Accepted circlator 1.4.1-1 (source) into unstable

2017-01-24 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: circlator - circularize genome assemblies Changes: circlator (1.4.1-1) unstable; urgency=medium . * Team upload. * New upstream release. Checksums-Sha1: cf87c799666778e7fa6a1bb54c298c908a4d4c60 2173 circlator

Accepted stenographer 0.0~git20161206.0.66a8e7e-4 (source) into unstable

2017-01-23 Thread Sascha Steinbiss
Bengen <ben...@debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: stenographer - full-packet-capture utility -- server stenographer-client - full-packet-capture utility -- clients stenographer-common - full-packet-capture utility -- common files Closes: 85

Accepted stenographer 0.0~git20161206.0.66a8e7e-3 (source all amd64) into unstable

2017-01-22 Thread Sascha Steinbiss
: Hilko Bengen <ben...@debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: stenographer - full-packet-capture utility -- server stenographer-client - full-packet-capture utility -- clients stenographer-common - full-packet-capture utility -- common f

Accepted lambda-align 1.0.1-2 (source amd64) into unstable

2017-01-21 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: lambda-align - Local Aligner for Massive Biological DatA Changes: lambda-align (1.0.1-2) unstable; urgency=medium . * Set SeqAn_DIR to make sure SeqAn modules are found. This fixes FTBFS against libseqa

Accepted stenographer 0.0~git20161206.0.66a8e7e-2 (source all amd64) into unstable

2017-01-20 Thread Sascha Steinbiss
: Hilko Bengen <ben...@debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: stenographer - full-packet-capture utility -- server stenographer-client - full-packet-capture utility -- clients stenographer-common - full-packet-capture utility -- common f

Accepted stenographer 0.0~git20161206.0.66a8e7e-1 (source all amd64) into unstable, unstable

2017-01-20 Thread Sascha Steinbiss
: Hilko Bengen <ben...@debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: stenographer - full-packet-capture utility -- server stenographer-client - full-packet-capture utility -- clients stenographer-common - full-packet-capture utility -- common files Closes: 79

Accepted ariba 2.7.0+ds-1 (source amd64) into unstable

2017-01-17 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: ariba - Antibiotic Resistance Identification By Assembly Changes: ariba (2.7.0+ds-1) unstable; urgency=medium . * New upstream release. * Add new dep on python3-bs4 (BeautifulSoup4). Ch

Accepted khmer 2.0+dfsg-8 (source) into unstable

2017-01-15 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: khmer - in-memory DNA sequence kmer counting, filtering & graph traversal khmer-common - common files for the khmer project tools liboxli-dev - in-memory DNA sequence analysis dev l

Accepted hhsuite 3.0~beta2+dfsg-1 (source all amd64) into unstable

2017-01-15 Thread Sascha Steinbiss
Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: hhsuite- sensitive protein sequence searching based on HMM-HMM alignment hhsuite-data - sensitive protein sequence searching based on HMM-HMM alignment ( hhsuite-dbg

Accepted python-pbcommand 0.5.3-1 (source all) into unstable

2017-01-15 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: python-pbcommand - common command-line interface for Pacific Biosciences analysis mo Changes: python-pbcommand (0.5.3-1) unstable; urgency=medium . * Team upload. * New upstream release. Ch

Accepted libzstd 1.1.2-1 (source amd64) into unstable

2017-01-15 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: libzstd-dev - fast lossless compression algorithm -- development files libzstd1 - fast lossless compression algorithm zstd - fast lossless compression algorithm -- CLI tool Changes: libzstd (1.1.2

Accepted njplot 2.4-7 (source amd64) into unstable

2017-01-14 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: njplot - phylogenetic tree drawing program Changes: njplot (2.4-7) unstable; urgency=medium . * Team upload. . [ Andreas Tille and Sascha Steinbiss ] * Add xauth to autopkgtest dependencies * Use GLX extens

Accepted cwltool 1.0.20170114120503-1 (source all) into unstable

2017-01-14 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: cwltool- Common workflow language reference implementation Changes: cwltool (1.0.20170114120503-1) unstable; urgency=medium . * Team upload. * New upstream release. * Add cwltool as an

Accepted embassy-phylip 3.69.660-1 (source amd64) into unstable

2017-01-14 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: embassy-phylip - EMBOSS conversions of the programs in the phylip package Changes: embassy-phylip (3.69.660-1) unstable; urgency=medium . * Team upload. * New upstream release. * Use current build

