Accepted golang-github-hillu-go-yara 1.0.6-1 (source all) into unstable

pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-hillu-go-yara-dev - Go bindings for YARA Changes: golang-github-hillu-go-yara (1.0.6-1) unstable; urgency=medium . * New upstream release. * Bump Standards-Versi

Accepted iva 1.0.9+ds-1 (source amd64) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: iva- iterative virus sequence assembler Changes: iva (1.0.9+ds-1) unstable; urgency=medium . [ Steffen Moeller ] * debian/upstream/metadata: Added refs to registries . [ Sascha Steinbiss ] * New upst

Accepted ariba 2.10.3+ds-2 (source amd64) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: ariba - Antibiotic Resistance Identification By Assembly Changes: ariba (2.10.3+ds-2) unstable; urgency=medium . * Add d/upstream/metadata. Thanks to Steffen Moeller for providing registry information. * Bu

Accepted rna-star 2.5.4a+dfsg-1 (source amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: rna-star - ultrafast universal RNA-seq aligner Changes: rna-star (2.5.4a+dfsg-1) unstable; urgency=medium . [ Sascha Steinbiss ] * New upstream release. * d/control: Remove obsolete Testsuite entry.

Accepted golang-github-google-jsonapi 0.0~git20171108.0.e0fc4ee-1 (source all) into unstable, unstable

Go Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-google-jsonapi-dev - jsonapi.org style payload serializer and deserializer Closes: 887730 Changes: golang-github-google-jsonapi (0.0~git20171108

Accepted roary 3.12.0+dfsg-1 (source all) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: roary - high speed stand alone pan genome pipeline Changes: roary (3.12.0+dfsg-1) unstable; urgency=medium . * New upstream release. Checksums-Sha1: 714c8555b4507f56d8f30c96f3123091a1a4ec68 2535 roary_3.12.

Accepted python-filelock 3.0.0-2 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Tue, 23 Jan 2018 10:26:03 +0100 Source: python-filelock Binary: python-filelock python3-filelock Architecture: source all Version: 3.0.0-2 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.

Accepted roary 3.11.4+dfsg-1 (source all) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: roary - high speed stand alone pan genome pipeline Changes: roary (3.11.4+dfsg-1) unstable; urgency=medium . * New upstream release. * Bump Standards-Version. * Add patch to use a shebang line of #!/

Accepted python-filelock 3.0.0-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Wed, 17 Jan 2018 14:25:46 +0100 Source: python-filelock Binary: python-filelock python3-filelock Architecture: source all Version: 3.0.0-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.

Accepted golang-github-thecreeper-go-notify 0.0~git20160203.0.b5cd147-2 (source all) into unstable

Maintainer: Debian Go Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-thecreeper-go-notify-dev - implementation of the GNOME DBus Notifications Specification Changes: golang-github-thecreeper-go

Accepted python-pretty-yaml 17.12.1-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 28 Dec 2017 16:05:54 +0100 Source: python-pretty-yaml Binary: python-pretty-yaml python3-pretty-yaml Architecture: source all Version: 17.12.1-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <

Accepted spades 3.11.1+dfsg-1 (source amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: spades - genome assembler for single-cell and isolates data sets Changes: spades (3.11.1+dfsg-1) unstable; urgency=medium . [ Sascha Steinbiss ] * New upstream release. * Bump Standards-Version. * Rem

Accepted gnome-keysign 0.9.6-1~exp1 (source all) into experimental

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Fri, 15 Dec 2017 18:47:28 + Source: gnome-keysign Binary: gnome-keysign Architecture: source all Version: 0.9.6-1~exp1 Distribution: experimental Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.org> C

Accepted icdiff 1.9.1-2 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 12 Dec 2017 22:16:58 +0100 Source: icdiff Binary: icdiff Architecture: source all Version: 1.9.1-2 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.org> Changed-By: Sascha Steinbi

