Artemis (Was: QIIME and cytoscape)

Hi Tim, On Wed, Mar 26, 2014 at 04:16:00PM +, Tim Booth wrote: > So QIIME can produce network data and Cytoscape is the recommended tool > to explore this output, but actually QIIME never cares if Cytoscape is > there or not. Thanks for the clarification. > If you are prepared to tackle som

Re: QIIME and cytoscape

h all .jar dependencies into a binary deb file using "fakeroot dpkg -b ...". Running Lintian on this thing yields a fabulous 882 warnings ;-) As to how QIIME and Cytoscape relate, the answer is here: http://qiime.org/tutorials/making_cytoscape_networks.html So QIIME can produce network data

QIIME and cytoscape

Hi Tim, I realised that you added cytoscape as Suggests to the qiime package. I inspected the rudimentary packaging of cytoscape in SVN[1] and noticed that it is more or less unusable and totally outdated. I tried to have a look at cytoscape at Github[2] and learned that it contains of several m