Accepted bowtie2 2.3.0-1 (source amd64 all) into unstable

2017-01-14 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: bowtie2- ultrafast memory-efficient short read aligner bowtie2-examples - Examples for bowtie2 Changes: bowtie2 (2.3.0-1) unstable; urgency=medium . * Team upload. . [ Andreas Tille ] *

Accepted tifffile 20151006-1 (source amd64) into unstable

2017-01-14 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: python-tifffile - Read and write image data from and to TIFF files Changes: tifffile (20151006-1) unstable; urgency=medium . * Team upload. * New upstream version. * Enable full hardening. * Bu

Accepted igv 2.3.90+dfsg-1 (source all) into unstable

2017-01-14 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: igv- Integrative Genomics Viewer Changes: igv (2.3.90+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version. Checksums-Sha1: ebc3882963659214ccd0bdd026764be958036760 2599 igv_2.3.9

Accepted swarm-cluster 2.1.10+dfsg-1 (source amd64) into unstable

2017-01-13 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: swarm - robust and fast clustering method for amplicon-based studies Changes: swarm-cluster (2.1.10+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream release. * Remove PDF wi

Accepted openslide-python 1.1.1-1 (source amd64 all) into unstable

2017-01-13 Thread Sascha Steinbiss
Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: python-openslide - Python 2 wrapper for reading whole slide image files python-openslide-examples - Python examples for python-openslide and python3-opensl

Accepted datatables.js 1.10.13+dfsg-2 (source all) into unstable

2017-01-13 Thread Sascha Steinbiss
pkg-javascript-de...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: libjs-jquery-datatables - jQuery plug-in that makes nice tables from different data sources Closes: 850879 Changes: datatables.js (1.10.13+dfsg-2) unstable; urgency=medium . * Avoid u

Accepted iva 1.0.8+ds-1 (source amd64) into unstable

2017-01-12 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: iva- iterative virus sequence assembler Changes: iva (1.0.8+ds-1) unstable; urgency=medium . * New upstream release. * Drop patches applied by upstream. Checksums-Sha1: 6640171f8bc05c79d67607cf2778aec226a9cbd0 22

Accepted golang-github-golang-leveldb 0.0~git20161231.0.3435554-1 (source all) into unstable, unstable

2017-01-11 Thread Sascha Steinbiss
<pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-golang-leveldb-dev - Implementation of the LevelDB key/value database in Go Closes: 799472 Changes: golang-github-golang-leveldb (0.0~git20161231.0.3435554-1) unstab

Accepted lambda-align 1.0.1-1 (source amd64) into unstable

2017-01-10 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: lambda-align - Local Aligner for Massive Biological DatA Changes: lambda-align (1.0.1-1) unstable; urgency=medium . * New upstream release. * Drop patches applied by upstream. * Set CMAKE_BUILD_

Accepted genometools 1.5.9+ds-4 (source all amd64) into unstable

2017-01-06 Thread Sascha Steinbiss
Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for

Accepted rekall 1.6.0+dfsg-1 (source all) into unstable, unstable

2016-12-23 Thread Sascha Steinbiss
-de...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: python-rekall-core - memory analysis and incident response framework -- core Python mo rekall-core - memory analysis and incident response framework Closes: 838839 Changes: rekall (1.6.0+dfsg-1) unstable;

Accepted ariba 2.6.1+ds-1 (source amd64) into unstable

2016-12-21 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: ariba - Antibiotic Resistance Identification By Assembly Changes: ariba (2.6.1+ds-1) unstable; urgency=medium . * New upstream release. Checksums-Sha1: 2b73c1d74452dbb88f946763128cb17f1983358b 2209 ariba_2.

Accepted ariba 2.6.0+ds-1 (source amd64) into unstable

2016-12-21 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: ariba - Antibiotic Resistance Identification By Assembly Changes: ariba (2.6.0+ds-1) unstable; urgency=medium . * New upstream release. * Adjust dependency versions in d/control. Ch

Accepted dialign-t 1.0.2-9 (source all amd64) into unstable

2016-12-17 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: dialign-tx - Segment-based multiple sequence alignment dialign-tx-data - Segment-based multiple sequence alignment (data files) Closes: 848330 Changes: dialign-t (1.0.2-9) unstable; urgency=medium

Accepted fsa 1.15.9+dfsg-3 (source amd64) into unstable

2016-12-16 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: fsa- Fast Statistical Alignment of protein, RNA or DNA sequences Closes: 848328 Changes: fsa (1.15.9+dfsg-3) unstable; urgency=medium . * Team upload. * Add autopkgtests. Closes: #848328 Ch

Accepted python-filelock 2.0.7-1 (source all) into unstable, unstable

2016-12-15 Thread Sascha Steinbiss
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 14 Dec 2016 20:42:19 + Source: python-filelock Binary: python-filelock python3-filelock Architecture: source all Version: 2.0.7-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.