Accepted golang-github-hillu-go-yara 1.0.5-1 (source all) into unstable

pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-hillu-go-yara-dev - Go bindings for YARA Changes: golang-github-hillu-go-yara (1.0.5-1) unstable; urgency=medium . * New upstream release. * Bump Standards-Versi

Accepted genometools 1.5.10+ds-2 (source all amd64) into unstable

: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools gen

Accepted fastaq 3.16.0-1 (source all) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: fastaq - FASTA and FASTQ file manipulation tools Changes: fastaq (3.16.0-1) unstable; urgency=medium . [ Steffen Moeller ] * debian/upstream/metadata: Added references to registries. . [ Sascha Steinbis

Accepted ariba 2.10.3+ds-1 (source amd64) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: ariba - Antibiotic Resistance Identification By Assembly Changes: ariba (2.10.3+ds-1) unstable; urgency=medium . * New upstream release. Checksums-Sha1: dbff717a54fe5f010974cb1e23ed0c7c5a3f29ad 1938 ariba_2.1

Accepted sspace 2.1.1+dfsg-3 (source all) into unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: sspace - scaffolding pre-assembled contigs after extension Changes: sspace (2.1.1+dfsg-3) unstable; urgency=medium . * Allow stderr output in autopkgtest. * Bump Standards-Version. Ch

Accepted python-filelock 2.0.13-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Tue, 14 Nov 2017 12:03:17 +0100 Source: python-filelock Binary: python-filelock python3-filelock Architecture: source all Version: 2.0.13-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.

Accepted pktanon 2~git20160407.0.2bde4f2+dfsg-3 (source amd64) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 07 Nov 2017 09:27:01 +0100 Source: pktanon Binary: pktanon Architecture: source amd64 Version: 2~git20160407.0.2bde4f2+dfsg-3 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.org> C

Accepted golang-github-gocql-gocql 0.0~git20171009.0.2416cf3-2 (source all) into unstable

Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-gocql-gocql-dev - fast and robust Cassandra client for Go Changes: golang-github-gocql-gocql (0.0~git20171009.0.2416cf3-2) unstable; urgency=medium .

Accepted python-portpicker 1.2.0-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Fri, 27 Oct 2017 15:06:15 +0200 Source: python-portpicker Binary: python-portpicker python3-portpicker Architecture: source all Version: 1.2.0-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.

Accepted golang-github-hillu-go-yara 1.0.4-1 (source all) into unstable

pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-hillu-go-yara-dev - Go bindings for YARA Changes: golang-github-hillu-go-yara (1.0.4-1) unstable; urgency=medium . * New upstream release. * Adjust d/copyright dat

Accepted stenographer 0.0~git20161206.0.66a8e7e-6 (source all amd64) into unstable

: Hilko Bengen <ben...@debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: stenographer - full-packet-capture utility -- server stenographer-client - full-packet-capture utility -- clients stenographer-common - full-packet-capture utility -- common files Cl

Accepted golang-gopkg-inf.v0 0.9.0-1 (source all) into unstable, unstable

ain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-gopkg-inf.v0-dev - Golang library for "infinite-precision" decimal arithmetic Closes: 878386 Changes: golang-gopkg-inf.v0 (0.9.0-1) unstable; urgency=medium . * Initial re

Accepted golang-github-gocql-gocql 0.0~git20171009.0.2416cf3-1 (source all) into unstable, unstable

Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-gocql-gocql-dev - fast and robust Cassandra client for Go Closes: 878400 Changes: golang-github-gocql-gocql (0.0~git20171009.0.2416cf3-1) unstable; ur

Accepted golang-github-neowaylabs-wabbit 0.0~git20170928.0.c9585b6-1 (source all) into unstable

: Debian Go Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-neowaylabs-wabbit-dev - Golang AMQP mocking library Changes: golang-github-neowaylabs-wabbit (0.0~git20170928.0.c9585b6-1) unstable; ur

Accepted golang-github-stvp-tempredis 0.0~git20160122.0.83f7aae-1 (source all) into unstable, unstable

Go Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-stvp-tempredis-dev - Go package to start and stop temporary redis-server processes Closes: 878294 Changes: golang-github-stvp-te

