Re: [Help] Re: pbgenomicconsensus: autopkgtest regression

2019-04-07 Thread Andreas Tille
On Sun, Apr 07, 2019 at 02:08:54PM +0200, Liubov Chuprikova wrote: > I have just added python-pytest and one more missing library. Now the tests > should pass. Finally it passes now. Thanks a lot, Andreas. -- http://fam-tille.de

Re: [Help] Re: pbgenomicconsensus: autopkgtest regression

2019-04-07 Thread Liubov Chuprikova
Hi, On Sun, 7 Apr 2019 at 11:30, Graham Inggs wrote: > Hi Andeas > > On Sun, 7 Apr 2019 at 07:50, Andreas Tille wrote: > > I have no idea why command1 is failing. Anybody who can reproduce > > this test result and can fix this test? > > The output of command1 is the following: > > autopkgtest

tasks/bio: RRIDs+Topics not shown

2019-04-07 Thread Steffen Möller
Hi Andreas, Please kindly have a look. The EDAM files have a version identifier https://salsa.debian.org/med-team/bowtie2/blob/master/debian/upstream/edam behind the specification ("EDAM") of the ontology used - ancient 1.13 it is for that tool. Could you please have a look at the possibility

Re: [Help] Re: pbgenomicconsensus: autopkgtest regression

2019-04-07 Thread Graham Inggs
Hi Andeas On Sun, 7 Apr 2019 at 07:50, Andreas Tille wrote: > I have no idea why command1 is failing. Anybody who can reproduce > this test result and can fix this test? The output of command1 is the following: autopkgtest [15:39:43]: test command1: unset GZIP && cp -r Makefile tests $AUTOPKGT