Source: libbio-graphics-perl Version: 2.39-5 Severity: serious Justification: fails to build from source User: reproducible-bui...@lists.alioth.debian.org Usertags: ftbfs X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org
Dear Maintainer, libbio-graphics-perl fails to build from source in unstable/amd64: […] dh build dh_testdir dh_update_autotools_config dh_auto_configure perl -I. Build.PL --installdirs vendor --config "optimize=-g -O2 -fdebug-prefix-map=«BUILDDIR»=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" --config "ld=x86_64-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/home/lamby/temp/cdt.20161214084524.WfwH8dO4Qj.db.libbio-graphics-perl/libbio-graphics-perl-2.39=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro" Created MYMETA.yml and MYMETA.json Creating new 'Build' script for 'Bio-Graphics' version '2.39' dh_auto_build perl Build Building Bio-Graphics dh_auto_test perl Build test --verbose 1 ------------- EXCEPTION: Bio::Root::Exception ------------- MSG: The requested glyph class, ``arrow'' is not available: Can't locate Bio/Coordinate/Pair.pm in @INC (you may need to install the Bio::Coordinate::Pair module) (@INC contains: . «BUILDDIR»/t/../lib /home/lamby/temp/cdt.20161214084524.WfwH8dO4Qj.db.libbio-graphics-perl/libbio-graphics-perl-2.39/blib/lib /home/lamby/temp/cdt.20161214084524.WfwH8dO4Qj.db.libbio-graphics-perl/libbio-graphics-perl-2.39/blib/arch /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.24.1 /usr/local/share/perl/5.24.1 /usr/lib/x86_64-linux-gnu/perl5/5.24 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.24 /usr/share/perl/5.24 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base) at /home/lamby/temp/cdt.20161214084524.WfwH8dO4Qj.db.libbio-graphics-perl/libbio-graphics-perl-2.39/t/../lib/Bio/Graphics/Glyph/arrow.pm line 13. BEGIN failed--compilation aborted at «BUILDDIR»/t/../lib/Bio/Graphics/Glyph/arrow.pm line 13. Compilation failed in require at (eval 43) line 2. STACK: Error::throw STACK: Bio::Root::Root::throw /usr/share/perl5/Bio/Root/Root.pm:447 STACK: Bio::Graphics::Glyph::Factory::make_glyph «BUILDDIR»/t/../lib/Bio/Graphics/Glyph/Factory.pm:342 STACK: Bio::Graphics::Glyph::make_subglyph «BUILDDIR»/t/../lib/Bio/Graphics/Glyph.pm:310 STACK: Bio::Graphics::Glyph::new «BUILDDIR»/t/../lib/Bio/Graphics/Glyph.pm:270 STACK: Bio::Graphics::Glyph::Factory::make_glyph «BUILDDIR»/t/../lib/Bio/Graphics/Glyph/Factory.pm:346 STACK: Bio::Graphics::Panel::_add_track «BUILDDIR»/t/../lib/Bio/Graphics/Panel.pm:414 STACK: Bio::Graphics::Panel::_do_add_track «BUILDDIR»/t/../lib/Bio/Graphics/Panel.pm:386 STACK: Bio::Graphics::Panel::add_track «BUILDDIR»/t/../lib/Bio/Graphics/Panel.pm:312 STACK: Bio::Graphics::FeatureFile::render «BUILDDIR»/t/../lib/Bio/Graphics/FeatureFile.pm:675 STACK: t/BioGraphics.t:53 ----------------------------------------------------------- # Looks like you planned 49 tests but ran 4. # Looks like your test exited with 2 just after 4. t/BioGraphics.t .. 1..49 ok 1 - use GD::Image; ok 2 - use Bio::Graphics::FeatureFile; ok 3 - use Bio::Graphics::Panel; ok 4 Dubious, test returned 2 (wstat 512, 0x200) Failed 45/49 subtests t/Wiggle.t ....... 1..11 ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 ok 7 ok 8 ok 9 ok 10 ok 11 ok Test Summary Report ------------------- t/BioGraphics.t (Wstat: 512 Tests: 4 Failed: 0) Non-zero exit status: 2 Parse errors: Bad plan. You planned 49 tests but ran 4. Files=2, Tests=15, 1 wallclock secs ( 0.03 usr 0.00 sys + 0.50 cusr 0.04 csys = 0.57 CPU) Result: FAIL Failed 1/2 test programs. 0/15 subtests failed. dh_auto_test: perl Build test --verbose 1 returned exit code 255 debian/rules:4: recipe for target 'build' failed make: *** [build] Error 2 dpkg-buildpackage: error: debian/rules build gave error exit status 2 […] The full build log is attached. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `-
libbio-graphics-perl.2.39-5.unstable.amd64.log.txt.gz
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