Accepted coyim 0.3.8+ds-4 (source amd64) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Thu, 12 Oct 2017 14:29:50 +0200 Source: coyim Binary: coyim Architecture: source amd64 Version: 0.3.8+ds-4 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.org> Changed-By: Sascha Steinbi

Accepted onioncircuits 0.5-1 (source all) into unstable

ain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: onioncircuits - GTK+ application to display Tor circuits and streams Closes: 865843 Changes: onioncircuits (0.5-1) unstable; urgency=medium . * New upstream release. * Use AppArmor profile file f

Accepted roary 3.11.0+dfsg-1 (source all) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: roary - high speed stand alone pan genome pipeline Changes: roary (3.11.0+dfsg-1) unstable; urgency=medium . * New upstream release. * Bump Standards-Version. * Remove obsolete Testsuite: entry in d/contr

Accepted python-pretty-yaml 17.10.0-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Tue, 10 Oct 2017 10:48:00 +0200 Source: python-pretty-yaml Binary: python-pretty-yaml python3-pretty-yaml Architecture: source all Version: 17.10.0-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <

Accepted icdiff 1.9.1-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Fri, 06 Oct 2017 00:05:35 +0200 Source: icdiff Binary: icdiff Architecture: source all Version: 1.9.1-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.org> Changed-By: Sascha Steinbi

Accepted mash 2.0-2 (source amd64 all) into unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: libmash-dev - development headers and static library for Mash mash - fast genome and metagenome distance estimation using MinHash mash-doc - documentation for Mash Changes: mash (2.0-2) unsta

Accepted gubbins 2.3.1-1 (source amd64) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: gubbins- phylogenetic analysis of genome sequences Changes: gubbins (2.3.1-1) unstable; urgency=medium . * Team upload. * New upstream release. * Bump Standards-Version. Ch

Accepted mash 2.0-1 (source amd64 all) into unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: libmash-dev - development headers and static library for Mash mash - fast genome and metagenome distance estimation using MinHash mash-doc - documentation for Mash Changes: mash (2.0-1) unsta

Accepted pktanon 2~git20160407.0.2bde4f2+dfsg-2 (source amd64) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Wed, 20 Sep 2017 16:08:46 +0200 Source: pktanon Binary: pktanon Architecture: source amd64 Version: 2~git20160407.0.2bde4f2+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.org> C

Accepted pktanon 2~git20160407.0.2bde4f2+dfsg-1 (source amd64) into unstable, unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 09 May 2017 13:44:18 +0200 Source: pktanon Binary: pktanon Architecture: source amd64 Version: 2~git20160407.0.2bde4f2+dfsg-1 Distribution: unstable Urgency: low Maintainer: Sascha Steinbiss <sa...@debian.org> C

Accepted roary 3.10.2+dfsg-1 (source all) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: roary - high speed stand alone pan genome pipeline Changes: roary (3.10.2+dfsg-1) unstable; urgency=medium . * New upstream release. * Switch back to basic in dist.ini. * Add missing runtime dep on libdig

Accepted python-filelock 2.0.12-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 04 Sep 2017 15:07:59 +0200 Source: python-filelock Binary: python-filelock python3-filelock Architecture: source all Version: 2.0.12-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.

Accepted datatables.js 1.10.16+dfsg-1 (source all) into unstable

pkg-javascript-de...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: libjs-jquery-datatables - jQuery plug-in that makes nice tables from different data sources Changes: datatables.js (1.10.16+dfsg-1) unstable; urgency=medium . * New upstream relea

Accepted bio-tradis 1.3.3+dfsg-2 (source all) into unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: bio-tradis - analyse the output from TraDIS analyses of genomic sequences Closes: 866074 Changes: bio-tradis (1.3.3+dfsg-2) unstable; urgency=medium . * Team upload. * Add missing test dependencies. Clo

