Hi, Dylan,
على الجمعـة 12 آب 2016 13:32، كتب Dylan:
> Hi,
> I have updated galileo. Could someone upload it to unstable?
>
Your d/watch file is not working properly with uscan. Is there a
particular reason that you have it pointing to the downloads page rather
than the tags?
Thanks and
Hello Andreas,
We use this mail for GSOC then subject can be stable.
At ncbi-tools6 issue i am looking it and give some info to you when i
finished. Thanks for Cd-hit i use it's manual for tests i look to it again
more careful.
Updated list like that:
ncbi-tools6
njplot
picard-tools
cd-hit
maq
Hi,
I have updated galileo. Could someone upload it to unstable?
Thank you.
Best regards,
Dylan
Hi Tin,
On Fri, Aug 12, 2016 at 03:30:25PM +, Duy Tin Truong wrote:
> > However the hint ot hclust2[1] is helpful. Unfortunately I can not find
> > any description for this software. Since you might have some influence on
> > this it would be great to provide a hint where I can find a
Hi Andreas,
> However the hint ot hclust2[1] is helpful. Unfortunately I can not find
> any description for this software. Since you might have some influence on
> this it would be great to provide a hint where I can find a description for
> a potential package.
>
hclust2 is used to plot
Hi Tin,
On Fri, Aug 12, 2016 at 01:56:39PM +, Duy Tin Truong wrote:
> Yes, that is fine for me. Just a small comment, metaphlan2-data will depend
> on bowtie2 so that you can have bowtie2 to convert the fasta file.
Yes, that's obvious.
> In addition, this is the list of dependencies for
Hi Andreas,
Yes, that is fine for me. Just a small comment, metaphlan2-data will depend
on bowtie2 so that you can have bowtie2 to convert the fasta file.
In addition, this is the list of dependencies for metaphlan2 in case you
need:
Hi Duy,
On Thu, Aug 11, 2016 at 05:03:20AM +, Duy Tin Truong wrote:
> We have discussed the plan but unfortunately, we do not have enough
> resource for that task now. In addition, redesigning the source structure
> requires us to change all tutorials and that is quite expensive for us and
>
Hi Canberk,
thanks for commiting the test for tigr-glimmer. It is uploaded now.
Here is the updated todo list
ncbi-tools6
-> You did not responded whether the hints by Aaron
were helpful.
njplot (according to manual there is an option without
For those who want to test: I've just pushed a patch using upstream
names and keeping the old names. The old names are intentionally
without manpages - so lintian will remember us that something should be
done here.
Kind regards
Andreas.
On Fri, Aug 12, 2016 at 12:52:36PM +0200, Andreas
Hi Sascha,
On Fri, Aug 12, 2016 at 11:27:44AM +0100, Sascha Steinbiss wrote:
> > Is there anybody who would
> > expect to find a /usr/bin/cdhit executable in any scripts or should we
> > rather rename to cd-hit to fit the upstream binary.
>
> I remember that I had to patch upstream code a couple
Hi Andreas,
[...]
> Is there anybody who would
> expect to find a /usr/bin/cdhit executable in any scripts or should we
> rather rename to cd-hit to fit the upstream binary.
I remember that I had to patch upstream code a couple of times to change
the name of the CD-HIT/CD-HIT-EST binaries to
Hi Alkes,
On Thu, Aug 11, 2016 at 11:01:56AM -0400, Alkes Price wrote:
> Thank you for flagging these issues. We have now released EIGENSOFT
> 6.1.3 with ploteig restored. We have elected to restore the use of
> .perl file names for PERL scripts for backwards compatibility.
Due to our watch
Hi again,
On Thu, Aug 11, 2016 at 08:34:30PM +0200, Andreas Tille wrote:
> Moved tigr-glimmer to Git. I'll answer more detailed tomorrow since I
> was offline today. Kind regards, Andreas.
As said this is done.
ncbi-tools6
-> You did not responded whether the hints by
Hi Canberk,
just a general remark: It would help if you change the subject of your
mails if it does not fit the content any more.
On Thu, Aug 11, 2016 at 08:10:30AM +0300, Canberk Koç wrote:
> I commit Cd-Hit according to it's manual but these example codes did not
> work also there is no
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