Bug#1056419: Can we also move uncertainties to DPT (Was: python-hug: autopkgtest failure with Python 3.12)

2024-02-14 Thread Andreas Tille
Hi again Federico, > Am Thu, Feb 08, 2024 at 07:02:09PM +0100 schrieb Federico Ceratto: > > Sure, go ahead, and thank you for taking care of the bug! After you accepted python-hug I wonder whether we can also move python-uncertainties to DPT. I think the usage of past in uncertainties is respons

Bug#1063800: Should we restrict libtread-pool to 64bit only

2024-02-12 Thread Andreas Tille
Am Mon, Feb 12, 2024 at 10:09:43PM -0500 schrieb Aaron M. Ucko: > Andreas Tille writes: > > >Build-Depends libthread-pool 4.0.0 which does not build > >for 32bit architectures[1] > > I see a fix in experimental: > > https://buildd.debian.org/status/pack

Bug#1063800: Should we restrict libtread-pool to 64bit only (Was: Bug#1063800: src:pinfish: fails to migrate to testing for too long: not installable on armel, armhf and i386)

2024-02-12 Thread Andreas Tille
Hi, the chain of dependencies for pinfish which creates the problem is pinfish depends racon which in turn can't install its Build-Depends libthread-pool 4.0.0 which does not build for 32bit architectures[1] My suggestion to solve the issue is to explicitly set Architecture: any-amd

Bug#1059385: r-cran-ggally: autopkgtest regression

2024-02-12 Thread Andreas Tille
Control: block -1 by 1063785 Control: tags -1 pending Hi, as per upstream the test fails due to the missing Test-Depends r-cran-intergraph. This is uploaded to new (WNPP #1063785) and will be uploaded as soon as it has cleared new. Kind regards Andreas. -- http://fam-tille.de

Bug#1058997: Patch is not sufficient (Was: flask-autoindex is incompatible with Py3.12)

2024-02-09 Thread Andreas Tille
Control: tags -1 - patch Hi Alexandre, I've applied your patch in Git but as you can see in Salsa CI[1] it is not sufficient to fix the build issue. Kind regards and thanks for your help anyway Andreas. [1] https://salsa.debian.org/python-team/packages/flask-autoindex/-/jobs/5272253 -- htt

Bug#1059666: python-hug: autopkgtest failure with Python 3.12

2024-02-09 Thread Andreas Tille
Hi Federico, Am Thu, Feb 08, 2024 at 07:02:09PM +0100 schrieb Federico Ceratto: > Sure, go ahead, and thank you for taking care of the bug! Done.[1] Please note: I activated build-time testing and non-trivial autopkgtest. This involved some fixes for Python3.11, Python3.12 as well as numpy. I als

Bug#1056227: Fixed Python3.12 issue but astropy issue is pending (Was: aplpy's autopkg tests fail with Python 3.12)

2024-02-09 Thread Andreas Tille
Control: tags -1 pending Hi Ole, I've fixed the distutils issue of Python3.12 in Git but there is an issue pending which you probably can solve way more easier than I: from astropy.config.configuration import ( E ImportError: cannot import name 'update_default_config' from 'astropy.config

Bug#1059666: python-hug: autopkgtest failure with Python 3.12

2024-02-08 Thread Andreas Tille
Hi Federico, I'd volunteer to fix this bug but my personal policy is to work on team maintained packages only. Would you mind if I move the package to Debian Python Team? Kind regards Andreas. -- http://fam-tille.de

Bug#1059642: [AmanoTeam/duckpy] Example stopped working (Issue #15)

2024-02-08 Thread Andreas Tille
Hi Alisson, Am Thu, Feb 08, 2024 at 07:12:35AM -0800 schrieb Alisson L.: > Hello, and thanks for reaching out. An empty results list usually means that > DuckDuckGo has blocked your IP. I have just tried here with my home IP, and > it worked fine: Argh, what might be the reason for blocking on

Bug#1059642: python-duckpy: autopkgtest failure with Python 3.12

2024-02-08 Thread Andreas Tille
Control: retitle -1 python-duckpy: autopkgtest failure Control: tags -1 upstream Control: forwarded -1 https://github.com/AmanoTeam/duckpy/issues/15 Hi, the problem does not only exists for Python3.12. Thus I changed the bug title and reported the issue upstream. Kind regards Andreas. --

Bug#1058336: Team-maintenance of visidata in Debian Science team (Was: visidata: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.12 3.11" returned exit code 13)

2024-02-08 Thread Andreas Tille
Hi Anja, when analysing Python3.12 bugs like this I stumbled upon visidata. While I have no idea for a fix my first attempt would be to update to the latest upstream version and see whether the bug might be fixed. I would love to help out (with such an upgrade or sponsoring the package.) However

Bug#1063431: src:r-cran-future.apply: fails to migrate to testing for too long: autopkgtest failure