Accepted forensic-artifacts 20161022-1 (source all) into unstable, unstable

2016-12-14 Thread Sascha Steinbiss
Steinbiss <sa...@debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: forensic-artifacts - knowledge base of forensic artifacts (data files) python-artifacts - knowledge base of forensic artifacts (Python 2) python3-artifacts - knowledge base of forensic artifacts (Pyth

Bug#848175: ITP: python-filelock -- platform independent file locking module

2016-12-14 Thread Sascha Steinbiss
Package: wnpp Severity: wishlist Owner: Sascha Steinbiss <sa...@debian.org> * Package name: python-filelock Version : 2.0.7 Upstream Author : Benedikt Schmitt <bened...@benediktschmitt.de> * URL : https://github.com/benediktschmitt/py-filelo

Accepted python-pretty-yaml 16.12.2-1 (source all) into unstable

2016-12-14 Thread Sascha Steinbiss
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 14 Dec 2016 15:07:30 +0100 Source: python-pretty-yaml Binary: python-pretty-yaml python3-pretty-yaml Architecture: source all Version: 16.12.2-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <

Bug#848048: ITP: forensic-artifacts -- free, community-sourced, machine-readable knowledge base of forensic artifacts

2016-12-13 Thread Sascha Steinbiss
Package: wnpp Severity: wishlist Owner: Sascha Steinbiss <sa...@debian.org> * Package name: forensic-artifacts Version : 20161022 Upstream Author : The ForensicArtifacts.com Artifact Repository project <forensicartifa...@googlegroups.com> * URL : https:

Accepted augustus 3.2.3+dfsg-1 (source all amd64) into unstable

2016-12-11 Thread Sascha Steinbiss
ian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: augustus - gene prediction in eukaryotic genomes augustus-data - data files for AUGUSTUS augustus-doc - documentation files for AUGUSTUS Changes: augustus (3.2.3+dfsg-1) unsta

Accepted python-pretty-yaml 16.12.1-1 (source all) into unstable

2016-12-10 Thread Sascha Steinbiss
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sat, 10 Dec 2016 08:51:32 + Source: python-pretty-yaml Binary: python-pretty-yaml python3-pretty-yaml Architecture: source all Version: 16.12.1-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <

Accepted datatables.js 1.10.13+dfsg-1 (source all) into unstable

2016-12-09 Thread Sascha Steinbiss
pkg-javascript-de...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: libjs-jquery-datatables - jQuery plug-in that makes nice tables from different data sources Changes: datatables.js (1.10.13+dfsg-1) unstable; urgency=medium . * New upstream release.

Accepted fastqc 0.11.5+dfsg-6 (source all) into unstable

2016-12-08 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: fastqc - quality control for high throughput sequence data Closes: 846708 Changes: fastqc (0.11.5+dfsg-6) unstable; urgency=medium . * Team upload. * Avoid use of SAMFileReader to fix FTBFS. Closes: #846

Accepted artemis 16.0.17+dfsg-1 (source all) into unstable

2016-12-08 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: artemis- genome browser and annotation tool Closes: 846671 Changes: artemis (16.0.17+dfsg-1) unstable; urgency=medium . [ Sascha Steinbiss ] * Team upload. * New upstream release. * Refresh patches.

Accepted spades 3.9.1+dfsg-1 (source amd64) into unstable

2016-12-06 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: spades - genome assembler for single-cell and isolates data sets Changes: spades (3.9.1+dfsg-1) unstable; urgency=medium . * New upstream release. Checksums-Sha1: 2df4283635645d80217d734a9db92cdd2a1541f5 2262

Accepted ariba 2.5.1+ds-1 (source amd64) into unstable

2016-12-05 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: ariba - Antibiotic Resistance Identification By Assembly Changes: ariba (2.5.1+ds-1) unstable; urgency=medium . * New upstream release. Checksums-Sha1: df69255db88e1832f6f7251c323bc096107e3e0e 2209 ariba_2.

