Re: Python-pysam 0.12 released, could someone please care?

2017-09-04 Thread Andreas Tille
Hi Afif, On Mon, Sep 04, 2017 at 12:00:08AM -0700, Afif Elghraoui wrote: > > Well, the build is still not successful. I've filed an issue upstream for one > set of test failures [1] and there is another test failure due to a > segmentation fault that needs some investigation. If it would be

Re: Python-pysam 0.12 released, could someone please care?

2017-09-04 Thread Afif Elghraoui
Hi, Andreas, On September 3, 2017 11:50:05 PM PDT, Andreas Tille wrote: >Hi Afif, > >I noticed that you commited some promising changes. They are depending >from bcftools 1.5 which is only in experimental. From my point of view >it makes sense to move bcftools 1.5 to unstable

Re: Python-pysam 0.12 released, could someone please care?

2017-09-04 Thread Andreas Tille
Hi Afif, On Tue, Aug 29, 2017 at 10:15:00PM -0700, Afif Elghraoui wrote: > >Could someone please care since I'm a bit offline-ish this week. > > I'll take a look maybe tonight or tomorrow. Thanks for the ping--I hadn't > been watching the releases. I noticed that you commited some promising

Re: Python-pysam 0.12 released, could someone please care?

2017-08-29 Thread Afif Elghraoui
On August 29, 2017 2:05:50 PM PDT, Andreas Tille wrote: > >Could someone please care since I'm a bit offline-ish this week. > I'll take a look maybe tonight or tomorrow. Thanks for the ping--I hadn't been watching the releases. regards Afif

Re: Python-pysam 0.12 released, could someone please care?

2017-08-29 Thread Olivier Sallou
- Mail original - > De: "Andreas Tille" <andr...@an3as.eu> > À: "Debian Med Project List" <debian-med@lists.debian.org> > Envoyé: Mardi 29 Août 2017 23:05:50 > Objet: Python-pysam 0.12 released, could someone please care? Can't test now,

Python-pysam 0.12 released, could someone please care?

2017-08-29 Thread Andreas Tille
Hi, I pushed new upstream version to Git but the build failed with: ... amd64-2.7/bcftools/vcfplugin.c.pysam.o -Wno-unused -Wno-strict-prototypes -Wno-sign-compare -Wno-error=declaration-after-statement bcftools/vcfplugin.c.pysam.c:27:10: fatal error: config.h: No such file or directory