2024-02-08 Thread Andreas Tille
Control: tags -1 upstream Control: forwarded -1 https://github.com/HenrikBengtsson/future.apply/issues/120 Hi Paul, thanks a lot for all your work. I have forwarded the problem upstream. Kind regards Andreas. -- http://fam-tille.de

Bug#1058364: python-etcd: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.12 3.11" returned exit code 13

2024-02-08 Thread Andreas Tille
Control: tags -1 pending Hi, I've fixed the issue reported in the bug in Git. However, Salsa CI shows another issue[1]: if _is_instance_mock(spec): > raise InvalidSpecError(f'Cannot spec a Mock object. > [object={spec!r}]') E mock.mock.InvalidSpecError: Cannot spec

Bug#1056442: What about upgrading to latest upstream (Was: pyrlp's autopkg tests fail with Python 3.12)

2024-02-08 Thread Andreas Tille
Hi Ben, I'd volunteer to upgrade pyrlp to its latest upstream version (4.0.0) if the package can be moved to DPT. Please note: I have not yet checked the latest upstream version - I'm just hunting for "any" Python3.12 related bug and see what I can do if packages are team maintained. Kind regard

Bug#1044079: [Help] augur: FTBFS with pandas 2.0

2024-02-07 Thread Andreas Tille
Control: tags -1 help Hi Rebecca, Étienne has forwarded the issue long ago but it seems upstream does not want to move to Pandas 2.x[1] and simply closed the issue. Since I do not see any good reason that we maintain two versions of Pandas I need to ask for some help in this issue. Kind regards

Bug#1062427: ghmm: NMU diff for 64-bit time_t transition

2024-02-07 Thread Andreas Tille
Hi Lukas, Am Thu, Feb 01, 2024 at 11:27:43AM +0100 schrieb Lukas Märdian: > please note that ghmm seems to FTBFS for a reason unrelated to this NMU: > > dh_install > dh_install: warning: Cannot find (any matches for) > "usr/lib/python3*/site-packages/*" (tried in ., debian/tmp) > > dh_install:

Bug#1044055: Reopen

2024-02-06 Thread Andreas Tille
Control: reopen -1 The issue is not closed by latest upload -- http://fam-tille.de

Bug#1044068: q2templates: FTBFS with pandas 2.0

2024-02-04 Thread Andreas Tille
Hi Rebecca, I've checked several Debian Med packages for your assumption that replacing pandas.util.testing might help but non of the candidates I've checked was caused by this. I'm rather seeing quite strange errors like in the case of q2templates here in Salsa CI https://salsa.debian.org/me

Bug#1044073: Sorry Re: python-altair and pandas 2.0

2024-02-04 Thread Andreas Tille
Am Sat, Feb 03, 2024 at 10:51:05PM + schrieb Rebecca N. Palmer: > > I think we should strive for latest upstream in > > general > > Agreed, assuming that doing so doesn't break things. I picked an upstream version which is compatible with pandas 2.x but does not need any not yet packaged modu

Bug#1044071: Bug#1043240: transition: pandas 1.5 -> 2.1 - please upload fixes

2024-02-03 Thread Andreas Tille
Hi again, Am Fri, Feb 02, 2024 at 09:56:14PM +0100 schrieb Andreas Tille: > Hi Rebecca, > > Am Tue, Jan 30, 2024 at 08:05:35AM + schrieb Rebecca N. Palmer: > > I intend to upload pandas 2.x to unstable soon. These packages have a patch > > in their bug - please upl

Bug#1044073: python-altair and pandas 2.0

2024-02-03 Thread Andreas Tille
Hi Rebecca, Am Sat, Feb 03, 2024 at 09:32:32PM + schrieb Rebecca N. Palmer: > Please don't skip/xfail tests - my suggestion above is an actual fix: > > https://salsa.debian.org/rnpalmer-guest/python-altair/-/tree/fix1044073?ref_type=heads > > (In a fork because, despite its description, this

Bug#1044076: influxdb-python and pandas 2.1

2024-02-03 Thread Andreas Tille
Hi Rebecca, Am Sat, Feb 03, 2024 at 12:32:07PM + schrieb Rebecca N. Palmer: > My fixes are pushed to Salsa, but they're in a fork because this isn't a > debian-science package: > https://salsa.debian.org/rnpalmer-guest/influxdb-python Argh, I missed that link inside the bug report and duplica

Bug#1044073: python-altair: FTBFS with pandas 2.0

2024-02-03 Thread Andreas Tille
Short notice while traveling. I tried @pytest.skip which failed since it seems even from altair.jupyter.jupyter_chart import ( IntervalSelection, IndexSelection, PointSelection, ) is a problem. WHen uncommenting this even more errors arrise. Sorry for my brevity Andreas. Am Fri

Bug#1044073: python-altair: FTBFS with pandas 2.0

2024-02-02 Thread Andreas Tille
Hi, I tried to upgrade python-altair in Git to the latest upstream version which should work with Pandas 2.0. Unfortunately it has a new dependency[1] which is not packaged yet. I had no luck to skip the according test which fails in build time test[2]. Kind regards Andreas. [1] https://py

