Re: Autopkgtest for Logol

2021-07-22 Thread Andreas Tille
Hi all, I did some polishing of the package (including repackaging to exclude compressed JS docs) and deactivated bkhc and reprotest for CI. This package should be uploaded once the new development cycle has started. Thanks to Shruti for the autopkgtest and pointing up issues. Kind regards

Re: Autopkgtest for Logol

2021-07-22 Thread Andreas Tille
Hi Pierre, On Wed, Jul 21, 2021 at 09:56:14PM +0200, Pierre Gruet wrote: > Replacing the invitations in your test with > > LogolExec -g 1799.logol -s 1799.fasta -dna > > solves the issue, and moreover it is perhaps more natural as I think this is > the typical invocation one would expect fro

Re: Autopkgtest for Logol

2021-07-21 Thread Pierre Gruet
Hi Shruti, Le 21/07/2021 à 17:18, Andreas Tille a écrit : Hi Shruti, On Wed, Jul 21, 2021 at 01:32:35PM +0530, Shruti Sridhar wrote: I am working on writing autopkgtests for logol [1] and the test passes in my chroot but fails the pipeline I could reproduce this locally with autopkgtest-vir

Re: Autopkgtest for Logol

2021-07-21 Thread olivier sallou
Le mer. 21 juil. 2021 à 17:18, Andreas Tille a écrit : > Hi Shruti, > > On Wed, Jul 21, 2021 at 01:32:35PM +0530, Shruti Sridhar wrote: > > > > I am working on writing autopkgtests for logol [1] and the test passes in > > my chroot but fails the pipeline > > Hmmm, this > > > + JAVA_OPTS=' -Xms512

Re: Autopkgtest for Logol

2021-07-21 Thread Andreas Tille
Hi Shruti, On Wed, Jul 21, 2021 at 01:32:35PM +0530, Shruti Sridhar wrote: > > I am working on writing autopkgtests for logol [1] and the test passes in > my chroot but fails the pipeline Hmmm, this + JAVA_OPTS=' -Xms512m -Xmx4096m' + java -Xms512m -Xmx1024m -Dlogol.install=/tmp/autopkgtest-l

Autopkgtest for Logol

2021-07-21 Thread Shruti Sridhar
Hello! I am working on writing autopkgtests for logol [1] and the test passes in my chroot but fails the pipeline along with blhc and reprotest. I tried fixing blhc like we did earlier with the Makefile patch but I don’t know where to begin in this kind of package. Could you point me in the righ