Your message dated Thu, 25 Aug 2016 05:33:59 +0000
with message-id <e1bcnid-0005e9...@franck.debian.org>
and subject line Bug#831121: fixed in shark 3.1.1+ds1-1
has caused the Debian Bug report #831121,
regarding shark: FTBFS with GCC 6: HDF5Tests.cpp:39:56: error: ambiguous
overload for 'operator=' (operand types are 'std::vector<int>' and
'boost::assign_detail::generic_list<double>')
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
831121: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=831121
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: shark
Version: 3.1.0+ds1-1
Severity: serious
Tags: stretch sid
User: debian...@lists.debian.org
Usertags: qa-ftbfs-20160713 qa-ftbfs
Justification: FTBFS with GCC 6 on amd64
Hi,
During a rebuild of all packages in sid using the gcc-defaults package
available in experimental to make GCC default to version 6, your package failed
to build on amd64. For more information about GCC 6 and Stretch, see:
- https://wiki.debian.org/GCC6
- https://lists.debian.org/debian-devel-announce/2016/06/msg00007.html
Relevant part (hopefully):
> make[3]: Entering directory '/«BUILDDIR»/shark-3.1.0+ds1/obj-x86_64-linux-gnu'
> [ 22%] Building CXX object Test/CMakeFiles/Data_HDF5.dir/Data/HDF5Tests.cpp.o
> cd /«BUILDDIR»/shark-3.1.0+ds1/obj-x86_64-linux-gnu/Test && /usr/bin/c++
> -DBOOST_ALL_DYN_LINK -DBOOST_FILESYSTEM_VERSION=3
> -DBOOST_PARAMETER_MAX_ARITY=15 -DBOOST_TEST_DYN_LINK
> -I/usr/include/hdf5/serial -I/«BUILDDIR»/shark-3.1.0+ds1/include
> -I/«BUILDDIR»/shark-3.1.0+ds1/obj-x86_64-linux-gnu/include -g -O2 -fPIE
> -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic
> -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -o
> CMakeFiles/Data_HDF5.dir/Data/HDF5Tests.cpp.o -c
> /«BUILDDIR»/shark-3.1.0+ds1/Test/Data/HDF5Tests.cpp
> In file included from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Rng/Cauchy.h:35:0,
> from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Rng/GlobalRng.h:88,
> from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Core/utility/functional.h:41,
> from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Data/Dataset.h:54,
> from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Data/HDF5.h:46,
> from /«BUILDDIR»/shark-3.1.0+ds1/Test/Data/HDF5Tests.cpp:3:
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Core/Math.h:138:3: warning: extra
> ';' [-Wpedantic]
> };
> ^
> In file included from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Core/utility/functional.h:41:0,
> from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Data/Dataset.h:54,
> from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Data/HDF5.h:46,
> from /«BUILDDIR»/shark-3.1.0+ds1/Test/Data/HDF5Tests.cpp:3:
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Rng/GlobalRng.h:211:52: warning:
> extra ';' [-Wpedantic]
> ANNOUNCE_SHARK_RNG( shark::FastRngType, FastRng );
> ^
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Rng/GlobalRng.h:212:51: warning:
> extra ';' [-Wpedantic]
> ANNOUNCE_SHARK_RNG( shark::DefaultRngType, Rng );
> ^
> In file included from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Data/BatchInterface.h:35:0,
> from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Data/Impl/Dataset.inl:31,
> from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Data/Dataset.h:56,
> from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Data/HDF5.h:46,
> from /«BUILDDIR»/shark-3.1.0+ds1/Test/Data/HDF5Tests.cpp:3:
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/LinAlg/Base.h:125:52: warning:
> extra ';' [-Wpedantic]
> SHARK_VECTOR_MATRIX_TYPEDEFS(long double, BigReal);
> ^
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/LinAlg/Base.h:131:49: warning:
> extra ';' [-Wpedantic]
> SHARK_VECTOR_MATRIX_TYPEDEFS(bool, Bool);
> ^
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/LinAlg/Base.h:152:40: warning:
> extra ';' [-Wpedantic]
