On 12/17/18 11:07 AM, Andreas Tille wrote: > Hi, > > after I tried to follow the initial hint of Emmanuel I admit I was not > successful to finally build the package: > > On Wed, Oct 17, 2018 at 10:32:58AM +0200, Andreas Tille wrote: >>> Good catch. The latest upstream version of alter-sequence-alignment has >>> split these to an additional alter-lib.jar and the time of the build >>> failure of jmodeltest correlates with the upload of >>> alter-sequence-alignment 1.3.4-1. But now the question is: How to >>> teach the jmodeltest build system to use alter-lib.jar. I think adding >>> it to debian/manifest[1] is needed to *run* jmodeltest but it surely >>> does not help at build time. I have not found any place where the >>> build system specifies the needed jars. :-( >> I tried to add alter-lib.jar to build.xml[1]. Unfortunately this does >> not help to fix the issue >> >> [javac] >> /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/ModelTestService.java:28: >> error: package parser does not exist >> [javac] import parser.ParseException; >> [javac] ^ >> [javac] >> /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/ModelTestService.java:29: >> error: package converter does not exist >> [javac] import converter.Converter; >> [javac] ^ >> [javac] >> /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/ModelTestService.java:30: >> error: package converter does not exist >> [javac] import converter.DefaultFactory; >> [javac] ^ >> [javac] >> /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/ModelTestService.java:31: >> error: package converter does not exist >> [javac] import converter.Factory; >> >> Any hint how to get the classes in alter-lib.jar found?
I fixed the issue and pushed to git my patch d/patches/fix_alter-lib.patch The lib was used but the package name in alter-lib.jar is different. ModelTestService is patched to use correct package name >> Moreover I get lots of >> >> [javac] >> /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/Distributor.java:23: >> warning: [deprecation] Observable in java.util has been deprecated >> [javac] import java.util.Observable; >> [javac] ^ > Any more hints? > > Kind regards > > Andreas. > -- Olivier Sallou Univ Rennes, Inria, CNRS, IRISA Irisa, Campus de Beaulieu F-35042 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/326D8438 (keyring.debian.org) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438