Accepted gfapy 1.0.0+dfsg-1 (source amd64) into unstable, unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: python3-gfapy - flexible and extensible software library for handling sequence gr Closes: 869969 Changes: gfapy (1.0.0+dfsg-1) unstable; urgency=low . * Initial packaging (Closes: #869969) Ch

Accepted gfapy 1.0.0+dfsg-2 (source amd64) into unstable, unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: python3-gfapy - flexible and extensible software library for handling sequence gr Changes: gfapy (1.0.0+dfsg-2) unstable; urgency=medium . * Fix upstream info YAML. Ch

Accepted peframe 5.0.1+git20170303.0.e482def+dfsg-1 (source all) into unstable, unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Fri, 30 Jun 2017 15:15:22 +0200 Source: peframe Binary: peframe Architecture: source all Version: 5.0.1+git20170303.0.e482def+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.org> C

Accepted roary 3.9.1+dfsg-1 (source all) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: roary - high speed stand alone pan genome pipeline Changes: roary (3.9.1+dfsg-1) unstable; urgency=medium . [ Steffen Moeller ] * debian/upstream/metadata: Set references to registries . [ Sascha Steinbis

Accepted python-pretty-yaml 17.8.0-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Fri, 18 Aug 2017 09:20:00 +0200 Source: python-pretty-yaml Binary: python-pretty-yaml python3-pretty-yaml Architecture: source all Version: 17.8.0-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <

Accepted golang-github-neowaylabs-wabbit 0.0~git20170406.0.cfb5237-2 (source all) into unstable

: Debian Go Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-neowaylabs-wabbit-dev - Golang AMQP mocking library Changes: golang-github-neowaylabs-wabbit (0.0~git20170406.0.cfb5237-2) unstable; ur

Accepted golang-github-dcso-bloom 0.2.0-1 (source amd64 all) into unstable

: Debian Go Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-dcso-bloom-cli - highly efficient bloom filter implementation for Go, CLI tool golang-github-dcso-bloom-dev - highly efficient

Accepted ariba 2.10.1+ds-1 (source) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: ariba - Antibiotic Resistance Identification By Assembly Closes: 870362 Changes: ariba (2.10.1+ds-1) unstable; urgency=medium . * New upstream release. Closes: #870362 Checksums-Sha1: a09ceb054fadee1274d2850e7b25

Accepted grr 3.1.0.2+dfsg-4 (source all amd64) into unstable

-de...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: grr-client-templates-installer - incident response framework - installer for client templates grr-server - incident response framework - server Changes: grr (3.1.0.2+dfsg-4) unstable; ur

Accepted forensic-artifacts 20170808-1 (source all) into unstable

Steinbiss <sa...@debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: forensic-artifacts - knowledge base of forensic artifacts (data files) python-artifacts - knowledge base of forensic artifacts (Python 2) python3-artifacts - knowledge base of forensic artifacts (Pytho

Accepted coyim 0.3.8+ds-3 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sun, 13 Aug 2017 10:13:48 -0400 Source: coyim Binary: coyim Architecture: source Version: 0.3.8+ds-3 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.org> Changed-By: Sascha Steinbi

Accepted last-align 869-1 (source) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: last-align - genome-scale comparison of biological sequences Closes: 866438 Changes: last-align (869-1) unstable; urgency=low . * Team upload. . [ Steffen Moeller ] * [debian/upstream/metadata] Added references to

Accepted roary 3.9.0+dfsg-1 (source all) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: roary - high speed stand alone pan genome pipeline Changes: roary (3.9.0+dfsg-1) unstable; urgency=medium . * New upstream release. * Bump Standards-Version. Checksums-Sha1: 83bc12a11d947f4b2695f302cec17950b

Accepted spades 3.10.1+dfsg-3 (source amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: spades - genome assembler for single-cell and isolates data sets Closes: 853666 Changes: spades (3.10.1+dfsg-3) unstable; urgency=medium . * Fix FTBFS with GCC 7. Closes: #853666 * Update homepag

