Re: Do we need python-seqcluster (Python2) or is python3-seqcluster sufficient

2019-01-23 Thread Steffen Möller
Hello again, Just a quick update. On 23.01.19 12:42, Steffen Möller wrote: On 22.01.19 22:39, Andreas Tille wrote: On Tue, Jan 22, 2019 at 08:18:51PM +0100, Andreas Tille wrote: Hi Steffen, I was a bit scared that we have a non-installable package inside Debian yip. and thought it would

Re: making picard-tools and downstream packages amd64 only due to GKL

2019-01-23 Thread Andreas Tille
On Wed, Jan 23, 2019 at 03:48:17PM -0500, Michael Crusoe wrote: > I propose that we mark picard-tools/libpicard-java and all dependent > packages amd64 only due to its dependency on gkl (which is itself amd64 > only). > > This will unstick many package migrations. > > Shall I proceed? Please go

making picard-tools and downstream packages amd64 only due to GKL

2019-01-23 Thread Michael Crusoe
Hello, I propose that we mark picard-tools/libpicard-java and all dependent packages amd64 only due to its dependency on gkl (which is itself amd64 only). This will unstick many package migrations. Shall I proceed? -- Michael R. Crusoe

Re: Do we need python-seqcluster (Python2) or is python3-seqcluster sufficient

2019-01-23 Thread Steffen Möller
On 22.01.19 22:39, Andreas Tille wrote: On Tue, Jan 22, 2019 at 08:18:51PM +0100, Andreas Tille wrote: Hi Steffen, I was a bit scared that we have a non-installable package inside Debian yip. and thought it would be a good idea to have python-seqcluster quickly. yes I realised that some

Re: Help needed for discosnp

2019-01-23 Thread Andreas Tille
On Wed, Jan 23, 2019 at 09:05:47AM +0100, Olivier Sallou wrote: > > On 1/22/19 10:37 PM, Andreas Tille wrote: > > ... > > cd /build/discosnp-2.3.0/obj-x86_64-linux-gnu/tools/kissnp2 && > > /usr/bin/cmake -E cmake_link_script CMakeFiles/kissnp2.dir/link.txt > > --verbose=1 > > /usr/bin/c++ -g -O

Re: Help needed for discosnp

2019-01-23 Thread Olivier Sallou
On 1/22/19 10:37 PM, Andreas Tille wrote: > Hi Olivier, > > I've thought I'm so close to get at least discosnp[1] linked > against gatb-core but there is a final thing missing: > > > ... > cd /build/discosnp-2.3.0/obj-x86_64-linux-gnu/tools/kissnp2 && /usr/bin/cmake > -E cmake_link_script CMakeF