Re: pbcommand new upstream

Hi Afif, thanks for getting back to me so quickly. >> What would you suggest, package the current version now that we need it? You >> have got more experience with the PB tools and how likely they are to break >> APIs across versions — do you think it’s a good idea? > > Yes, I think it should

Re: Please check packaging of new version of snakemake

Hi Andreas, On 17:58 09/01, Andreas Tille wrote: > Hi Kevin, > > I noticed that there is a new version of snakemake and I updated the Git > repository accordingly. Thanks, and sorry for not getting back to you till now. > Strangely enough I had to inject a hack to run the build time tests. Sin

Re: pbcommand new upstream

Hi, Sascha, على السبت 14 كانون الثاني 2017 ‫05:20، كتب Sascha Steinbiss: > Hi Afif, > > at the sprint I’m currently trying to update kineticsTools to a recent > version. However, it also requires a newer version of pbcommand, which we > missed to keep up-to-date as upstream are not tagging thei

Re: libzstd 1.1.2 contains embedded zlib fork

Hi all, On 16:50 13/01, Sascha Steinbiss wrote: > Hi Kevin, > > here on the Debian Med sprint Happy Sprint all! Shame I can't be there this year. > I was looking to update libzstd to the current upstream version 1.1.2. > Besides some minor changes to the patches I had to make, I also noticed th

Bug#851431: ITP: bart-view -- Image viewer for multi-dimensional data (add-on to BART)

Package: wnpp Severity: wishlist Owner: Martin Uecker * Package name: bart-view Version : 0.0.01 Upstream Author : Martin Uecker * URL : https://github.com/mrirecon/view/ * License : BSD Programming Lang: C Description : Image viewer for multi-dimensio

Re: Will you prepare update to bart 0.4.00

Hi Martin, I did som further partly cosmetic changes but the missing Build-Depends was a serious issue. I'd recommend to build at least once inside a pbuilder environment (Debian Policy describes how to setup). There is a remainig lintian issue I: bart: spelling-error-in-binary usr/bin/bart u

Re: Will you prepare update to bart 0.4.00

Hi Andreas, I updated the git repo to the new version. Thank you for sponsering! Martin Am Samstag, den 14.01.2017, 08:34 +0100 schrieb Andreas Tille: > Hi Martin, > > I noticed that there is a new release of bart. It might make sense to > upload it as quick as possible to make it into tes

pbcommand new upstream

Hi Afif, at the sprint I’m currently trying to update kineticsTools to a recent version. However, it also requires a newer version of pbcommand, which we missed to keep up-to-date as upstream are not tagging their GitHub releases [1]. It is possible to manually track the upstream versions by wa

Bug#851358: ITP: python-pybedtools -- Python wrapper around BEDTools for bioinformatics work

Package: wnpp Severity: wishlist Owner: Debian Med team * Package name: python-pybedtools Version : 0.7.8 Upstream Author : Ryan Dale * URL : https://github.com/daler/pybedtools * License : GPL 2+ Programming Lang: Python, Cython, Description : Python

Bug#851342: ITP: baitfisher -- package for designing hybrid enrichment probes

-- Forwarded message - From: olivier sallou Date: sam. 14 janv. 2017 à 09:27 Subject: Bug#851342: ITP: baitfisher -- package for designing hybrid enrichment probes To: sub...@bugs.debian.org Package: wnpp Severity: wishlist Owner: Olivier Sallou * Package name: baitfisher