Accepted rna-star 2.5.3a+dfsg-3 (source amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: rna-star - ultrafast universal RNA-seq aligner Closes: 868742 Changes: rna-star (2.5.3a+dfsg-3) unstable; urgency=medium . [ Steffen Moeller ] * debian/upstream/metadata: Added refs to bio.tools a

Accepted muscle 1:3.8.31+dfsg-3 (source amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: muscle - Multiple alignment program of protein sequences Closes: 871513 Changes: muscle (1:3.8.31+dfsg-3) unstable; urgency=medium . * Team upload. * Fix FTCBFS: Do not hard code build architectur

Accepted crac 2.5.0+dfsg-2 (source amd64) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: crac - integrated RNA-Seq read analysis Closes: 859300 Changes: crac (2.5.0+dfsg-2) unstable; urgency=low . [ Steffen Moeller ] * debian/upstream/metadata: Added reference to registries * debian/copyrigh

Accepted forensic-artifacts 20170806-1 (source all) into unstable

Steinbiss <sa...@debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: forensic-artifacts - knowledge base of forensic artifacts (data files) python-artifacts - knowledge base of forensic artifacts (Python 2) python3-artifacts - knowledge base of forensic artifacts (Pytho

Accepted genometools 1.5.10+ds-1 (source all amd64) into unstable

: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools gen

Accepted python-pretty-yaml 17.7.2-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 31 Jul 2017 10:20:20 +0200 Source: python-pretty-yaml Binary: python-pretty-yaml python3-pretty-yaml Architecture: source all Version: 17.7.2-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <

Accepted bcftools 1.4.1-3 (source amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: bcftools - genomic variant calling and manipulation of VCF/BCF files Changes: bcftools (1.4.1-3) unstable; urgency=medium . * Team upload. * Incorporate patches from Ubuntu to fix FTBFS on some 32-bit arc

Accepted augustus 3.3+dfsg-2 (source all amd64) into unstable

ian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: augustus - gene prediction in eukaryotic genomes augustus-data - data files for AUGUSTUS augustus-doc - documentation files for AUGUSTUS Closes: 869126 Changes: augustus (3.3+dfsg

Accepted golang-github-buger-jsonparser 0.0~git20170705.0.9addec9-1 (source all) into unstable

: Debian Go Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-buger-jsonparser-dev - fast schemaless JSON parser for Go Changes: golang-github-buger-jsonparser (0.0~git20170705.0.9addec9-1) unstable; ur

Accepted python-filelock 2.0.11-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 20 Jul 2017 14:51:35 +0200 Source: python-filelock Binary: python-filelock python3-filelock Architecture: source all Version: 2.0.11-1 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.

Accepted golang-github-jasonish-go-idsrules 0.0~git20170503.0.c646b91-1 (source all) into unstable, unstable

Maintainer: Debian Go Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-jasonish-go-idsrules-dev - Go IDS rule parser Closes: 868746 Changes: golang-github-jasonish-go-idsrules (0.0~git20170503.0.c646b91

Accepted augustus 3.3+dfsg-1 (source all amd64) into unstable

ian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: augustus - gene prediction in eukaryotic genomes augustus-data - data files for AUGUSTUS augustus-doc - documentation files for AUGUSTUS Changes: augustus (3.3+dfsg-1) unstable; ur

Accepted golang-github-dcso-bloom 0.1.0-1 (source amd64 all) into unstable

: Debian Go Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-dcso-bloom-cli - highly efficient bloom filter implementation for Go, CLI tool golang-github-dcso-bloom-dev - highly efficient

Accepted htslib 1.4.1-3 (source all amd64) into unstable

med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: htslib-test - Test data for HTSlib libhts-dev - Development files for the HTSlib libhts2- C library for high-throughput sequencing data formats tabix - generic indexer for TAB-deli

Accepted golang-github-dcso-bloom 0.0~git20170609.0.48c97c2-1 (source amd64 all) into unstable, unstable

: medium Maintainer: Debian Go Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-dcso-bloom-cli - highly efficient bloom filter implementation for Go, CLI tool golang-github-dcso-bloom-dev - highly eff