Bug#1044076: influxdb-python: FTBFS with pandas 2.0

2024-02-02 Thread Andreas Tille
Hi Rebecca, I followed your hint "replacing all 3 instances of pandas.util.testing with pandas.testing" [1] but as you can see in Salsa CI there are remaining issues[2]. The Python3.12 issues should be fixed meanwhile in version 5.3.1-5. Any further hints / patches (preferably pushed to Salsa) w

Bug#1061344: User input needed: Stop supporting 32 bit architectures with emboss (Was: emboss-lib: identified for time_t transition but no ABI in shlibs)

2024-02-01 Thread Andreas Tille
Hi again, I've filed bug #1062371 RM: emboss [armel armhf i386 hppa m68k powerpc sh4] -- ROM; No support of 32 bit architectures any more Kind regards Andreas. Am Wed, Jan 31, 2024 at 07:53:26AM +0100 schrieb Andreas Tille: > Hi again, > > besides my suggested soluti

Bug#1058454: Do we really need to support 32bit in abinit and prody (maybe others)

2024-01-31 Thread Andreas Tille
Hi, in connection with the time_t transition in Debian Med we are discussing[1] whether we really need 32 bit support for some of our tools or whether we should realistically drop this support to concentrate on problems which are more relevant for our users. I wonder whether we could also conside

Bug#1061344: User input needed: Stop supporting 32 bit architectures with emboss (Was: emboss-lib: identified for time_t transition but no ABI in shlibs)

2024-01-30 Thread Andreas Tille
/ReleaseGoals/64bit-time Am Fri, Jan 26, 2024 at 10:44:09AM +0100 schrieb Andreas Tille: > Hi Charles, > > I wonder how we can properly solve this bug. In the early stage of > Emboss packaging obviously the packages > >libajax6, >libajax6-dev, >

Bug#1060965: q2cli: AttributeError: module 'bibtexparser' has no attribute 'bparser'

2024-01-30 Thread Andreas Tille
Control: tags -1 - upstream Control: tags -1 pending The issue was resolved by downgrading bibtexparser to the latest stable upstream release (the formerly uploaded beta caused the problem). Unfortunately there is a new issue in the new version of q2cli which fails to build due to test suite erro

Bug#1061931: closed by Debian FTP Masters (reply to Andreas Tille ) (Bug#1061931: fixed in biosquid 1.9g+cvs20050121-14)

2024-01-30 Thread Andreas Tille
Control: tags -1 pending Hi Steve, I reverted the change in unstable and pushed the change for experimental to Git. Do you want me to upload this change to experimental or should I keep on waiting? Sorry for the noise again Andreas. Am Tue, Jan 30, 2024 at 11:34:07AM +0100 schrieb Andreas

Bug#1061931: closed by Debian FTP Masters (reply to Andreas Tille ) (Bug#1061931: fixed in biosquid 1.9g+cvs20050121-14)

2024-01-30 Thread Andreas Tille
cking System wrote: > > This is an automatic notification regarding your Bug report > > which was filed against the src:biosquid package: > > > > #1061931: biosquid: NMU diff for 64-bit time_t transition > > > > It has been closed by Debian FTP Masters >

Bug#1044055: Reopen

2024-01-28 Thread Andreas Tille
Control: reopen -1 I wrongly assumed that this issue has vanished. Thus reopening the bug. -- http://fam-tille.de

Bug#1052826: Broken entrypoints package: actually a pybuild issue?

2024-01-28 Thread Andreas Tille
Am Sun, Jan 28, 2024 at 08:13:01PM +0100 schrieb julien.pu...@gmail.com: > > > > upstream page[1] says: > > > >   This package is in maintenance-only mode. New code should use the > >   importlib.metadata module in the Python standard library to find > > and load entry points. > > > > So it seem

Bug#1052866: python-plaster: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.11 returned exit code 13

2024-01-27 Thread Andreas Tille
Hi, I upgraded python-plaster to latest upstream - but this did not changed the test suite error. Kind regards Andreas. -- http://fam-tille.de

Bug#1052826: Broken entrypoints package: actually a pybuild issue?