> SHARK_VECTOR_MATRIX_ASSIGNMENT(BigReal);
> ^
> In file included from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Data/Impl/Dataset.inl:32:0,
> from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Data/Dataset.h:56,
> from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Data/HDF5.h:46,
> from /«BUILDDIR»/shark-3.1.0+ds1/Test/Data/HDF5Tests.cpp:3:
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Core/ISerializable.h:129:36:
> warning: extra ';' [-Wpedantic]
> BOOST_SERIALIZATION_SPLIT_MEMBER();
> ^
> /«BUILDDIR»/shark-3.1.0+ds1/Test/Data/HDF5Tests.cpp: In constructor
> 'shark::HDF5Fixture::HDF5Fixture()':
> /«BUILDDIR»/shark-3.1.0+ds1/Test/Data/HDF5Tests.cpp:39:56: error: ambiguous
> overload for 'operator=' (operand types are 'std::vector<int>' and
> 'boost::assign_detail::generic_list<double>')
> m_expectedFromLabel1 = list_of(80.0)(81.0)(82.0)(83.0);
> ^
> In file included from /usr/include/c++/6/vector:69:0,
> from /usr/include/boost/format.hpp:17,
> from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Core/utility/ScopedHandle.h:47,
> from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Data/HDF5.h:45,
> from /«BUILDDIR»/shark-3.1.0+ds1/Test/Data/HDF5Tests.cpp:3:
> /usr/include/c++/6/bits/vector.tcc:167:5: note: candidate: std::vector<_Tp,
> _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&)
> [with _Tp = int; _Alloc = std::allocator<int>]
> vector<_Tp, _Alloc>::
> ^~~~~~~~~~~~~~~~~~~
> In file included from /usr/include/c++/6/vector:64:0,
> from /usr/include/boost/format.hpp:17,
> from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Core/utility/ScopedHandle.h:47,
> from
> /«BUILDDIR»/shark-3.1.0+ds1/include/shark/Data/HDF5.h:45,
> from /«BUILDDIR»/shark-3.1.0+ds1/Test/Data/HDF5Tests.cpp:3:
> /usr/include/c++/6/bits/stl_vector.h:450:7: note: candidate: std::vector<_Tp,
> _Alloc>& std::vector<_Tp, _Alloc>::operator=(std::vector<_Tp, _Alloc>&&)
> [with _Tp = int; _Alloc = std::allocator<int>]
> operator=(vector&& __x) noexcept(_Alloc_traits::_S_nothrow_move())
> ^~~~~~~~
> /usr/include/c++/6/bits/stl_vector.h:471:7: note: candidate: std::vector<_Tp,
> _Alloc>& std::vector<_Tp, _Alloc>::operator=(std::initializer_list<_Tp>)
> [with _Tp = int; _Alloc = std::allocator<int>]
> operator=(initializer_list<value_type> __l)
> ^~~~~~~~
> make[3]: *** [Test/CMakeFiles/Data_HDF5.dir/Data/HDF5Tests.cpp.o] Error 1
The full build log is available from:
http://people.debian.org/~lucas/logs/2016/07/13/shark_3.1.0+ds1-1_unstable_gcc6.log
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.
--- End Message ---
--- Begin Message ---
Source: shark
Source-Version: 3.1.1+ds1-1
We believe that the bug you reported is fixed in the latest version of
shark, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 831...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Ghislain Antony Vaillant <ghisv...@gmail.com> (supplier of updated shark
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sun, 21 Aug 2016 17:37:51 +0100
Source: shark
Binary: libshark0 libshark-dev shark-doc
Architecture: source
Version: 3.1.1+ds1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<debian-science-maintain...@lists.alioth.debian.org>
Changed-By: Ghislain Antony Vaillant <ghisv...@gmail.com>
Description:
libshark-dev - development files for Shark
libshark0 - Shark machine learning library
shark-doc - documentation and examples for Shark
Closes: 820701 831121
Changes:
shark (3.1.1+ds1-1) unstable; urgency=medium
.
* New upstream release.
* Bump standards version to 3.9.8, no changes required.
* Cherry-pick patch series fixing FTBFS on Stretch. (Closes: #831121)
* Cherry-pick patch series fixing FTBFS of the testsuite. (Closes: #820701)
* Remove test target override, no longer necessary.
* Drop debug package in favor of autogenerated dbgsym.
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Files:
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