Re: BLAST+ speed & build issues

2011-08-03 Thread Steffen Möller
Dear Tim, Have many thanks for raising this issue. It is weird. But this is exactly why we have this list IMHO. On 08/03/2011 10:48 AM, Tim Booth wrote: > Hi, > >> Creating a "static" package would be easy, but would double the size >> (which is large) for blast+ on servers, > > Actually, it m

Re: Blog about Debian Med BOF

2011-08-03 Thread Andreas Tille
Hi Tony, On Wed, Aug 03, 2011 at 01:49:36PM +0100, Tony Travis wrote: > I learned a lot at the sprint, and I now realise that there is a lot of > interest in creating bioinformatics packages for Debian Med. However, my > point remains that it isn't obvious to people who don't already know >

Re: Blog about Debian Med BOF

2011-08-03 Thread Tony Travis
On 03/08/11 13:09, Olivier Sallou wrote: furthermore, regarding biomed, there are some others such naming such as Biomed central for publications People could thing there is a link. Hi, Olivier and Andreas. As I said in Travemuende, it is not obvious to me that "Med" includes bioinformati

Re: Blog about Debian Med BOF

2011-08-03 Thread Olivier Sallou
furthermore, regarding biomed, there are some others such naming such as Biomed central for publications People could thing there is a link. Olivier Le 8/3/11 2:04 PM, Andreas Tille a écrit : > Hi Tony, > > On Wed, Aug 03, 2011 at 12:18:23PM +0100, Tony Travis wrote: >> I said that "Debian Me

Re: Blog about Debian Med BOF

2011-08-03 Thread Andreas Tille
Hi Tony, On Wed, Aug 03, 2011 at 12:18:23PM +0100, Tony Travis wrote: > > I said that "Debian Med" is quite misleading, and suggested changing it > to "Debian Biomed", which more accurately reflects the target audience. Renaming an existing project is a *big* and *time consuming* effort. In any

Re: Blog about Debian Med BOF

2011-08-03 Thread Andreas Tille
On Wed, Aug 03, 2011 at 08:48:02AM -0300, Nelson A. de Oliveira wrote: > On Wed, Aug 3, 2011 at 8:35 AM, Nelson A. de Oliveira > wrote: > > If I did it right, it should appear as "Debian Med" > > Already updated. It's there! :-) Great! Thanks Andreas. -- http://fam-tille.de -- To

Re: Blog about Debian Med BOF

2011-08-03 Thread Tony Travis
On 03/08/11 12:11, Nelson A. de Oliveira wrote: Hi! On Wed, Aug 3, 2011 at 6:26 AM, Andreas Tille wrote: BTW, is there anybody who might care for including the Debian Med blog into planet.debian.org? The name that will appear on Planet is better as "Debian Med" or "Debian in Biology and Medi

Re: Blog about Debian Med BOF

2011-08-03 Thread Nelson A. de Oliveira
On Wed, Aug 3, 2011 at 8:35 AM, Nelson A. de Oliveira wrote: > If I did it right, it should appear as "Debian Med" Already updated. It's there! :-) -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Arch

Re: Blog about Debian Med BOF

2011-08-03 Thread Nelson A. de Oliveira
Hi! On Wed, Aug 3, 2011 at 8:21 AM, Andreas Tille wrote: > As a planet.d.o ignorant I can not give good advise here.  If the usual > Blogs are issued by *persons* the "Debian Med Team" is probably matching > this person-approach.  If also *projects* are posting there any of the > above suggestion

Re: Blog about Debian Med BOF

2011-08-03 Thread Andreas Tille
On Wed, Aug 03, 2011 at 08:12:02AM -0300, Nelson A. de Oliveira wrote: > On Wed, Aug 3, 2011 at 8:11 AM, Nelson A. de Oliveira > wrote: > > The name that will appear on Planet is better as "Debian Med" or > > "Debian in Biology and Medicine"? > > Or "Debian Med Team" or a better name :-) As a p

Re: Blog about Debian Med BOF

2011-08-03 Thread Nelson A. de Oliveira
On Wed, Aug 3, 2011 at 8:11 AM, Nelson A. de Oliveira wrote: > The name that will appear on Planet is better as "Debian Med" or > "Debian in Biology and Medicine"? Or "Debian Med Team" or a better name :-) Best regards, Nelson -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org wi

Re: Blog about Debian Med BOF

2011-08-03 Thread Nelson A. de Oliveira
Hi! On Wed, Aug 3, 2011 at 6:26 AM, Andreas Tille wrote: > BTW, is there anybody who might care for including the Debian Med blog > into planet.debian.org? The name that will appear on Planet is better as "Debian Med" or "Debian in Biology and Medicine"? Best regards, Nelson -- To UNSUBSCRIB

Blog about Debian Med BOF

2011-08-03 Thread Andreas Tille
Hi, I wrote a short Blog entry about the BOF at DebConf 11: http://debianmed.blogspot.com/ BTW, is there anybody who might care for including the Debian Med blog into planet.debian.org? Kind regards Andreas. -- http://fam-tille.de -- To UNSUBSCRIBE, email to debian-med-requ...@l

Re: BLAST+ speed & build issues

2011-08-03 Thread Tim Booth
Hi, > Creating a "static" package would be easy, but would double the size > (which is large) for blast+ on servers, Actually, it makes it about 8x the size, as each binary has its own copies of every library. > and it could be confusing for > the user, no? (selecting between dynamic and static