2024-01-27 Thread Andreas Tille
Hi Jullien, upstream page[1] says: This package is in maintenance-only mode. New code should use the importlib.metadata module in the Python standard library to find and load entry points. So it seems we do not need adapt you patch very frequently since no changes will be to be expected (b

Bug#1042325: python-miio: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.11 returned exit code 13

2024-01-27 Thread Andreas Tille
Control: tags -1 help Hi, I upgraded python-miio in Git. Unfortunately there are some test suite errors[1] Any help would be welcome Andreas. [1] https://salsa.debian.org/python-team/packages/miio/-/jobs/5212674 -- http://fam-tille.de

Bug#1042620: New upstream version of flufl.i18n fails its test

2024-01-27 Thread Andreas Tille
Hi, I checked some random DPT packages and had a look into flufl.i18n. Unfortunately the new upstream version fails its test as you can see in Salsa CI[1]. Any help is welcome Andreas. [1] https://salsa.debian.org/python-team/packages/flufl.i18n/-/jobs/5148646 -- http://fam-tille.de

Bug#1056852: python-cassandra-driver: ftbfs with cython 3.0.x

2024-01-26 Thread Andreas Tille
Control: tags -1 help Control: tags -1 moreinfo Hi, I tried building the current status in Git and realised that the suggested patch is not sufficient. I decided to relax the versioned dependency from cython[1] which at least let the configure and build step pass. Unfortunately the cython3-lega

Bug#1061344: emboss-lib: identified for time_t transition but no ABI in shlibs

2024-01-26 Thread Andreas Tille
Hi Charles, I wonder how we can properly solve this bug. In the early stage of Emboss packaging obviously the packages libajax6, libajax6-dev, libnucleus6, libnucleus6-dev existed (thus the remaining Conflicts/Replaces on emboss-lib which can probably

Bug#1056813: Just adding a blocker for a new upload as upstream tag

2024-01-26 Thread Andreas Tille
Control: tags -1 upstream Control: forwarded -1 https://github.com/macs3-project/MACS/issues/615 This is no issue about the topic of this bug report (cython) but rather an issue opened upstream to solve the problem which prevents us uploading latest macs3. Kind regards Andreas. -- http://fam

Bug#1060965: Problem is caused by upgrade of python3-bibtexparser to 2.0.0b5 - issue filed upstream

2024-01-25 Thread Andreas Tille
Control: tags -1 upstream Control: forwarded -1 https://github.com/sciunto-org/python-bibtexparser/issues/451 It turns out that bibtexparser has changed its API. I asked for some documentation about this change to find a proper patch. -- http://fam-tille.de

Bug#1060973: Reduce severity since it is not reproducible

2024-01-24 Thread Andreas Tille
Control: severity -1 important

Bug#1027203: RFH: qiskit-terra

2024-01-22 Thread Andreas Tille
Hi, since qiskit-terra has two RC bugs (#1027203 and #1056878 in CC) and nobody who has expressed any help with this package I wonder whether we can keep this package in Debian. I had a look in later upstream versions but even in 0.13.0 there is a not yet packaged dependency retworkx[1] which see

Bug#1061233: src:nitime: fails to migrate to testing for too long: autopkgtest regression on 32 bits systems

2024-01-22 Thread Andreas Tille
Control: tags -1 upstream Control: forwarded -1 https://github.com/nipy/nitime/issues/214

Bug#1054748: [Help] Re: mlpy ftbfs with Python 3.12

2024-01-21 Thread Andreas Tille
Control: tags 1056819 pending Control: tags -1 help Hi, after applying the patch for the cython3 issue the build issues of this package are remaining. This is strange since the missing modules are provided inside the package. I wonder what trick I might need to do to convince the Python3 interp

Bug#1056841: pymatgen: ftbfs with cython 3.0.x

2024-01-19 Thread Andreas Tille
Am Fri, Jan 19, 2024 at 08:22:21PM +0100 schrieb Drew Parsons: > On 2024-01-19 18:52, Drew Parsons wrote: > > > > Hi Andreas, could you push your upstream and pristine-tar branches? > > Otherwise we can't use your 2023.12.18 branch. > > I see what you mean. The tag is there, the orig tarball can

Bug#1056841: pymatgen: ftbfs with cython 3.0.x

2024-01-16 Thread Andreas Tille
Control: tags -1 pending Hi, I've applied the patch in Git and also tried to upgrade to latest upstream since there is a chance that other Python3.12 issues might be fixed. Unfortunately the upgrade is all but straightforward and I gave up finally over the changes in the sphinx documention where

Bug#1056484: python-molotov's autopkg tests fail with Python 3.12

2024-01-15 Thread Andreas Tille
Control: tags -1 upstream Control: forwarded -1 https://github.com/tarekziade/molotov/issues/164 -- http://fam-tille.de

Bug#1057393: FTBFS: object has no attribute 'assertNotEquals'. Did you mean: 'assertNotEqual'

2024-01-15 Thread Andreas Tille
Control: tags -1 upstream Control: forwarded -1 https://github.com/Azure/azure-cli/issues/28194 Control: retitle -1 FTBFS: object has no attribute 'assertDictContainsSubset' Hi, while I was able to fix the object has no attribute 'assertNotEquals'. Did you mean: 'assertNotEqual' issue in Git I

Bug#1055847: python-sparse's autopkg tests fail with Python 3.12

2024-01-13 Thread Andreas Tille
Hi Nilesh, Am Sat, Jan 13, 2024 at 04:15:07PM +0530 schrieb Nilesh Patra: > Fixed in Git, please check. Thanks a lot. I'll wait for debci whether bug #1055847 persists. I wonder whether we could close simply #1058485 since the test is passing with current numba. Kind regards Andreas. --