Accepted seqan2 2.3.1+dfsg-5 (source all amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: libseqan2-dev - C++ library for the analysis of biological sequences (development seqan-apps - C++ library for the analysis of biological sequences Closes: 862484 Changes: seqan2 (2.3.1+dfsg

Accepted hmmer2 2.3.2+dfsg-4 (source amd64 all) into unstable

<debian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: hmmer2 - profile hidden Markov models for protein sequence analysis hmmer2-doc - profile hidden Markov models for protein sequence analysis (docs) hmmer2-pvm - HMMER progr

Accepted libsmithwaterman 0.0+20160702-3 (source amd64) into unstable

Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: libsmithwaterman-dev - determine similar regions between two strings or genomic sequence libsmithwaterman0 - determine similar regions between two string

Accepted cd-hit 4.6.8-1 (source amd64) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: cd-hit - suite of programs designed to quickly group sequences Closes: 866330 Changes: cd-hit (4.6.8-1) unstable; urgency=medium . * Team upload. * New upstream release. * Make build reproducible, thanks t

Accepted lambda-align 1.0.2-1 (source amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: lambda-align - Local Aligner for Massive Biological DatA Changes: lambda-align (1.0.2-1) unstable; urgency=medium . [ Andreas Tille ] * Add missing citation. . [ Sascha Steinbiss ] * New upst

Accepted ariba 2.10.0+ds-1 (source amd64) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: ariba - Antibiotic Resistance Identification By Assembly Changes: ariba (2.10.0+ds-1) unstable; urgency=medium . * New upstream release. * Bump Standards-Version. Checksums-Sha1: a2606183df5fa4264421b82b1fdb

Accepted golang-github-hillu-go-yara 1.0.3-1 (source all) into unstable

pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-hillu-go-yara-dev - Go bindings for YARA Changes: golang-github-hillu-go-yara (1.0.3-1) unstable; urgency=medium . * New upstream release. * Bump Standards-Versio

Accepted circlator 1.5.1-1 (source all) into unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: circlator - circularize genome assemblies Changes: circlator (1.5.1-1) unstable; urgency=medium . * Team upload. * New upstream release. * Add Build-dep on canu (for running tests). * Add Sugg

Accepted yara-python 3.6.1+ds-1 (source amd64) into unstable

hanged-By: Sascha Steinbiss <sa...@debian.org> Description: python-yara - Python 2 bindings for YARA python3-yara - Python 3 bindings for YARA Closes: 863837 Changes: yara-python (3.6.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream release. Closes: #863837 * Use

Accepted forensic-artifacts 20170618-1 (source all) into unstable

Steinbiss <sa...@debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: forensic-artifacts - knowledge base of forensic artifacts (data files) python-artifacts - knowledge base of forensic artifacts (Python 2) python3-artifacts - knowledge base of forensic artifacts (Pytho

Accepted genometools 1.5.9+ds-5 (source all amd64) into unstable

Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for

Accepted libhat-trie 0.1.2-1 (source amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: libhat-trie-dev - Development headers and static libraries for HAT-trie library libhat-trie0 - HAT-trie, an extremely efficient (space and time) modern variant Closes: 865039 865040 Changes: libhat

Accepted coyim 0.3.8+ds-2 (source amd64) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 19 Jun 2017 12:21:29 +0200 Source: coyim Binary: coyim Architecture: source amd64 Version: 0.3.8+ds-2 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.org> Changed-By: Sascha Steinbi

Accepted onioncircuits 0.4-4 (source all) into unstable

ain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: onioncircuits - GTK+ application to display Tor circuits and streams Changes: onioncircuits (0.4-4) unstable; urgency=medium . * Upload to unstable. . onioncircuits (0.4-4~exp1) experimental; ur

Accepted golang-github-twstrike-gotk3adapter 0.0~git20170505.0.901a95d+ds-2 (source all) into unstable

Maintainer: Debian Go Packaging Team <pkg-go-maintain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: golang-github-twstrike-gotk3adapter-dev - adapters and interfaces for gotk3 Changes: golang-github-twstrike-gotk3adapter (0.0~git20170505.0.

