Re: Bug#879886: Bug#879886: libhts2: libhts2 needs to handle ABI changes

Hi Mattia, On Fri, Nov 10, 2017 at 12:52:39PM +0100, Mattia Rizzolo wrote: > I force pushed a tag change for debian/1.5-2, as it pointed to something > that was not what was uploaded (bad tille!) Please always check what this tille-guy is doing! ;-) Thanks for fixing Andreas. --

Re: [Debian-med-packaging] Bug#879886: libhts2: libhts2 needs to handle ABI changes

On Thu, Nov 09, 2017 at 10:11:30PM -0500, Afif Elghraoui wrote: > On November 9, 2017 6:20:03 PM EST, Diane Trout wrote: > > > [...] > > > >Anyone want to review? or should I go ahead and release? > > I think you can release. Yes please release it, and IMHO close this bug with

Re: Bug#881317: RM: r-bioc-edger -- ROM; No chance to upgrade to latest version due to not fullfillable dependency from r-cran-locfit

Hi Michael, On Fri, Nov 10, 2017 at 12:07:27PM +0200, Michael Crusoe wrote: > Fine by me. Looks like it isn't needed by trinityrnaseq anymore, so that > build-depends can be dropped. Cool. Would you mind updating trinityrnaseq accordingly and upload. > Unfortunately it is a dependency on the

Re: Updating Build-Depends for R packages

On 10 November 2017 at 09:59, Andreas Tille wrote: > Just go ahead. :-) OK, pushed but not uploaded. I don't think these changes are worth uploads on their own. > We do not *yet* have a tool but I think dh-make-R could / should be > tweaked to enable updating a package (but

Bug#881317: RM: r-bioc-edger -- ROM; No chance to upgrade to latest version due to not fullfillable dependency from r-cran-locfit

Package: ftp.debian.org Severity: normal Hi, I'm opening this bug also for discussion on the Debian Med list. The situation with r-bioc-edger is the following: In the recent package locfit was only used for testing the package and the test was simply removed by a patch. In all later upstream

Re: Updating Build-Depends for R packages

Hi Graham, On Fri, Nov 10, 2017 at 09:00:28AM +0200, Graham Inggs wrote: > I noticed the following build failures in Ubuntu recently: > > r-bioc-genomicfeatures 1.30.0+dfsg-1 > Error : package ‘GenomicRanges’ 1.28.6 was found, but >= 1.29.14 is > required by ‘GenomicFeatures’ > >