Bug#1056504: python-sparse's autopkg tests fail with Python 3.12

2024-01-13 Thread Andreas Tille
Hi, thanks to Rebecca's hint I've updated python-sparse in Git to the latest upstream version. I decided to deactivate all patches. When trying to build I'm running into several errors: ModuleNotFoundError: No module named 'sparse._version' [1] This is surely due to the removal of versione

Bug#1042590: [Pending] django-session-security: FTBFS with Sphinx 7.1, docutils 0.20: error: invalid command 'build_sphinx'

2024-01-12 Thread Andreas Tille
Control: tags -1 pending Hi, I've fixed this problem in Git[1] but did not uploaded since autopkgtest is failing in Salsa CI[2]. Kind regards Andreas. [1] https://salsa.debian.org/python-team/packages/django-session-security/-/commit/af1ebc734a33cf1b629a2626bad508b833eb2706 [2] https://sa

Bug#1056423: [Help] Started to replace future but failed

2024-01-12 Thread Andreas Tille
Am Fri, Jan 12, 2024 at 11:45:02AM +0100 schrieb Alexandre Detiste: > > -class ExtensionNode(with_metaclass(ExtensionNodeMetaclass, object)): > +class ExtensionNode(metaclass=ExtensionNodeMetaclass, object_=True): > > Just simply > +class ExtensionNode(metaclass=ExtensionNodeMetaclass): > , but I

Bug#1056423: [Help] Started to replace future but failed

2024-01-12 Thread Andreas Tille
Control: tags -1 help Hi Alexandre, I started to follow your hint to replace future inside the code but I'm obviously struck as you can see in Salsa-CI[1]. Any help would be welcome (please also review my patch since I'm not sure about all changes). Kind regards Andreas. [1] https://salsa.d

Bug#1052849: [Help] Re: python-pkginfo: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.11 returned exit code 13

2024-01-12 Thread Andreas Tille
Hi Stefano, Am Thu, Jan 11, 2024 at 08:25:46PM + schrieb Stefano Rivera: > > The test is expecting the module to be installed in the test > environment. Either we could try harder to emulate that, or skip the > tests. I admit I tried to copy around the module before running the test with no

Bug#1052903: importlib-resources: FTBFS: E FileNotFoundError: [Errno 2] No such file or directory: '/<>/.pybuild/cpython3_3.11_importlib_resources/build/importlib_resources/tests/zipdata0

2024-01-11 Thread Andreas Tille
Control: tags -1 moreinfo Control: tags -1 unreproducible Control: severity -1 important Hi, I've tried to reproduce the issue but failed in my local pbuilder. May be that issue vanished somehow? Kind regards Andreas. -- http://fam-tille.de

Bug#1052849: [Help] Re: python-pkginfo: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.11 returned exit code 13

2024-01-11 Thread Andreas Tille
Control: tags -1 help Hi, I've fixed the two other bugs in python-pkginfo and upgraded to latest upstream. Unfortunately I have no clue about this issue. Any idea what might be wrong here? Kind regards Andreas. -- http://fam-tille.de

Bug#1042599: python-pkginfo: FTBFS with Sphinx 7.1, docutils 0.20: error: invalid command 'build_sphinx'

2024-01-11 Thread Andreas Tille
Control: tags -1 pending Control: block -1 by 1052849 -- http://fam-tille.de

Bug#1037852: Bug#1056886: May be new upstream version fixes this issue

2024-01-11 Thread Andreas Tille
l jue, 11 de ene de 2024, 05:33, Andreas Tille escribió: > > > Hi, > > > > I tried to check whether the new upstream version might fix gcc-13 / > > Python3.12 > > issues. I've pushed my work to Salsa but it needs new dependencies > > (at least https://g

Bug#1037852: May be new upstream version fixes this issue

2024-01-11 Thread Andreas Tille
Hi, I tried to check whether the new upstream version might fix gcc-13 / Python3.12 issues. I've pushed my work to Salsa but it needs new dependencies (at least https://github.com/emeryberger/Heap-Layers may be two more) and I gave up here since I have no specific interest in this package. Hope

Bug#1056874: [Help] Re: python-srsly: ftbfs with cython 3.0.x

2024-01-10 Thread Andreas Tille
Control: tags -1 help Hi, when applying the patch (thanks for this, Bas) I learned that the package builds for other reasons. This is also true for the latest upstream version[1]. Any help to fix this would be welcome Andreas. [1] https://salsa.debian.org/python-team/packages/python-srsly/-

Bug#1058400: [Help] Re: python-stack-data: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.12 3.11" returned exit code 13

2024-01-10 Thread Andreas Tille
Control: tags -1 help Hi, I tried the suggested patch for the cython3 issue of bug #1056872 in the currently packaged version[1] as well also tried upgrading to latest upstream and tried building[2] which failed as well. I admit, I'm running out of ideas what to do next. Any help is welcome

