Re: ncbi-igblast - compiles so much redundant general NCBI bits - wrong source tree?

Andreas Tille writes: > This hint enabled me to finally build the package. Unfortunately there Glad to hear it! > are lots of lintian errors[1]. I think I'll be able to deal with the > RUNPATH issues (if I would have time which is not the case the next > three days). Please try adding --with

Re: Help needed for dipy autopkgtest

On Tue, Mar 22, 2022 at 10:19:09PM +0100, Andreas Tille wrote: > I've updated dipy to latest upstream but the autopkgtest is failing[1]. > There are lots of own modules that are not found and I have no idea why. That is because it is trying to run tests in the source-tree itself and it does not se

Bug#1008128: ITP: gatk-fermilite -- interface to call Heng Li's fermi-lite assembler from Java code

Package: wnpp Severity: wishlist Owner: Debian-med team X-Debbugs-Cc: debian-de...@lists.debian.org, debian-med@lists.debian.org * Package name: gatk-fermilite Version : 1.2.1 Upstream Author : Broad Institute * URL : https://github.com/broadinstitute/gatk-fermilite-jn

Help needed for dipy autopkgtest

Hi, I've updated dipy to latest upstream but the autopkgtest is failing[1]. There are lots of own modules that are not found and I have no idea why. Since I'm basically AFK for the next three days I'd be happy if someone could come up with some solution. Kind regards Andreas. [1] https:

Re: ncbi-igblast - compiles so much redundant general NCBI bits - wrong source tree?

Hi Aaron, Am Mon, Mar 21, 2022 at 04:13:54PM -0400 schrieb Aaron M. Ucko: > Andreas Tille writes: > > > ERR [127] -- [util/lmdb] lmdb_test.sh 1 (unparsable timing stats) > > Please try declaring a build dependency on time. > > FTR, my previous suggestion (switching from --with-dll to --wi