Re: [Debian Wiki] Update of DebianMedMIME by SteffenMoeller

2008-02-15 Thread Charles Plessy
Le Fri, Feb 15, 2008 at 08:56:56AM +0100, Andreas Tille a écrit : I'm wondering whether we should add these mime rules to the meta package Hi Andreas, the long term goal is to sumbit these rules to FreeDesktop once they are tested and established. In the meantime, factorization is of course

Re: [Debian Wiki] Update of DebianMedMIME by SteffenMoeller

2008-02-15 Thread Andreas Tille
On Fri, 15 Feb 2008, Charles Plessy wrote: the long term goal is to sumbit these rules to FreeDesktop once they are tested and established. In the meantime, factorization is of course welcome. Are you suggesting to add the rules to med-bio, or to create another package ? I think, med-bio

Someone prepared to package GAMGI (molecular visualisation and editing)

2008-02-15 Thread Steffen Moeller
Dear all, I just tried to compile GAMGI but it does not work out of the box and I feel that it is most likely due to some version incompatibilities that I have not addressed properly. The project is hosted here http://www.gamgi.org/ and Carlos, the upstream author, would very much like to see

Re: Someone prepared to package GAMGI (molecular visualisation and editing)

2008-02-15 Thread Andreas Tille
On Fri, 15 Feb 2008, Steffen Moeller wrote: If someone would have an idea on what to change then this would be brilliant. In the past I was quite lucky when I addressed this kind of issues on debian-devel list. Specific knowledge and willingness to help are a really helpful resource. Kind

Automake help with libGenome

2008-02-15 Thread Andreas Tille
Hi, as you might have noticed I try to package http://gel.ahabs.wisc.edu/mauve/source/libGenome-1.3.0.tar.gz I found out that the soname of the library gets the version added twice and this the resulting package name would be libgenome-1.3-1.3-1. To prevent this I applied the following

Re: Automake help with libGenome

2008-02-15 Thread Andreas Tille
On Fri, 15 Feb 2008, Steve M. Robbins wrote: and runned autoreconf. On one hand this had the expected result but now the build process does not add the extension '.so' any more. I wouldn't expect your changes to suppress building the shared library. The only thing I can think of is that

Re: ITK Python Bindings

2008-02-15 Thread Gabriel Grant
Steve, Thanks so much for doing this. I more expected this to end up as yet another item on the bottom of your TODO list. Looking at the ITK source, it seems that WrapITK has in fact been incorporated into the main distribution, but the documentation doesn't seem to have been updated to reflect

Re: Automake help with libGenome

2008-02-15 Thread Steve M. Robbins
On Fri, Feb 15, 2008 at 05:23:44PM +0100, Andreas Tille wrote: I found out that the soname of the library gets the version added twice and this the resulting package name would be libgenome-1.3-1.3-1. To prevent this I applied the following patch --- libGenome/Makefile.am.orig 2007-01-31

Bug#466017: New version available, homepage has changed

2008-02-15 Thread Andreas Tille
Package: clustalw-mpi Version: 0.13-3 Severity: wishlist Hi, at the page http://kmlvli.com/kuobin/clustalw-mpi/index.html you can find version 0.14 of this software. Please consider upgrading the package and when doing so please turn the homepage in the package description into a parseable tag

Re: ITK Python Bindings

2008-02-15 Thread Steve M. Robbins
Hi, I put the .debs on http://people.debian.org/~smr/ On Fri, Feb 15, 2008 at 05:04:10PM -0500, Gabriel Grant wrote: Thanks so much for doing this. I more expected this to end up as yet another item on the bottom of your TODO list. Well, it has been on my TODO list for more months than I

Re: Bootstrapping GT.M

2008-02-15 Thread Andreas Tille
Hi, I'm just forewarding the answer of upstream about the possibilities for the bootstrapping process ... Any comments? Kind regards Andreas. -- Forwarded message -- Date: Fri, 15 Feb 2008 17:38:59 -0500 From: K.S. Bhaskar [EMAIL PROTECTED] To: Andreas Tille [EMAIL