Your message dated Thu, 05 Sep 2013 03:33:20 +0000
with message-id <e1vhqjs-000493...@franck.debian.org>
and subject line Bug#721770: fixed in mothur 1.31.2+dfsg-2
has caused the Debian Bug report #721770,
regarding mothur: FTBFS on ia64: unrecognized command line option '-m64'
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
721770: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=721770
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: mothur
Version: 1.31.2+dfsg-1
Severity: serious
Justification: fails to build from source
The ia64 build of mothur failed because GCC doesn't recognize -m64 there:
if [ 64 -eq 64 ] ; then \
dh_auto_build -- 64BIT_VERSION=yes USEMPI=yes && \
mv mothur mothur-mpi && make clean && \
dh_auto_build -- 64BIT_VERSION=yes USEMPI=no ; \
else \
dh_auto_build -- 64BIT_VERSION=no ; \
fi
make[2]: Entering directory `/«BUILDDIR»/mothur-1.31.2+dfsg'
gfortran -c -m64 *.f
f951: error: unrecognized command line option '-m64'
I'd suggest doing away with that flag altogether, since it's redundant
on the architectures that do support it (disregarding multiarch
compiler installations, on which mothur of course doesn't build-depend).
Could you please look into it?
Thanks!
--- End Message ---
--- Begin Message ---
Source: mothur
Source-Version: 1.31.2+dfsg-2
We believe that the bug you reported is fixed in the latest version of
mothur, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 721...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Aaron M. Ucko <u...@debian.org> (supplier of updated mothur package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Wed, 04 Sep 2013 22:37:31 -0400
Source: mothur
Binary: mothur mothur-mpi
Architecture: source amd64
Version: 1.31.2+dfsg-2
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Aaron M. Ucko <u...@debian.org>
Description:
mothur - sequence analysis suite for research on microbiota
mothur-mpi - mpi-enabled binary for mothur
Closes: 721770
Changes:
mothur (1.31.2+dfsg-2) unstable; urgency=low
.
* Team upload.
* debian/patches/makefile.patch: Leave off -m64, which ia64 doesn't
support and other 64-bit architectures don't need. (Closes: #721770.)
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mothur_1.31.2+dfsg-2.debian.tar.gz
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Files:
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