Bug#1012074: python-rocksdb: FTBFS with rocksdb 7.2+

2024-01-10 Thread Andreas Tille
Control: tags -1 upstream Control: forwarded -1 https://github.com/NightTsarina/python-rocksdb/issues/22 -- http://fam-tille.de

Bug#1058276: bart-view: FTBFS: (.text+0xa4e): undefined reference to `shared_obj_destroy'

2024-01-09 Thread Andreas Tille
Hi Martin, I tried to open an issue upstream but it seems the repository does not feature submitting issues. Can you have a look please? Kind regards Andreas. -- http://fam-tille.de

Bug#1058613: Source archive of DSS missing

2024-01-09 Thread Andreas Tille
03:09:29PM +0100 schrieb Andreas Tille: > Hi, > > could someone please have a look at the source download? > > Thank you >Andreas. > > Am Fri, Dec 08, 2023 at 04:04:27PM +0100 schrieb Andreas Tille: > > Hi, > > > > when looking at > > > &

Bug#1058278: Source download of DeMixT broken

2024-01-09 Thread Andreas Tille
, 2023 at 03:07:05PM +0100 schrieb Andreas Tille: > Hi again, > > could someone please have a look at the source download? > > Thank you > Andreas. > > Am Fri, Dec 08, 2023 at 04:01:17PM +0100 schrieb Andreas Tille: > > Hi, > > > > when lookin

Bug#1059385: r-cran-ggally: autopkgtest regression

2024-01-09 Thread Andreas Tille
Control: tags -1 upstream Control: forwarded -1 https://github.com/ggobi/ggally/issues/485 -- http://fam-tille.de

Bug#1060205: castxml: BD-Uninstallable: castxml build-depends on missing: libclang-17-dev:mips64el

2024-01-09 Thread Andreas Tille
Hi, Am Sun, Jan 07, 2024 at 09:05:10PM +0100 schrieb Étienne Mollier: > Thanks for the heads up, I'm afraid this is a bit out of hands > right now. According to bug entries #1059465 and #1056116, > llvm-toolchain-16 and -17 fail to build on mips64el at the > moment. Also, the llvm-toolchain-15 i

Bug#1058083: Before I try to tackle this bug - can we move the package to DPT

2024-01-08 Thread Andreas Tille
Hi Ulises, Am Sun, Jan 07, 2024 at 09:18:46AM -0300 schrieb Ulises Vitulli: > Feel free to go ahead with my blessing right away! Bug fixed in a team upload on behalf of Debian Python Team. Kind regards Andreas. -- http://fam-tille.de

Bug#1058083: yapsy: FTBFS: ModuleNotFoundError: No module named 'imp'

2024-01-08 Thread Andreas Tille
Control: tags -1 upstream Control: forwarded -1 https://github.com/tibonihoo/yapsy/issues/18 -- http://fam-tille.de

Bug#1058083: yapsy: ModuleNotFoundError: No module named 'imp'

2024-01-08 Thread Andreas Tille
Hi Thibauld, Debian has packaged yapsy. We try to migrate to Python3.12. When testing yapsy with Python3.12 in our CI[1] it fails with: testActivationAndDeactivation (test.test_SimplePlugin.SimpleTestCase.testActivationAndDeactivation) Test if the activation procedure works. ... Unable to impo

Bug#1060100: r-cran-rstanarm: FTBFS: Error: segfault from C stack overflow

2024-01-08 Thread Andreas Tille
Control: tags -1 moreinfo Control: tags -1 unreproducible Hi Sebastian, I tried to reproduce the problem in a (pbuilder) chroot locally but here all went fine. Please note that r-cran-rstanarm is a quite resource-hungry build. Could you please make sure there are sufficient resources available

Bug#1058814: flint-arb: FTBFS: /<>/fmpz_extras.h:208:1: error: static declaration of ‘fmpz_ui_pow_ui’ follows non-static declaration

2024-01-07 Thread Andreas Tille
Control: tags -1 upstream Control: forwarded -1 https://github.com/fredrik-johansson/arb/issues/454 -- http://fam-tille.de

Bug#1055550: Removal of Python3 package of redland-bindings breaks mozilla-devscripts

2024-01-05 Thread Andreas Tille
Hi Doko, thanks for working on the QA upload to fix #100 and #1056518 of redland-bindings by simply removing the Python3 support. Unfortunately it breaks mozilla-devscripts and thus it cant migrate to testing[1]. Kind regards Andreas. [1] https://qa.debian.org/excuses.php?package=redla

Bug#1058083: Before I try to tackle this bug - can we move the package to DPT

2024-01-03 Thread Andreas Tille
Ping? If I do not hear from you in the next couple of days I'll move the package to DPT at beginning of next week. Kind regards Andreas. Am Mon, Dec 25, 2023 at 08:34:58AM +0100 schrieb Andreas Tille: > Hi Agustin and Ulises, > > I noticed there were several NMUs not commi