Accepted python-portpicker 1.1.1-1 (source all) into unstable, unstable

2016-12-02 Thread Sascha Steinbiss
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 23 Nov 2016 16:00:57 +0100 Source: python-portpicker Binary: python-portpicker python3-portpicker Architecture: source all Version: 1.1.1-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.

Accepted python-codegen 1.0-1 (source all) into unstable, unstable

2016-12-02 Thread Sascha Steinbiss
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 23 Nov 2016 16:00:57 +0100 Source: python-codegen Binary: python-codegen Architecture: source all Version: 1.0-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.org> Changed-By:

Accepted python-flask-sockets 0.2.1-1 (source all) into unstable, unstable

2016-12-02 Thread Sascha Steinbiss
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Fri, 02 Dec 2016 12:30:37 +0100 Source: python-flask-sockets Binary: python-flask-sockets Architecture: source all Version: 0.2.1-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.org> C

Accepted python-pretty-yaml 16.11.4-1 (source all) into unstable, unstable

2016-12-02 Thread Sascha Steinbiss
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Fri, 02 Dec 2016 15:02:11 +0100 Source: python-pretty-yaml Binary: python-pretty-yaml python3-pretty-yaml Architecture: source all Version: 16.11.4-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <

Bug#846584: ITP: python-flask-sockets -- elegant WebSockets for your Flask apps

2016-12-02 Thread Sascha Steinbiss
Package: wnpp Severity: wishlist Owner: Sascha Steinbiss <sa...@debian.org> * Package name: python-flask-sockets Version : 0.2.1 Upstream Author : Kenneth Reitz * URL : https://github.com/kennethreitz/flask-sockets * License : MIT Programming Lang:

Bug#846582: ITP: python-codegen -- extension to ast that allows AST -> Python code generation

2016-12-02 Thread Sascha Steinbiss
Package: wnpp Severity: wishlist Owner: Sascha Steinbiss <sa...@debian.org> * Package name: python-codegen Version : 1.0 Upstream Author : Armin Ronacher * URL : https://github.com/andreif/codegen * License : BSD Programming Lang: Python Descr

Bug#846577: ITP: python-portpicker -- Python module to find unused network ports to bind to

2016-12-02 Thread Sascha Steinbiss
Package: wnpp Severity: wishlist Owner: Sascha Steinbiss <sa...@debian.org> * Package name: python-portpicker Version : 1.1.1 Upstream Author : Google * URL : https://github.com/google/python_portpicker * License : Apache-2.0 Programming Lang:

Re: about build flavours

2016-11-30 Thread Sascha Steinbiss
Hi Paul, >> Yes, the libhyperscan package alerts the user at pre-install time if >> SSE3 is not supported on the target system. That's one of the reasons >> why I think there should still be a version of suricata that works >> without Hyperscan. > > Sounds like they are doing it wrong. The

Re: about build flavours

2016-11-30 Thread Sascha Steinbiss
Hi Paul, [...] >> we are trying to create a build flavour for the suricata package [0], >> which we would like to link to hyperscan, which uses SSSE3. > > I hope it detects the presence of SSE3 at runtime. Yes, the libhyperscan package alerts the user at pre-install time if SSE3 is not

Re: about build flavours

2016-11-29 Thread Sascha Steinbiss
Hi Raphael, thanks, here are a few more thoughts. >> Currently, our main idea is to create a suricata-hyperscan package >> which includes the dependency to hyperscan, and the binary is build >> linked to the library. >> >> We distribute two /usr/bin/suricata binaries in two binary packages: >>

Bug#845561: ITP: pyaml -- module to produce pretty and readable YAML-serialized data

2016-11-24 Thread Sascha Steinbiss
Package: wnpp Severity: wishlist Owner: Sascha Steinbiss <sa...@debian.org> * Package name: pyaml Version : 16.11.4 Upstream Author : Mike Kazantsev * URL : https://github.com/mk-fg/pretty-yaml * License : WTFPL-2 Programming Lang: Python Descr

Accepted ricochet-im 1.1.4-1 (source amd64) into unstable

2016-11-19 Thread Sascha Steinbiss
ain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: ricochet-im - anonymous metadata-resistant instant messaging Closes: 828533 Changes: ricochet-im (1.1.4-1) unstable; urgency=medium . * Team upload. * New upstream release. (Closes: #828533) Ch

