Hello Andreas,
Thank you for this precious advice. The tip to run pdebuild when calling
gbp buildpackage definitely helps.
My next step was to try to build sight in pbuilder but I did not know
how to do so without camp being uploaded in unstable first... I just
found some documentation now f
Am Wed, Oct 20, 2021 at 12:13:35AM +0530 schrieb Nilesh Patra:
> > Its worth trying IMHO. Would you volunteer to do so?
>
> https://github.com/biocore/biom-format/issues/864 :-)
Thanks a lot for this.
> On the other spectrum, I kind of wonder that these could be good tasks for
> people/volunte
Snakemake is working for me with python3-connection-pool installed, so I
have uploaded.
Best,
Steffen
Forwarded Message
Subject:Bug#996868: ITP: python-connection-pool -- thread-safe
connection pool for python
Resent-Date:Wed, 20 Oct 2021 00:33:01 +
Resent-Fr
On Wed, 20 Oct 2021 at 03:32, Steffen Möller wrote:
> I just ran into this. Will package this with the Python team now.
>
Cool, meanwhile I hacked around, and got it to work somehow,
if you could please do a review and upload, that'd be great!
We can remove the hack when the new package connect
I just ran into this. Will package this with the Python team now.
On 19.10.21 23:40, Nilesh Patra wrote:
On Wed, 20 Oct 2021 at 00:57, Steffen Möller mailto:steffen_moel...@gmx.de>> wrote:
On 19.10.21 21:12, Nilesh Patra wrote:
> On 10/20/21 12:40 AM, Steffen Möller wrote:
>> Upd
On Wed, 20 Oct 2021 at 00:57, Steffen Möller wrote:
>
> On 19.10.21 21:12, Nilesh Patra wrote:
> > On 10/20/21 12:40 AM, Steffen Möller wrote:
> >> Update follows. There is an uninstallable file in the tests folders. I
> >> am now separating -tests and -doc.
> >
> > Thanks, but that'd go a trip t
On 19.10.21 21:12, Nilesh Patra wrote:
On 10/20/21 12:40 AM, Steffen Möller wrote:
Update follows. There is an uninstallable file in the tests folders. I
am now separating -tests and -doc.
Thanks, but that'd go a trip to NEW. It'd be nice if you can fix it in
the single-source
package only,
On 10/20/21 12:40 AM, Steffen Möller wrote:
Update follows. There is an uninstallable file in the tests folders. I
am now separating -tests and -doc.
Thanks, but that'd go a trip to NEW. It'd be nice if you can fix it in the
single-source
package only, for now. -- So as to not stall migration.
Update follows. There is an uninstallable file in the tests folders. I
am now separating -tests and -doc . And these .snakemake folders come
from installdocs, which is why all these removals failed. Getting there.
Best,
Steffen
On 19.10.21 20:17, Nilesh Patra wrote:
> Many thanks, Steffen :-)
>
On Tue, 19 Oct 2021 at 22:37, Andreas Tille wrote:
> > I wonder if it's a problem with the the version of h5py in the archive?
> > Because these seem to run fine upstream.
> >
> > Might be worth raising this problem upstream?
>
> Its worth trying IMHO. Would you volunteer to do so?
>
https://gi
Hi again,
after adding further Build-Depends I need to admit I have no idea
what is missing to solve:
-- Configuring io_igtl: /build/sight-21.0.0/libs/io/igtl
CMake Error at
/usr/share/cmake-3.21/Modules/FindPackageHandleStandardArgs.cmake:230 (message):
Could NOT find LibArchive (missing: Li
Hi Flavien,
Am Tue, Oct 19, 2021 at 04:16:13PM +0200 schrieb Flavien Bridault:
> Sorry, it seems I got it wrong all the way since the beginning. Actually I
> did not realize a new camp version was finally uploaded since the latest
> changes you and me made. Now I understand why I did not get the e
Hi,
Am Tue, Oct 19, 2021 at 08:24:59PM +0530 schrieb Nilesh Patra:
> > can be fixed with:
> >
> > self.assertIn(m['BODY_SITE'], ('GUT', 'SKIN'))
> > =>
> > self.assertIn(m['BODY_SITE'], (b'GUT', b'SKIN'))
> >
>
> or. a ".decode()" with m['BODY_SITE']
> :)
>
> I had ma
On Tue, 19 Oct, 2021, 8:15 pm olivier sallou,
wrote:
> On Mon, 2021-10-18 at 12:30 +0200, Andreas Tille wrote:
> > Hi,
> >
> > I wanted to update python-biom-format, but the build time test ends
> > up in
> >
> >
> > FAILED
> > biom/tests/test_table.py::TableTests::test_from_hdf5_custom_parsers -
On Mon, 2021-10-18 at 12:30 +0200, Andreas Tille wrote:
> Hi,
>
> I wanted to update python-biom-format, but the build time test ends
> up in
>
>
> FAILED
> biom/tests/test_table.py::TableTests::test_from_hdf5_custom_parsers -
can be fixed with:
self.assertIn(m['BODY_SITE'], ('GUT'
On Mon, 2021-10-18 at 12:30 +0200, Andreas Tille wrote:
> Hi,
>
> I wanted to update python-biom-format, but the build time test ends
> up in
>
>
> FAILED
> biom/tests/test_table.py::TableTests::test_from_hdf5_custom_parsers -
> ...
> FAILED
> biom/tests/test_table.py::TableTests::test_to_hdf
Hi Andreas,
Sorry, it seems I got it wrong all the way since the beginning. Actually
I did not realize a new camp version was finally uploaded since the
latest changes you and me made. Now I understand why I did not get the
error in my usual docker dev container, I simply used the previous ver
u...@debian.org (Aaron M. Ucko) writes:
> So I see. I've concocted and pushed two more patches, which in
> conjunction yield much saner results on my system; let's see how they do
> on Salsa CI. (Several apps were failing both because they wound up with
Still not quite there, alas:
>Runn
Hi Roland,
I've fixed relion watch file and updated the package relion to latest
upstream. Please care for relion-cuda since I can not test this.
Kind regards
Andreas.
--
http://fam-tille.de
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