Re: vcftools

Le Tue, Aug 23, 2016 at 03:06:49PM +0100, Tony Travis a écrit : > > I need to process .vcf files with thousands of WGS scaffolds in them > instead of just a few chromosomes. The latest version of "vcftools" can > do this, but the version of "vcftools" currently in Bio-Linux 8/Ubuntu > 14.04 LTS is

vcftools

Hi, Andreas. I need to process .vcf files with thousands of WGS scaffolds in them instead of just a few chromosomes. The latest version of "vcftools" can do this, but the version of "vcftools" currently in Bio-Linux 8/Ubuntu 14.04 LTS is quite old: > root@wildcat:~# apt-cache policy vcftools > vc

[GSoC] Phyml test issues

Hi Canberk, I've uploaded maq even if the README.source is a bit short. You just gave an URL to the large data collection - it would be better do describe how exactly the example data were fetched. I had another look into phyml since upstream suggested to stick to the version currently in Debian

GSOC Final Evaluation

Hi Andreas, I made last evaluation here is the link if anyone want to look . https://docs.google.com/document/d/1LBj4Ys39_gxTVwLx8iJGJ8bqB_hCUG0qvQYFq9_-v0M/edit?usp=sharing Canberk Koç [image: https://]about.me/canberkkoc