Accepted ariba 2.5.0+ds-1 (source amd64) into unstable

2016-11-19 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: ariba - Antibiotic Resistance Identification By Assembly Changes: ariba (2.5.0+ds-1) unstable; urgency=medium . * New upstream release. * Adjust dependency versions in d/control. Ch

Accepted python-pymummer 0.10.1-1 (source all) into unstable

2016-11-18 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: python3-pymummer - Python 3 interface to MUMmer Changes: python-pymummer (0.10.1-1) unstable; urgency=medium . * Team upload. * New upstream release. Checksums-Sha1: 8c3943032553b459b7228cd66fb79937c

Accepted python-pymummer 0.10.0-1 (source all) into unstable

2016-11-15 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: python3-pymummer - Python 3 interface to MUMmer Changes: python-pymummer (0.10.0-1) unstable; urgency=medium . * Team upload. * New upstream release. Checksums-Sha1: 9a622b68664bb953b5b09c4dd4a65e63f

Accepted golang-github-hydrogen18-stalecucumber 0.0~git20161112.0.1e918be-1 (source all) into unstable

2016-11-12 Thread Sascha Steinbiss
Maintainer: Debian Go Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-hydrogen18-stalecucumber-dev - Reader and writer for Python's pickle format in Golang Changes: golang-github-hydrogen18-stalec

Accepted s4cmd 2.0.1+ds-1 (source all) into unstable, unstable

2016-11-11 Thread Sascha Steinbiss
-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Wed, 09 Nov 2016 12:10:20 + Source: s4cmd Binary: s4cmd Architecture: source all Version: 2.0.1+ds-1 Distribution: unstable Urgency: low Maintainer: Sascha Steinbiss <sa...@debian.org> Changed-By: Sascha Steinbi

Bug#843758: ITP: s4cmd -- Super Amazon S3 command line tool

2016-11-09 Thread Sascha Steinbiss
Package: wnpp Severity: wishlist Owner: Sascha Steinbiss <sa...@debian.org> * Package name: s4cmd Version : 2.0.1 Upstream Author : BloomReach Inc. * URL : https://github.com/bloomreach/s4cmd * License : Apache Programming Lang: Python Descr

Accepted coyim 0.3.7-2 (source amd64) into unstable

2016-11-03 Thread Sascha Steinbiss
-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Thu, 03 Nov 2016 23:17:08 + Source: coyim Binary: coyim Architecture: source amd64 Version: 0.3.7-2 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.org> Changed-By: Sascha Steinbi

Accepted gubbins 2.2.0-1 (source amd64) into unstable

2016-11-03 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: gubbins- phylogenetic analysis of genome sequences Changes: gubbins (2.2.0-1) unstable; urgency=medium . * Team upload. * New upstream release. Checksums-Sha1: cbbe1167d983e4e93d5c7d09a7e23aed310bb42d 2153 gub

Accepted coyim 0.3.7-1 (source amd64) into unstable, unstable

2016-11-03 Thread Sascha Steinbiss
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 25 Oct 2016 08:34:58 +0200 Source: coyim Binary: coyim Architecture: source amd64 Version: 0.3.7-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.org> Changed-By: Sascha Steinbi

Accepted ariba 2.4.0+ds-1 (source amd64) into unstable

2016-11-02 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: ariba - Antibiotic Resistance Identification By Assembly Changes: ariba (2.4.0+ds-1) unstable; urgency=medium . * New upstream release. Checksums-Sha1: fe7dbfa295cd0818a90c7fe667ad2fe160e9b166 2176 ariba_2.

Re: Bug#842839: ITP: golang-github-golang-leveldb -- The LevelDB key-value database in the Go programming language.

2016-11-02 Thread Sascha Steinbiss
Dear Martin, >> This package is a Go version of the LevelDB lightweight key-value database. >> It is provided as a dependency of stenographer >> (https://github.com/google/stenographer). > > According to the webpage, this package is unfinished and experimental. Yes, now that I take a closer

Bug#842839: ITP: golang-github-golang-leveldb -- The LevelDB key-value database in the Go programming language.

