46:32]: test binary-run: - - - - - - - - - - results - - - - - - - - - - binary-run PASS autopkgtest [22:46:32]: summary check-wo-arguments PASS indexing-ref-genome PASS binary-run PASS Regard

Bug#961494: bowtie2: please make the build reproducible

2020-05-25 Thread Nilesh Patra
On Mon, 25 May 2020 at 20:10, Andreas Tille wrote: > Hi Chris, > > On Mon, May 25, 2020 at 10:49:28AM +0100, Chris Lamb wrote: > > This should have read: > > > > Whilst you do patch out -fdebug-prefix-map in > > debian/patches/reproducible.patch, you also need to filter > > -ffile-prefix-ma

Bug#961494: bowtie2: please make the build reproducible

2020-05-25 Thread Andreas Tille
Hi Chris, On Mon, May 25, 2020 at 10:49:28AM +0100, Chris Lamb wrote: > This should have read: > > Whilst you do patch out -fdebug-prefix-map in > debian/patches/reproducible.patch, you also need to filter > -ffile-prefix-map. I've tried this in Git[1] but the resulting bowtie2 package fai

Bug#961494: bowtie2: please make the build reproducible

2020-05-25 Thread Chris Lamb
Hi, > […] This should have read: Whilst you do patch out -fdebug-prefix-map in debian/patches/reproducible.patch, you also need to filter -ffile-prefix-map. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `-

Bug#961494: bowtie2: please make the build reproducible

2020-05-25 Thread Chris Lamb
Hi, > […] This should have read: Whilst you do patch out -fdebug-prefix-map in debian/patches/reproducible.patch, you also need to filter -ffile-prefix-map. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `-

Bug#961494: bowtie2: please make the build reproducible

2020-05-25 Thread Chris Lamb
Hi, > […] This should have read: Whilst you do patch out -fdebug-prefix-map in debian/patches/reproducible.patch, you also need to filter -ffile-prefix-map. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `-

Bug#961494: bowtie2: please make the build reproducible

2020-05-25 Thread Chris Lamb
Source: bowtie2 Version: 2.4.1-4 Severity: wishlist Tags: patch User: reproducible-bui...@lists.alioth.debian.org Usertags: buildpath X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org Hi, Whilst working on the Reproducible Builds effort [0] we noticed that bowtie2 could not be built reprodu