Accepted datatables.js 1.10.15+dfsg-2 (source all) into unstable

pkg-javascript-de...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: libjs-jquery-datatables - jQuery plug-in that makes nice tables from different data sources Changes: datatables.js (1.10.15+dfsg-2) unstable; urgency=medium . * Upload to unstable. . d

Accepted rna-star 2.5.3a+dfsg-2 (source amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: rna-star - ultrafast universal RNA-seq aligner Changes: rna-star (2.5.3a+dfsg-2) unstable; urgency=medium . * Upload to unstable. . rna-star (2.5.3a+dfsg-1) experimental; urgency=medium . * New upst

Accepted snp-sites 2.3.3-2 (source amd64) into unstable

ian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: libsnp-sites1 - Shared libraries of the package snp-sites libsnp-sites1-dev - Static libraries and header files for the package snp-sites snp-sites - Binary code for the package snp-s

Accepted fastaq 3.15.0-2 (source all) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: fastaq - FASTA and FASTQ file manipulation tools Changes: fastaq (3.15.0-2) unstable; urgency=medium . * Upload to unstable. . fastaq (3.15.0-1) experimental; urgency=medium . * New upstream release. *

Accepted spades 3.10.1+dfsg-2 (source amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: spades - genome assembler for single-cell and isolates data sets Changes: spades (3.10.1+dfsg-2) unstable; urgency=medium . * Upload to unstable. . spades (3.10.1+dfsg-1) experimental; urgency=medium .

Accepted libtabixpp 1.0.0-3 (source amd64) into unstable

ian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: libtabixpp-dev - C++ wrapper to tabix indexer (development files) libtabixpp0 - C++ wrapper to tabix indexer libtabixpp0-dbg - C++ wrapper to tabix indexer (debug symbols) Closes: 86

Accepted roary 3.8.2+dfsg-2 (source all) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: roary - high speed stand alone pan genome pipeline Changes: roary (3.8.2+dfsg-2) unstable; urgency=medium . * Upload to unstable. . roary (3.8.2+dfsg-1) experimental; urgency=medium . * New upstream releas

Accepted libhat-trie 0.1.1-2 (source amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: libhat-trie-dev - Development headers and static libraries for HAT-trie library libhat-trie0 - HAT-trie, an extremely efficient (space and time) modern variant Changes: libhat-trie (0.1.1-2) unsta

Accepted icdiff 1.9.0-2 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sun, 18 Jun 2017 11:09:50 + Source: icdiff Binary: icdiff Architecture: source all Version: 1.9.0-2 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.org> Changed-By: Sascha Steinbi

Accepted python-filelock 2.0.10-2 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sun, 18 Jun 2017 11:02:54 + Source: python-filelock Binary: python-filelock python3-filelock Architecture: source all Version: 2.0.10-2 Distribution: unstable Urgency: medium Maintainer: Sascha Steinbiss <sa...@debian.

Accepted forensic-artifacts 20170522-2 (source all) into unstable

Steinbiss <sa...@debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: forensic-artifacts - knowledge base of forensic artifacts (data files) python-artifacts - knowledge base of forensic artifacts (Python 2) python3-artifacts - knowledge base of forensic artifacts (Pytho

Accepted barrnap 0.8+dfsg-2 (source all) into unstable

kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: barrnap- rapid ribosomal RNA prediction Changes: barrnap (0.8+dfsg-2) unstable; urgency=medium . * Upload to unstable. . barrnap (0.8+dfsg-1) experimental; urgency=medium . * New upstream release. * Adjus

Accepted ariba 2.9.4+ds-2 (source amd64) into unstable

org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: ariba - Antibiotic Resistance Identification By Assembly Changes: ariba (2.9.4+ds-2) unstable; urgency=medium . * Upload to unstable. . ariba (2.9.4+ds-1) experimental; urgency=medium . * New upstream versio

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