2016-11-01 Thread Sascha Steinbiss
Package: wnpp Severity: wishlist Owner: Sascha Steinbiss <sa...@debian.org> * Package name: golang-github-golang-leveldb Version : 0.0~git20161002.0.64b1965-1 Upstream Author : The LevelDB-Go Authors * URL : https://github.com/golang/leveldb * License :

Accepted golang-github-thecreeper-go-notify 0.0~git20160203.0.b5cd147-1 (source all) into unstable, unstable

2016-10-27 Thread Sascha Steinbiss
Maintainer: Debian Go Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-thecreeper-go-notify-dev - implementation of the GNOME DBus Notifications Specification Closes: 841901 Changes: golang-github-thecreep

Accepted golang-github-twstrike-gotk3adapter 0.0~git20160819.0.3499960-1 (source all) into unstable, unstable

2016-10-27 Thread Sascha Steinbiss
Maintainer: Debian Go Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-twstrike-gotk3adapter-dev - adapters and interfaces for gotk3 Closes: 841899 Changes: golang-github-twstrike-gotk3

Accepted golang-github-hydrogen18-stalecucumber 0.0~git20161012.0.cd9ec28-1 (source all) into unstable, unstable

2016-10-27 Thread Sascha Steinbiss
Maintainer: Debian Go Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-hydrogen18-stalecucumber-dev - Reader and writer for Python's pickle format in Golang Closes: 841898 Changes: golang-githu

Accepted golang-github-dhowett-go-plist 0.0~git20160708.0.fec78c8-1 (source all) into unstable, unstable

2016-10-27 Thread Sascha Steinbiss
: Debian Go Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-dhowett-go-plist-dev - pure Go Apple Property List transcoder Closes: 841905 Changes: golang-github-dhowett-go-plist (0.0~git20160708.0.fec78c8

Accepted golang-github-twstrike-otr3 0.0~git20161015.0.744856d-1 (source all) into unstable, unstable

2016-10-27 Thread Sascha Steinbiss
Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-twstrike-otr3-dev - Go implementation of the OTR 3 protocol Closes: 841892 Changes: golang-github-twstrike-otr3 (0.0~git20161015.0.744856d-1) unstab

Accepted golang-github-voxelbrain-goptions 2.5.11-1 (source all) into unstable, unstable

2016-10-27 Thread Sascha Steinbiss
Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-voxelbrain-goptions-dev - flexible Go parser for command line options Closes: 841902 Changes: golang-github-voxelbrain-goptions (2.5.11-1) unstable; ur

Accepted golang-github-gotk3-gotk3 0.0~GOTK3~0~2~0+git20161020.501.2caa15f-1 (source all) into unstable, unstable

2016-10-27 Thread Sascha Steinbiss
: Debian Go Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-gotk3-gotk3-dev - Go bindings for GTK3 Closes: 841893 Changes: golang-github-gotk3-gotk3 (0.0~GOTK3~0~2~0+git20161020.501.2caa15f-1) unsta

Accepted gubbins 2.1.0-2 (source amd64) into unstable

2016-10-26 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: gubbins- phylogenetic analysis of genome sequences Closes: 839320 Changes: gubbins (2.1.0-2) unstable; urgency=medium . * Team upload. * Disable tests to address FTBFS caused by failed build time tests

Accepted samtools 1.3.1-3 (source) into unstable

2016-10-25 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: samtools - processing sequence alignments in SAM and BAM formats samtools-test - test files for the samtools package Closes: 840974 Changes: samtools (1.3.1-3) unstable; urgency=medium . * Team upload.

Bug#841905: ITP: golang-github-dhowett-go-plist -- pure Go Apple Property List transcoder

2016-10-24 Thread Sascha Steinbiss
Package: wnpp Severity: wishlist Owner: Sascha Steinbiss <sa...@debian.org> * Package name: golang-github-dhowett-go-plist Version : 0.0~git20160708.0.fec78c8-1 Upstream Author : Dustin L. Howett * URL : https://github.com/dhowett/go-plist * License

Bug#841902: ITP: golang-github-voxelbrain-goptions -- flexible Go parser for command line options

2016-10-24 Thread Sascha Steinbiss
Package: wnpp Severity: wishlist Owner: Sascha Steinbiss <sa...@debian.org> * Package name: golang-github-voxelbrain-goptions Version : 2.5.11-1 Upstream Author : voxelbrain * URL : https://github.com/voxelbrain/goptions * License : BSD-3-clause Progr

Bug#841901: ITP: golang-github-thecreeper-go-notify -- implementation of the GNOME DBus Notifications Specification

