Re: Yaml-cpp now in collab-maint git (Was: Maintaining yaml-cpp in collab-maint? (Was: [MoM] Packaging OpenSurgSim))

2015-02-17 Thread Paul Novotny
On Tue, Feb 17, 2015, at 09:50 AM, Andreas Tille wrote: > Hi Paul, > > On Mon, Feb 09, 2015 at 08:07:37PM -0500, p...@paulnovo.us wrote: > > > > Please grant access for Paul Novotny (paulnovo-guest) to > > collab-maint. We are going to work together on project yaml-cpp. > > Did you heard anythin

Re: How to submit software for addition to BioLinux?

2015-02-17 Thread Tim Booth
Hi Simon, As you've probably guessed, the correct answer is (A) but it might not be as bad as you think because: 1) Most small Java libraries are actually very easy to package 2) Most updates to small Java libraries are trivial to push through 3) You are not alone - both Debian Med and Debian Jav

Re: Yaml-cpp now in collab-maint git (Was: Maintaining yaml-cpp in collab-maint? (Was: [MoM] Packaging OpenSurgSim))

2015-02-17 Thread Andreas Tille
Hi Paul, On Mon, Feb 09, 2015 at 08:07:37PM -0500, p...@paulnovo.us wrote: > > Please grant access for Paul Novotny (paulnovo-guest) to > collab-maint. We are going to work together on project yaml-cpp. Did you heard anything or tried whether its working now? Should I ping again? If the delay

Re: Bug#778589: ITP: express -- Streaming quantification for high-throughput sequencing

2015-02-17 Thread Andreas Tille
Hi Michael, On Tue, Feb 17, 2015 at 12:10:44PM +0100, Jérémy Lal wrote: > mind that "express" is probably a too generic name, and it could lead > to a name conflict in the past/future, especially if it provides a binary > named `express`. > > I hope this will help avoiding a disaster :) I'm not

Re: plink1.9_1.90~b3b-150117-1_amd64.changes REJECTED

2015-02-17 Thread Andreas Tille
Hi Dylan, OK, uploaded again Andreas. On Mon, Feb 16, 2015 at 07:10:27PM +0100, Dylan wrote: > Hi Andreas, > > 2015-02-16 8:58 GMT+01:00 Andreas Tille : > > > Did you pushed? Git log only knows changes up to > > > > commit 2ff0e3cf94c30ab830927b8761f18d18337f1cd4 > > Author: Dylan Aïssi >

Bug#778589: ITP: express -- Streaming quantification for high-throughput sequencing

2015-02-17 Thread Andreas Tille
Hi, On Tue, Feb 17, 2015 at 12:10:44PM +0100, Jérémy Lal wrote: > Le mardi 17 février 2015 à 03:07 +, Michael Crusoe a écrit : > > Package: wnpp > > Severity: wishlist > > Owner: Debian Med team > > X-Debbugs-Cc: debian-de...@lists.debian.org, debian-med@lists.debian.org > > > > * Package na

Re: DebConf15: Call for Sprints

2015-02-17 Thread Andreas Tille
[sorry for cross-posting - I have set Reply-To to debian-spri...@lists.debian.org, debian-ble...@lists.debian.org] Hi, as a response to the DebConf team announcement I have createt an entry at the Sprint wiki page: https://wiki.debian.org/Sprints/2015/Blends The idea is to gather people who

Bug#778589: ITP: express -- Streaming quantification for high-throughput sequencing

2015-02-17 Thread Jérémy Lal
Le mardi 17 février 2015 à 03:07 +, Michael Crusoe a écrit : > Package: wnpp > Severity: wishlist > Owner: Debian Med team > X-Debbugs-Cc: debian-de...@lists.debian.org, debian-med@lists.debian.org > > * Package name: express Hello, mind that "express" is probably a too generic name, a

Re: Update on Trinityrnaseq packaging

2015-02-17 Thread Andreas Tille
On Tue, Feb 17, 2015 at 09:50:35AM +0100, Andreas Tille wrote: > > > > - [ ] express > > > > Ready for sponsoring > > I'll have a look. I had a look and pushed some small changes to fix some lintian issues and uploaded. Thanks for your preparation Andreas. -- http://fam-tille.de -

Re: How to submit software for addition to BioLinux?

2015-02-17 Thread Andreas Tille
Hi Simon, On Tue, Feb 17, 2015 at 09:32:37AM +, Simon Sadedin wrote: > I guess I have a ³simple² question but it might be a bit of a showstopper > - Bpipe relies on a number of java libraries that are fetched in binary > form from online repositories at build time. If I understand Debian polic

Re: How to submit software for addition to BioLinux?

2015-02-17 Thread Simon Sadedin
Hi all, I guess I have a ³simple² question but it might be a bit of a showstopper - Bpipe relies on a number of java libraries that are fetched in binary form from online repositories at build time. If I understand Debian policy correctly, that is not allowable. I checked through the packages and

Re: Update on Trinityrnaseq packaging

2015-02-17 Thread Andreas Tille
Hi Michael, On Tue, Feb 17, 2015 at 03:46:09AM +, Michael Crusoe wrote: > On Mon Feb 16 2015 at 11:09:37 AM Andreas Tille wrote: > > > dependencies needing review & uploading to Debian: > > > - [ ] libjung-java > > Ready for sponsoring Uhmm, only for contrib since it depends libcolt-java. :