Bug#1059650: libsbml: autopkgtest failure with Python 3.12

2023-12-29 Thread Andreas Tille
Hi Graham, Am Fri, Dec 29, 2023 at 09:12:14PM +0200 schrieb Graham Inggs: > > libsbml's autopkgtests fail with Python 3.12 [1]. I've copied what I > hope is the relevant part of the log below. If I remember correctly python3-sbml works only with one Python3 version at the same time. Thus we pr

Bug#1058083: Before I try to tackle this bug - can we move the package to DPT

2023-12-24 Thread Andreas Tille
Hi Agustin and Ulises, I noticed there were several NMUs not commited to the Git repository of this package. I'd volunteer to bring the repository in sync with latest uploads and move it to Debian Python Team before I try to tacke bug #1058083. Kind regards Andreas. -- http://fam-tille.de

Bug#1058096: Test suite issues with new version of python3-antlr4 (Was: python3-antlr4: FTBFS: AttributeError: 'TestIntervalSet' object has no attribute 'assertEquals'. Did you mean: 'assertEqual'?)

2023-12-21 Thread Andreas Tille
Control: tags -1 pending Hi, I intended to fix bug #1058096. Since I realised there is a new upstream version I was considering an upgrade which I pushed to Salsa. Unfortunately there are other test suite errors as you can see in Salsa CI[1]:

Bug#1058096: marked as pending in python3-antlr4

2023-12-21 Thread Andreas Tille
Control: tag -1 pending Hello, Bug #1058096 in python3-antlr4 reported by you has been fixed in the Git repository and is awaiting an upload. You can see the commit message below and you can check the diff of the fix at: https://salsa.debian.org/python-team/packages/python3-antlr4/-/commit/574ca

Bug#1058613: r-bioc-dss: Prevent migration to testing due to missing source

2023-12-13 Thread Andreas Tille
Source: r-bioc-dss Version: 2.48.0+dfsg-1 Severity: grave Justification: renders package unusable X-Debbugs-Cc: 1054...@bugs.debian.org As reported to upstream the source download for Bioconductor 3.18 of DSS is broken. To enable the Bioconductor 3.18 transition this package will be removed from

Bug#1058555: [Help] Missing proper Build-Depends from libreoffice (Wass: Bug#1058555: parallel: FTBFS: /usr/bin/install: cannot stat './parallel_cheat_bw.pdf': No such file or directory)

2023-12-13 Thread Andreas Tille
Control: tags -1 help Am Tue, Dec 12, 2023 at 09:52:48PM +0100 schrieb Lucas Nussbaum: > > /usr/bin/install: cannot stat './parallel_cheat_bw.pdf': No such file or > > directory This file is (re-)created via libreoffice --headless --convert-to pdf parallel_cheat_bw.fodt Formerly this worked

Bug#1058195: toil: FTBFS: ModuleNotFoundError: No module named 'imp'

2023-12-12 Thread Andreas Tille
12, 2023 at 06:17:19PM +0100 schrieb Andreas Tille: > Control: tags -1 pending > Control: block -1 by 1058237 > > A fix was pushed to Git, but the test suite fails due to > bug #1058237 in python3-boto. -- http://fam-tille.de

Bug#1058237: python-boto: FTBFS: ModuleNotFoundError: No module named 'imp'

2023-12-12 Thread Andreas Tille
Hi again, maybe we need to remove python-boto and fix all its rdepends. According to upstream[1]: This repo, boto was deprecated in 2020 and the last supported Python 3 version was 3.4. It's unlikely this package will ever work with Python 3.12. The current AWS SDK for Python, boto3, can

Bug#1058237: python-boto: FTBFS: ModuleNotFoundError: No module named 'imp'

2023-12-12 Thread Andreas Tille
Control: forwarded -1 https://github.com/boto/boto/issues/3951 -- http://fam-tille.de

Bug#1058195: toil: FTBFS: ModuleNotFoundError: No module named 'imp'

2023-12-12 Thread Andreas Tille
Control: tags -1 pending Control: block -1 by 1058237 A fix was pushed to Git, but the test suite fails due to bug #1058237 in python3-boto. -- http://fam-tille.de

Bug#1057354: src:r-cran-dbplyr: fails to migrate to testing for too long: triggers autopkgtest regression

2023-12-12 Thread Andreas Tille
Hi Paul, is my assumption that this issue will be fixed once the r-bioc-api-3.18 transition is finished is done as well? Kind regards Andreas. -- http://fam-tille.de

Bug#1042244: Bug#1056419: [Help] Re: python-future: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.11 returned exit code 13

2023-12-11 Thread Andreas Tille
Hi Alexandre, Am Mon, Dec 11, 2023 at 09:18:16PM +0100 schrieb Alexandre Detiste: > > https://github.com/lebigot/uncertainties/releases/tag/3.1.7 > > +1 OK. > > Also we should probably get rid of python-future at some point. > > I removed it from three games this week-end > and filled 6 more