2016-10-24 Thread Sascha Steinbiss
Package: wnpp Severity: wishlist Owner: Sascha Steinbiss <sa...@debian.org> * Package name: golang-github-thecreeper-go-notify Version : 0.0~git20160203.0.b5cd147-1 Upstream Author : * URL : https://github.com/TheCreeper/go-notify * License : BSD-2-

Bug#841898: ITP: golang-github-hydrogen18-stalecucumber -- Reader and writer for Python's pickle format in Golang

2016-10-24 Thread Sascha Steinbiss
Package: wnpp Severity: wishlist Owner: Sascha Steinbiss <sa...@debian.org> * Package name: golang-github-hydrogen18-stalecucumber Version : 0.0~git20161012.0.cd9ec28-1 Upstream Author : Eric Urban * URL : https://github.com/hydrogen18/stalecucumber * L

Bug#841899: ITP: golang-github-twstrike-gotk3adapter -- adapters and interfaces for gotk3

2016-10-24 Thread Sascha Steinbiss
Package: wnpp Severity: wishlist Owner: Sascha Steinbiss <sa...@debian.org> * Package name: golang-github-twstrike-gotk3adapter Version : 0.0~git20160819.0.3499960-1 Upstream Author : STRIKE Team * URL : https://github.com/twstrike/gotk3adapter * License

Bug#841893: ITP: golang-github-gotk3-gotk3 -- Go bindings for GTK3

2016-10-24 Thread Sascha Steinbiss
Package: wnpp Severity: wishlist Owner: Sascha Steinbiss <sa...@debian.org> * Package name: golang-github-gotk3-gotk3 Version : GOTK3_0_2_0+git20161020.501.2caa15f-1 Upstream Author : Conformal Systems LLC. * URL : https://github.com/gotk3/gotk3 * License

Bug#841892: ITP: golang-github-twstrike-otr3 -- Go implementation of the OTR 3 protocol

2016-10-24 Thread Sascha Steinbiss
Package: wnpp Severity: wishlist Owner: Sascha Steinbiss <sa...@debian.org> * Package name: golang-github-twstrike-otr3 Version : 0.0~git20161015.0.744856d-1 Upstream Author : STRIKE Team * URL : https://github.com/twstrike/otr3 * License : G

Accepted python-pymummer 0.9.0-1 (source all) into unstable

2016-10-18 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: python3-pymummer - Python 3 interface to MUMmer Changes: python-pymummer (0.9.0-1) unstable; urgency=medium . * Team upload. * New upstream release. Checksums-Sha1: e7f6d212810c93a27880d3cb3cf36249d

Accepted princeprocessor 0.21-3 (source amd64) into unstable

2016-10-16 Thread Sascha Steinbiss
y-t...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: princeprocessor - standalone password candidate generator using the PRINCE algorith Closes: 840826 Changes: princeprocessor (0.21-3) unstable; urgency=medium . * Rename executable to avoi

Accepted princeprocessor 0.21-2 (source amd64) into unstable

2016-10-14 Thread Sascha Steinbiss
y-t...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: princeprocessor - standalone password candidate generator using the PRINCE algorith Changes: princeprocessor (0.21-2) unstable; urgency=medium . * Restrict architectures to 64-bit ones.

Accepted princeprocessor 0.21-1 (source amd64) into unstable, unstable

2016-10-13 Thread Sascha Steinbiss
-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Tue, 16 Aug 2016 05:49:21 + Source: princeprocessor Binary: princeprocessor Architecture: source amd64 Version: 0.21-1 Distribution: unstable Urgency: low Maintainer: Sascha Steinbiss <sa...@debian.org> Changed-By:

Accepted ariba 2.3.0+ds-1 (source amd64) into unstable

2016-10-12 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: ariba - Antibiotic Resistance Identification By Assembly Changes: ariba (2.3.0+ds-1) unstable; urgency=medium . * New upstream release. Checksums-Sha1: f9b89574d8a9af62277e91ae83fc4fb06ebf8d50 2176 ariba_2.

Accepted aragorn 1.2.38-1 (source amd64) into unstable

2016-10-12 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: aragorn- tRNA and tmRNA detection in nucleotide sequences Changes: aragorn (1.2.38-1) unstable; urgency=medium . * New upstream release. * Use upstream's manpage instead of building our own. * Fix minor spe

Accepted parsnp 1.2+dfsg-2 (source amd64) into unstable

2016-10-11 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: parsnp - rapid core genome multi-alignment Closes: 838174 Changes: parsnp (1.2+dfsg-2) unstable; urgency=medium . * Team upload. . [ Andreas Tille ] * Add copyright statement at ftpmaster request .

Accepted ruby-rgfa 1.3.1-1 (source all) into unstable

2016-10-11 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: ruby-rgfa - parse, edit and write GFA format graphs in Ruby Changes: ruby-rgfa (1.3.1-1) unstable; urgency=medium . * New upstream release. Checksums-Sha1: 063ad0a14d9f101e6e254dcb3991c06a87c460ea 1984 ruby-rgfa

Accepted ruby-rgfa 1.3-1 (source all) into unstable, unstable

2016-10-10 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: ruby-rgfa - parse, edit and write GFA format graphs in Ruby Closes: 838856 Changes: ruby-rgfa (1.3-1) unstable; urgency=medium . * Initial release (Closes: #838856) Checksums-Sha1: 3600cb854bcfecfc5682329ceec10e7a1

Accepted lambda-align 1.0.0-3 (source) into unstable

2016-10-10 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: lambda-align - Local Aligner for Massive Biological DatA Closes: 840027 Changes: lambda-align (1.0.0-3) unstable; urgency=medium . * Fix FTBFS on 32-bit platforms. Thanks to Hannes Hauswedell for patch review a

Accepted lambda-align 1.0.0-2 (source amd64) into unstable

2016-10-09 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: lambda-align - Local Aligner for Massive Biological DatA Closes: 840028 840156 Changes: lambda-align (1.0.0-2) unstable; urgency=medium . * Set versioned dependency for libseqan2-dev. Thanks to A

Accepted lambda-align 1.0.0-1 (source amd64) into unstable, unstable

2016-10-07 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: lambda-align - Local Aligner for Massive Biological DatA Closes: 834940 Changes: lambda-align (1.0.0-1) unstable; urgency=medium . * Initial release (Closes: #834940) Ch

Accepted circlator 1.3.1-1 (source all) into unstable

2016-09-30 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: circlator - circularize genome assemblies Changes: circlator (1.3.1-1) unstable; urgency=medium . * Team upload. * New upstream release. * Drop obsolete override. Checksums-Sha1: 3ab1d28704ebd1ba35a35d18f936

Accepted iva 1.0.7+ds-2 (source amd64) into unstable

2016-09-27 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: iva- iterative virus sequence assembler Changes: iva (1.0.7+ds-2) unstable; urgency=medium . * disable multiprocessing related test case to fix potential FTBFS Checksums-Sha1: 8e95f456a36c26f092f864e74594933ba

Bug#838856: ITP: ruby-rgfa -- Ruby library for handling GFA files

2016-09-25 Thread Sascha Steinbiss
Package: wnpp Severity: wishlist Owner: Sascha Steinbiss <sa...@debian.org> * Package name: ruby-rgfa Version : 1.2 Upstream Author : Giorgio Gonnella <gonne...@zbh.uni-hamburg.de> * URL : https://github.com/ggonnella/rgfa * License : ISC Prog

Accepted augustus 3.2.2+dfsg-2 (source all amd64) into unstable

2016-09-25 Thread Sascha Steinbiss
ian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: augustus - gene prediction in eukaryotic genomes augustus-data - data files for AUGUSTUS augustus-doc - documentation files for AUGUSTUS Changes: augustus (3.2.2+dfsg-2) unsta

Accepted seqan 1.4.2+dfsg-2 (source all) into unstable

2016-09-25 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: seqan-dev - C++ library for the analysis of biological sequences (development Changes: seqan (1.4.2+dfsg-2) unstable; urgency=medium . * Team upload. * Declare Conflicts: with libseqan2-dev (API incompatible)

Accepted seqan2 2.2.0+dfsg-2 (source all amd64) into unstable

2016-09-25 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: libseqan2-dev - C++ library for the analysis of biological sequences (development seqan-apps - C++ library for the analysis of biological sequences Closes: 838340 Changes: seqan2 (2.2.0+dfsg

Accepted roary 3.7.0+dfsg-1 (source all) into unstable

2016-09-24 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: roary - high speed stand alone pan genome pipeline Changes: roary (3.7.0+dfsg-1) unstable; urgency=medium . * New upstream release. * Fix spelling. Checksums-Sha1: 59810f2f48534edb2c674550da85b24889297448 2467

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