Bug#1042244: [Help] Re: python-future: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.11 returned exit code 13

2023-12-11 Thread Andreas Tille
Control: tags -1 help [Bug #1056419 in CC since the issue seems to be caused by python-future] Hi Vincent, I tried to upgrade python-future to the latest upstream version in the hope that this would solve the issue reported in bug #1042244. Unfortunately this is not the case and now with Python3

Bug#1056493: python-pulp's autopkg tests fail with Python 3.12

2023-12-11 Thread Andreas Tille
Control: tags -1 upstream Control: forwarded -1 https://github.com/coin-or/pulp/issues/709 -- http://fam-tille.de

Bug#1055692: Fix blocked by 1057762: cython: Move cython 3.0 from experimental to unstable

2023-12-09 Thread Andreas Tille
Control: block -1 by 1057762 -- http://fam-tille.de

Bug#1057809: Fix forward address

2023-12-09 Thread Andreas Tille
Control: forwarded -1 https://github.com/pysam-developers/pysam/issues/1253 -- http://fam-tille.de

Bug#1057171: libitext5-java: FTBFS with bouncycastle 1.77

2023-12-09 Thread Andreas Tille
Hi, I tried the latest upstream version of libitext5-java and commited the change to Git. Unfortunately the problem persists. Some Debian Med packages are depending from this package so I'd be happy if someone could have a look. You can find the latest log in Salsa CI[1]. Kind regards Andre

Bug#1057809: python-pysam ftbfs with Python 3.12

2023-12-08 Thread Andreas Tille
Control: tags -1 upstream Control: forwarded -1 https://github.com/biopython/biopython/issues/4532 -- http://fam-tille.de

Bug#1057203: r-bioc-rhdf5filters: missing build-dependency on big-endian architectures

2023-12-03 Thread Andreas Tille
Hi Graham, Am Sun, Dec 03, 2023 at 08:56:09AM -0100 schrieb Graham Inggs: > > Yet it seems 1.12.1+dfsg2-1 was uploaded with vbz compression still enabled: > >[ Nilesh Patra ] >* Enable VBZ compression as well > > Perhaps the fastest solution here is to revert enabling vbz support in > r

Bug#1057203: r-bioc-rhdf5filters: missing build-dependency on big-endian architectures

2023-12-02 Thread Andreas Tille
Hi Graham, thanks for bringing this up. I have a totally different question concerning the transition. At https://buildd.debian.org/status/package.php?p=r-bioc-ioniser the build logs are lagging now nearly two days for all architectures. Do you know whom to ask for the reason? Kind regard

Bug#1057296: src:r-cran-data.table: fails to migrate to testing for too long: autopkgtest failure on 32 bits

2023-12-02 Thread Andreas Tille
Control: tags -1 upstream Control: forwarded -1 https://github.com/Rdatatable/data.table/issues/5785 Control: reopen -1 Forwarded upstream Reopening to stay visible in our sentinel -- http://fam-tille.de

Bug#1056497: src:r-bioc-rhdf5filters: fails to migrate to testing for too long: Build-Depends not available on s390x

2023-11-22 Thread Andreas Tille
Hi Paul, Am Wed, Nov 22, 2023 at 03:45:49PM +0100 schrieb Paul Gevers: > Source: r-bioc-rhdf5filters > Version: 1.12.1+dfsg-2 > Severity: serious > Control: close -1 1.12.1+dfsg2-1 > Tags: sid trixie > User: release.debian@packages.debian.org > Usertags: out-of-sync Thank you for the bug repo

Bug#1055922: rmatrix: ABI change in Matrix 1.6-2

2023-11-21 Thread Andreas Tille
Hi Graham, Am Tue, Nov 21, 2023 at 06:20:01PM -0100 schrieb Graham Inggs: > I think this means at least r-cran-seuratobject (not r-cran-seurat > itself) is also in need of your fix [1], if only to silence that > warning. Would you please take care of that? Done. Thanks for checking Andreas.

Bug#1050854: xarray test failure on amd64

2023-11-20 Thread Andreas Tille
Hi Rebecca, Am Sun, Nov 19, 2023 at 09:58:26PM + schrieb Rebecca N. Palmer: > This bug is now a crash (not the original error message): > https://ci.debian.net/data/autopkgtest/testing/amd64/p/python-xarray/39962554/log.gz > I don't know whether the same patch still works. > > The Salsa repos

Bug#1055922: rmatrix: ABI change in Matrix 1.6-2

2023-11-20 Thread Andreas Tille
Hi Graham, Am Mon, Nov 20, 2023 at 12:21:39PM -0100 schrieb Graham Inggs: > For the r-cran-tmb upload, I now see only autopkgtest regressions [1] for: > r-cran-insight/0.19.6+dfsg-1 > r-cran-parameters/0.21.2-1 > I have not investigated, but these seem to be passing in unstable, so > can be hinted

<    1   2   3   4   5   6   7   8   9   10   >